BLASTX nr result

ID: Coptis25_contig00016342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016342
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631869.1| PREDICTED: uncharacterized protein LOC100261...   220   1e-55
emb|CBI17665.3| unnamed protein product [Vitis vinifera]              220   1e-55
ref|XP_002316029.1| predicted protein [Populus trichocarpa] gi|2...   211   7e-53
gb|ABK94063.1| unknown [Populus trichocarpa]                          211   7e-53
ref|XP_003577612.1| PREDICTED: uncharacterized protein LOC100834...   208   6e-52

>ref|XP_003631869.1| PREDICTED: uncharacterized protein LOC100261651 [Vitis vinifera]
          Length = 244

 Score =  220 bits (560), Expect = 1e-55
 Identities = 102/141 (72%), Positives = 120/141 (85%)
 Frame = +3

Query: 6   ELSEIFFKDGRPLDLEGLKNCMKNGYTYINGVESLLHNLKQNDYEMHAFTNYPIWYTLIE 185
           EL+  FFKDGR  DLEGLKNCM+ GY+YI GVE LL  LKQN+YEMHAFTNYPIWY +IE
Sbjct: 103 ELARKFFKDGRDFDLEGLKNCMRRGYSYIEGVEGLLRALKQNNYEMHAFTNYPIWYEMIE 162

Query: 186 EKLRISNYLSWTFCSCITGKRKPAADSYLEVLRRLEVDPASCVFIDDRMVNIEAAINAGM 365
           +KL++S +LSWTFCSC  GKRKP  D YLEVLR L+V+PASCVFIDDRM N+EAA + G+
Sbjct: 163 DKLKLSTFLSWTFCSCTIGKRKPEPDFYLEVLRHLDVEPASCVFIDDRMRNVEAAEDVGI 222

Query: 366 VGLHFKDAASLKQDLTLLGIE 428
           VGLHFK+A SL+QDL+LLGI+
Sbjct: 223 VGLHFKNADSLRQDLSLLGID 243


>emb|CBI17665.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  220 bits (560), Expect = 1e-55
 Identities = 102/141 (72%), Positives = 120/141 (85%)
 Frame = +3

Query: 6   ELSEIFFKDGRPLDLEGLKNCMKNGYTYINGVESLLHNLKQNDYEMHAFTNYPIWYTLIE 185
           EL+  FFKDGR  DLEGLKNCM+ GY+YI GVE LL  LKQN+YEMHAFTNYPIWY +IE
Sbjct: 75  ELARKFFKDGRDFDLEGLKNCMRRGYSYIEGVEGLLRALKQNNYEMHAFTNYPIWYEMIE 134

Query: 186 EKLRISNYLSWTFCSCITGKRKPAADSYLEVLRRLEVDPASCVFIDDRMVNIEAAINAGM 365
           +KL++S +LSWTFCSC  GKRKP  D YLEVLR L+V+PASCVFIDDRM N+EAA + G+
Sbjct: 135 DKLKLSTFLSWTFCSCTIGKRKPEPDFYLEVLRHLDVEPASCVFIDDRMRNVEAAEDVGI 194

Query: 366 VGLHFKDAASLKQDLTLLGIE 428
           VGLHFK+A SL+QDL+LLGI+
Sbjct: 195 VGLHFKNADSLRQDLSLLGID 215


>ref|XP_002316029.1| predicted protein [Populus trichocarpa] gi|222865069|gb|EEF02200.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  211 bits (537), Expect = 7e-53
 Identities = 98/144 (68%), Positives = 118/144 (81%)
 Frame = +3

Query: 3   MELSEIFFKDGRPLDLEGLKNCMKNGYTYINGVESLLHNLKQNDYEMHAFTNYPIWYTLI 182
           MEL+  FFKD R  DLEGLKNCM+ GY+YI+G+E LL NLK+N+YEMHAFTNYPIWY LI
Sbjct: 105 MELARKFFKDKRSFDLEGLKNCMRRGYSYIDGIEELLCNLKENNYEMHAFTNYPIWYRLI 164

Query: 183 EEKLRISNYLSWTFCSCITGKRKPAADSYLEVLRRLEVDPASCVFIDDRMVNIEAAINAG 362
           EEKL IS YLSWTFCSC+ GKRKP  D YLEV+R L+VDP SC+FIDDR+ N++AAI  G
Sbjct: 165 EEKLNISTYLSWTFCSCMIGKRKPDPDFYLEVIRHLKVDPTSCIFIDDRLRNVKAAIEIG 224

Query: 363 MVGLHFKDAASLKQDLTLLGIETS 434
           + GL FK+A  L+QDL+ +GI+ S
Sbjct: 225 INGLQFKNANLLRQDLSKMGIDIS 248


>gb|ABK94063.1| unknown [Populus trichocarpa]
          Length = 173

 Score =  211 bits (537), Expect = 7e-53
 Identities = 98/144 (68%), Positives = 118/144 (81%)
 Frame = +3

Query: 3   MELSEIFFKDGRPLDLEGLKNCMKNGYTYINGVESLLHNLKQNDYEMHAFTNYPIWYTLI 182
           MEL+  FFKD R  DLEGLKNCM+ GY+YI+G+E LL NLK+N+YEMHAFTNYPIWY LI
Sbjct: 26  MELARKFFKDKRSFDLEGLKNCMRRGYSYIDGIEELLCNLKENNYEMHAFTNYPIWYRLI 85

Query: 183 EEKLRISNYLSWTFCSCITGKRKPAADSYLEVLRRLEVDPASCVFIDDRMVNIEAAINAG 362
           EEKL IS YLSWTFCSC+ GKRKP  D YLEV+R L+VDP SC+FIDDR+ N++AAI  G
Sbjct: 86  EEKLNISTYLSWTFCSCMIGKRKPDPDFYLEVIRHLKVDPTSCIFIDDRLRNVKAAIEIG 145

Query: 363 MVGLHFKDAASLKQDLTLLGIETS 434
           + GL FK+A  L+QDL+ +GI+ S
Sbjct: 146 INGLQFKNANLLRQDLSKMGIDIS 169


>ref|XP_003577612.1| PREDICTED: uncharacterized protein LOC100834441 [Brachypodium
           distachyon]
          Length = 254

 Score =  208 bits (529), Expect = 6e-52
 Identities = 92/144 (63%), Positives = 114/144 (79%)
 Frame = +3

Query: 6   ELSEIFFKDGRPLDLEGLKNCMKNGYTYINGVESLLHNLKQNDYEMHAFTNYPIWYTLIE 185
           EL++ FF DGR  DLEGLK+CM   Y Y++GVE +L +LK+N+YEMH FTNYP+WY LIE
Sbjct: 101 ELAKKFFNDGRSFDLEGLKDCMVRAYEYVDGVEDILRSLKKNNYEMHTFTNYPVWYQLIE 160

Query: 186 EKLRISNYLSWTFCSCITGKRKPAADSYLEVLRRLEVDPASCVFIDDRMVNIEAAINAGM 365
           EKL++S YLSWTFCSC  GKRKP+ D YL  +  L +DP +C+FIDDRMVNIEAA++ GM
Sbjct: 161 EKLKLSEYLSWTFCSCQIGKRKPSCDFYLHAVNHLSIDPGNCIFIDDRMVNIEAALSVGM 220

Query: 366 VGLHFKDAASLKQDLTLLGIETSP 437
           VGLHFKDA  LK DL  +G+E +P
Sbjct: 221 VGLHFKDAEVLKNDLFSVGVELAP 244


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