BLASTX nr result
ID: Coptis25_contig00016325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016325 (640 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel prot... 99 5e-19 ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel prot... 99 7e-19 ref|XP_003592677.1| mscS family protein, putative [Medicago trun... 86 6e-15 ref|XP_004144925.1| PREDICTED: mechanosensitive ion channel prot... 81 1e-13 ref|XP_002889201.1| mechanosensitive ion channel domain-containi... 80 3e-13 >ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis sativus] Length = 923 Score = 99.4 bits (246), Expect = 5e-19 Identities = 81/233 (34%), Positives = 114/233 (48%), Gaps = 27/233 (11%) Frame = +2 Query: 14 SFKQVQTKISGNGVQHQHQKLESQPILSDLDD---LKCESSGRRDIVLNIN-SDVEVSRE 181 S+K V+ K+SG H+ L PILSD +SS R+++++ ++ +D R Sbjct: 13 SYKYVR-KLSGADATQDHEHL---PILSDHQHSIMAVSDSSDRKEVIVKVDEADASTLRA 68 Query: 182 VDNNNNNSGSTIWRGSSYDFWSDHXXXXXXXXXVVAGNSSNEDGFDFKNN--NVEDPPSK 355 D N + TIWR SSYDFW+D G + D F+F+ + +VEDPPSK Sbjct: 69 TDLVNGSG--TIWRESSYDFWNDSDNRRNYGE----GGAKTTDDFEFRQHRKDVEDPPSK 122 Query: 356 LIGKFLHRQKASGEIAXXXXXXXXXXSEAVVGNSGLQAIQEVPF--SPKEAKVSFR---E 520 LIG+FLH+QKASGE++ E + L + E P S +E KVSF E Sbjct: 123 LIGQFLHKQKASGEMSLDMDMEML---ELPQDKTPLSTVAESPMRRSSRELKVSFESISE 179 Query: 521 QGENWS----------------PSPEAVHRRSNGSVPEEGRGGEVLRCTSNNA 631 EN S P RR++GS E+ EVLRC+SN++ Sbjct: 180 ISENDSMRRRHRDSPLDEEHRGQQPRQCDRRAHGSNGEDDGAAEVLRCSSNSS 232 >ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis sativus] Length = 923 Score = 99.0 bits (245), Expect = 7e-19 Identities = 81/232 (34%), Positives = 113/232 (48%), Gaps = 27/232 (11%) Frame = +2 Query: 14 SFKQVQTKISGNGVQHQHQKLESQPILSDLDD---LKCESSGRRDIVLNIN-SDVEVSRE 181 S+K V+ K+SG H+ L PILSD +SS R+++++ ++ +D R Sbjct: 13 SYKYVR-KLSGADATQDHEHL---PILSDHQHSIMAVSDSSDRKEVIVKVDEADASTLRA 68 Query: 182 VDNNNNNSGSTIWRGSSYDFWSDHXXXXXXXXXVVAGNSSNEDGFDFKNN--NVEDPPSK 355 D N + TIWR SSYDFW+D G + D F+F+ + +VEDPPSK Sbjct: 69 TDLVNGSG--TIWRESSYDFWNDSDNRRNYGE----GGAKTTDDFEFRQHRKDVEDPPSK 122 Query: 356 LIGKFLHRQKASGEIAXXXXXXXXXXSEAVVGNSGLQAIQEVPF--SPKEAKVSFR---E 520 LIG+FLH+QKASGE++ E + L + E P S +E KVSF E Sbjct: 123 LIGQFLHKQKASGEMSLDMDMEML---ELPQDKTPLSTVAESPMRRSSRELKVSFESISE 179 Query: 521 QGENWS----------------PSPEAVHRRSNGSVPEEGRGGEVLRCTSNN 628 EN S P RR++GS E+ EVLRC+SN+ Sbjct: 180 ISENDSMRRRHRDSPLDEEHRGQQPRQCDRRAHGSNGEDDGAAEVLRCSSNS 231 >ref|XP_003592677.1| mscS family protein, putative [Medicago truncatula] gi|355481725|gb|AES62928.1| mscS family protein, putative [Medicago truncatula] Length = 926 Score = 85.9 bits (211), Expect = 6e-15 Identities = 78/248 (31%), Positives = 107/248 (43%), Gaps = 35/248 (14%) Frame = +2 Query: 2 SLKKSFKQVQTKISGNG----VQHQHQKLESQPILSDLDDLKCESSGRRDIVLNINSDVE 169 ++KKSFK ++ + + H++L PIL D D+V+ IN D Sbjct: 3 TIKKSFKSYASQNNKHSRKFSADSDHEQL---PILHDRQHSSRSFPMAGDVVVKINDDGG 59 Query: 170 VSREVDNNNNNSGSTIWRGSSYDFWSDHXXXXXXXXXVVAGNSSNEDGFDFKNN-NVEDP 346 + +N IWR SSYDFW+D G++ ++ FDF+N +EDP Sbjct: 60 EPSQANNK-------IWRESSYDFWND------------TGDNVRDESFDFRNKAKLEDP 100 Query: 347 PSKLIGKFLHRQKASGEIAXXXXXXXXXXSEAVVGNSG-LQAIQEVP-FSPKEAKVSFRE 520 PS+LIGKFLH+Q+ASG++ G G L ++E P +E KVSF E Sbjct: 101 PSQLIGKFLHKQRASGDMLLDMDLEMEELQNEGNGADGKLTPVEESPTVIQRELKVSFEE 160 Query: 521 QGENW------------------SPS----------PEAVHRRSNGSVPEEGRGGEVLRC 616 N SPS P RRS G EVLRC Sbjct: 161 PASNSNGIDAVVNDPVRRRHSKDSPSMGEYARPPQPPNHDRRRSPSPAGHGGGDCEVLRC 220 Query: 617 TSNNASFK 640 S+NASF+ Sbjct: 221 -SSNASFE 227 >ref|XP_004144925.1| PREDICTED: mechanosensitive ion channel protein 6-like [Cucumis sativus] gi|449529323|ref|XP_004171649.1| PREDICTED: mechanosensitive ion channel protein 6-like [Cucumis sativus] Length = 955 Score = 81.3 bits (199), Expect = 1e-13 Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 29/230 (12%) Frame = +2 Query: 2 SLKKSFK---------QVQTKISGNGVQHQ-------HQKLESQPILSDLDDLK-CESSG 130 +LKKSFK ++ +G+ + H+ HQ + L D + ++S Sbjct: 3 TLKKSFKGNVSFKHTRKISAGGAGSEINHEELPILLNHQTTDHSRCLRDRHPVNDSDTSD 62 Query: 131 RRDIVLNIN---SDVEVSREVDNNNNNSGSTIWRGSSYDFWSDHXXXXXXXXXVVAGNSS 301 R +++L I+ S VSR +D+ NN G+ +WR S YDFW++ + G++S Sbjct: 63 RTEVILKIDGGGSSSAVSRSLDSAGNNGGN-VWRESRYDFWNNDEIGIGESARM--GDNS 119 Query: 302 NED---GFDFKNNN--VEDPPSKLIGKFLHRQKASGEIAXXXXXXXXXXSEAVVGNSGLQ 466 D GF+F +EDPP+KLIG FL +QK GE E + N + Sbjct: 120 GVDRNEGFEFVQTGYGMEDPPTKLIGDFLCKQKIEGETT----LDMDLEMEELKPNRIVP 175 Query: 467 AIQEVPFS--PKEAKVSFREQGENWSPSPEAVHRRSNGS--VPEEGRGGE 604 + E P S K+ KVSF+ S + +++ RR+ S + EE +GG+ Sbjct: 176 PLAESPLSQTSKDLKVSFQHDSTEISSNDQSIRRRNRDSNDLKEESKGGQ 225 >ref|XP_002889201.1| mechanosensitive ion channel domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335042|gb|EFH65460.1| mechanosensitive ion channel domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 857 Score = 80.1 bits (196), Expect = 3e-13 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 14/183 (7%) Frame = +2 Query: 119 ESSGRRDIVLNINSDVEVSREVDNNNNNSGST---IWRGSSYDFWSDHXXXXXXXXXVVA 289 +S+ RR++++ I+ D NN SG T IWR SYDFW+D A Sbjct: 4 DSADRREVIVKIDGD---------NNGVSGETVGRIWRDGSYDFWTDGEGNLNKGHNAAA 54 Query: 290 GNSSN---------EDGFDFKNNNVEDPPSKLIGKFLHRQKASGEIAXXXXXXXXXXSEA 442 +S ++GF+F+ EDPP+KLIG+FLH+Q+ASGEI + Sbjct: 55 VDSDRSAATTEEQQDEGFEFRRG--EDPPTKLIGQFLHKQQASGEICL----------DM 102 Query: 443 VVGNSGLQA--IQEVPFSPKEAKVSFREQGENWSPSPEAVHRRSNGSVPEEGRGGEVLRC 616 +G LQ+ + V SP AKV + P+ V RR + S GEV++C Sbjct: 103 DLGMDELQSRGLTPVSESPTSAKVP--------TKPPDPVGRRDSRSNNNNNDDGEVVKC 154 Query: 617 TSN 625 + N Sbjct: 155 SGN 157