BLASTX nr result

ID: Coptis25_contig00016295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016295
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138819.1| PREDICTED: uncharacterized protein LOC101219...    65   2e-08
ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    57   3e-08
ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    44   7e-08
ref|XP_002526725.1| conserved hypothetical protein [Ricinus comm...    61   2e-07
ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252...    54   3e-07

>ref|XP_004138819.1| PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus]
          Length = 382

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +3

Query: 120 FVDYICLWG*RSLYIWDLKLEAYMSFGW*EEVI-SMFKKLRYGGFGEEVQFSTRFLFEYP 296
           F++ +C+    S   W  KL  + S+GW +E   SMF K        E        F   
Sbjct: 240 FINGLCIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMN 299

Query: 297 ELD*R*FCLERRNVIFINLSFEKRVFPRCYLLQMLISKGLLS*NSSGQALRVAEDVFLAK 476
           + D     + R  ++ I LSFEKRV PR  +LQ LISKGL+   S G AL+++E  FL K
Sbjct: 300 KWDWTREEIYRYPIVLI-LSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEK 358

Query: 477 YVIKFQHEEP 506
           +V+++  E+P
Sbjct: 359 FVMQYLSEDP 368


>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 56.6 bits (135), Expect(2) = 3e-08
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = +3

Query: 165 WDLKLEAYMSFGW*EE-VISMFKKLRYGGFGEEVQFSTRFLFEYPELD*R*FCLERRNVI 341
           W+ K+  + SFGW EE  I++F K        E +      F   EL+     + +  ++
Sbjct: 237 WESKVSVFRSFGWGEEEFIALFVKQPQFMSNSETRIRKCLDFLINELNWMPEDIFKYPMV 296

Query: 342 FINLSFEKRVFPRCYLLQMLISKGLLS*NSSGQALRVAEDVFLAKYVIKFQHEEP 506
            + LS EKRV PR  +LQ+LI KGL++  S G+AL ++ED F+  ++  ++ + P
Sbjct: 297 LL-LSLEKRVVPRSRVLQLLIGKGLVTRRSIGRALIISEDRFMKVFMSSYEKKIP 350



 Score = 27.7 bits (60), Expect(2) = 3e-08
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +2

Query: 5   ISKLIIKNLRVLYV*SNKFRTIVLELKNMGFSPSIKVVVRGLHMPVGIKK 154
           I +++I   R L   +++F+ I+  +K MGF     + + G+    G+KK
Sbjct: 185 ILRMLILRPRTLSFNADEFKAILKRVKEMGFDEKGMMFIHGMCALCGMKK 234


>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 44.3 bits (103), Expect(3) = 7e-08
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 345 INLSFEKRVFPRCYLLQMLISKGLLS*NSS-GQALRVAEDVFLAKYVIKFQHEEP 506
           ++ S EKR+ PRC + ++LI KGL+  +   G  LR  E  FL ++VIK+Q+  P
Sbjct: 330 LSYSLEKRIIPRCSVARVLILKGLVKKDMGLGAFLRFTEKKFLDRFVIKYQNHIP 384



 Score = 35.8 bits (81), Expect(3) = 7e-08
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 14  LIIKNLRVLYV*SNKFRTIVLELKNMGFSPSIKVVVRGLHMPVGIKKPIY 163
           LI     V+ V  +KF  IV E+  MGF P   V ++ +H+  G+ KP +
Sbjct: 221 LITHYSNVVQVKHDKFHEIVKEVMEMGFDPLKMVFIKAIHVLAGMSKPTW 270



 Score = 21.9 bits (45), Expect(3) = 7e-08
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 241 MEVSVKKFNLALDFFLNILNW 303
           M +S KK    +DF +N + W
Sbjct: 298 MSLSEKKIMSTMDFLVNKMGW 318


>ref|XP_002526725.1| conserved hypothetical protein [Ricinus communis]
           gi|223533914|gb|EEF35639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
 Frame = +3

Query: 165 WDLKLEAYMSFGW*EEVISMFKKLRYGGFGEEVQFSTRFLFEYPELD*R*FCLERRNV-- 338
           W+ K + Y  +GW +E   +     +G F   + +S + + +  +        +  ++  
Sbjct: 309 WEKKFDIYKKWGWSQEETLVV----FGKFPWVMMYSEKKIMKMMDYYINKMGWDSSSIAK 364

Query: 339 --IFINLSFEKRVFPRCYLLQMLISKGLLS*NSSGQALRVAEDVFLAKYVIKFQHEEP 506
             + I+LS EKRV PRC ++Q+L+SKGL+   S   +LR++E++FL K+V  ++ E P
Sbjct: 365 HPLLISLSLEKRVIPRCSVIQVLLSKGLVRLTSLATSLRISEELFLHKFVRPYKEEAP 422


>ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252802 [Vitis vinifera]
          Length = 399

 Score = 54.3 bits (129), Expect(2) = 3e-07
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +3

Query: 165 WDLKLEAYMSFGW*EEVISM-FKKLRYGGFGEEVQFSTRFLFEYPELD*R*FCLERRNVI 341
           W+ K++AY  +GW EE I + F KL       E +      F   ++  R   L  R  +
Sbjct: 259 WERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMG-RESSLIARRPL 317

Query: 342 FINLSFEKRVFPRCYLLQMLISKGLLS*NSSGQAL-RVAEDVFLAKYVIKFQHEEP 506
            I LS EKR+ PR  ++Q+L+SKGL+  ++S   L    E +FL K+V  F+ E P
Sbjct: 318 LIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAP 373



 Score = 26.6 bits (57), Expect(2) = 3e-07
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 5   ISKLIIKNLRVLYV*SNKFRTIVLELKNMGFSPSIKVVVRGLH 133
           I+ L++       V  N FR  + E+K MGF+PS    V  +H
Sbjct: 207 IAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIH 249


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