BLASTX nr result

ID: Coptis25_contig00016289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016289
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive tran...   291   2e-76
emb|CBI36586.3| unnamed protein product [Vitis vinifera]              278   1e-72
ref|XP_002512756.1| conserved hypothetical protein [Ricinus comm...   265   1e-68
ref|XP_002528384.1| conserved hypothetical protein [Ricinus comm...   253   3e-65
ref|XP_003524030.1| PREDICTED: AP2-like ethylene-responsive tran...   248   1e-63

>ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060 [Vitis vinifera]
          Length = 347

 Score =  291 bits (744), Expect = 2e-76
 Identities = 152/249 (61%), Positives = 173/249 (69%), Gaps = 3/249 (1%)
 Frame = -3

Query: 845 WGRETILNFPVSTYXXXXXXXXXXXXXEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 666
           WG ETILNFP+STY             EYIGSLRR+SSGFSRGVSKYRGVARHHHNGRWE
Sbjct: 99  WGPETILNFPLSTYEKELKEMEGLSREEYIGSLRRRSSGFSRGVSKYRGVARHHHNGRWE 158

Query: 665 ARIGRVFGNKYLYLGXXXXXXXXXXXYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPI 486
           ARIGRVFGNKYLYLG           YDMAAIEYRGLNAVTNFDLSRYIKWL+PN  +P 
Sbjct: 159 ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNPC 218

Query: 485 INDSSP--DSHLNPNPNHEFEIGFLNH-QTSITSKVLEXXXXXXXXXXXXXXXXXXXXXX 315
              ++P  DS+L PNPNH+F I FLNH QTS T+   E                      
Sbjct: 219 EQPNNPNLDSNLTPNPNHDFGISFLNHPQTSGTAACSEPPLTQTRPPIASSALGLLLQSS 278

Query: 314 KFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSFSS 135
           KFKEM+E T+A D+ STPPES  P+CSFP+++QTYF+CQDS SY EG+DVIF +LNSF  
Sbjct: 279 KFKEMMEMTTAADHLSTPPESELPRCSFPDDIQTYFECQDSGSYEEGDDVIFSELNSFIP 338

Query: 134 PMFEHELDA 108
           PMF+ +  A
Sbjct: 339 PMFQCDFSA 347


>emb|CBI36586.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  278 bits (711), Expect = 1e-72
 Identities = 147/249 (59%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 845 WGRETILNFPVSTYXXXXXXXXXXXXXEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 666
           WG ETILNFP+STY             EYIGSLRR+SSGFSRGVSKYRGVARHHHNGRWE
Sbjct: 102 WGPETILNFPLSTYEKELKEMEGLSREEYIGSLRRRSSGFSRGVSKYRGVARHHHNGRWE 161

Query: 665 ARIGRVFGNKYLYLGXXXXXXXXXXXYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPI 486
           ARIGRVFGNKYLYLG           YDMAAIEYRGLNAVTNFDLSRYIKWL+PN  +P 
Sbjct: 162 ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNPC 221

Query: 485 INDSSP--DSHLNPNPNHEFEIGFLNH-QTSITSKVLEXXXXXXXXXXXXXXXXXXXXXX 315
              ++P  DS+L PNPNH+F I FLNH QTS T+                          
Sbjct: 222 EQPNNPNLDSNLTPNPNHDFGISFLNHPQTSGTAAC------------------------ 257

Query: 314 KFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSFSS 135
              +M+E T+A D+ STPPES  P+CSFP+++QTYF+CQDS SY EG+DVIF +LNSF  
Sbjct: 258 ---KMMEMTTAADHLSTPPESELPRCSFPDDIQTYFECQDSGSYEEGDDVIFSELNSFIP 314

Query: 134 PMFEHELDA 108
           PMF+ +  A
Sbjct: 315 PMFQCDFSA 323


>ref|XP_002512756.1| conserved hypothetical protein [Ricinus communis]
           gi|223547767|gb|EEF49259.1| conserved hypothetical
           protein [Ricinus communis] gi|441477735|dbj|BAM75180.1|
           AP2-type transcription factor [Ricinus communis]
          Length = 330

 Score =  265 bits (676), Expect = 1e-68
 Identities = 142/249 (57%), Positives = 167/249 (67%), Gaps = 4/249 (1%)
 Frame = -3

Query: 845 WGRETILNFPVSTYXXXXXXXXXXXXXEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 666
           WG++TILNFP+STY             EYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE
Sbjct: 84  WGQDTILNFPLSTYEEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 143

Query: 665 ARIGRVFGNKYLYLGXXXXXXXXXXXYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPI 486
           ARIGRVFGNKYLYLG           YDMAAIEYRGLNAVTNFDLSRYIKWLRPN  +P 
Sbjct: 144 ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPN--NPQ 201

Query: 485 INDSSPDSHLNPNPNHEFEIGFLNHQTSITSKVLE----XXXXXXXXXXXXXXXXXXXXX 318
            N +S D++  PNP  +  + F  H  S T+                             
Sbjct: 202 ENPTS-DANPMPNPTQDLGLTFTAHHQSSTATAETTMPLPTCGGGGGGSASSALGLLLQS 260

Query: 317 XKFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSFS 138
            KFKEMLERTSA D P TPPES PP+ SFP+++QT+FDCQD+ S+ EG+D+IF +L++F+
Sbjct: 261 TKFKEMLERTSANDCPMTPPESEPPRRSFPDDIQTFFDCQDTGSFTEGDDIIFGELDAFA 320

Query: 137 SPMFEHELD 111
           SP+F  EL+
Sbjct: 321 SPIFHCELN 329


>ref|XP_002528384.1| conserved hypothetical protein [Ricinus communis]
           gi|223532172|gb|EEF33977.1| conserved hypothetical
           protein [Ricinus communis] gi|441477733|dbj|BAM75179.1|
           AP2-type transcription factor [Ricinus communis]
          Length = 327

 Score =  253 bits (647), Expect = 3e-65
 Identities = 141/264 (53%), Positives = 159/264 (60%), Gaps = 23/264 (8%)
 Frame = -3

Query: 845 WGRETILNFPVSTYXXXXXXXXXXXXXEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 666
           WGRETILNFP+STY             EYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE
Sbjct: 64  WGRETILNFPLSTYENELREMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 123

Query: 665 ARIGRVFGNKYLYLGXXXXXXXXXXXYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPI 486
           ARIGRVFGNKYLYLG           YDMAAIEYRGLNAVTNFDLSRYIKWL+PNP D I
Sbjct: 124 ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNPNDNI 183

Query: 485 INDSSPDSHLNPNP----------------NHEFEIGFLNHQTSI-------TSKVLEXX 375
            N +    H NPNP                N E  + +L  Q +        T+ ++E  
Sbjct: 184 KNFNDQHHHPNPNPKPNIGTNSSTTPYPGPNQELGLSYLQTQNTYQPAAGDTTAVMVEPS 243

Query: 374 XXXXXXXXXXXXXXXXXXXXKFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQD 195
                                FKEM+E TS  D PSTP E   P+  FPE++QT+F+C D
Sbjct: 244 RHPANATSALGLLLQSSK---FKEMMEMTSMVDCPSTPAELEQPQSRFPEDIQTFFECPD 300

Query: 194 SDSYVEGNDVIFWDLNSFSSPMFE 123
           S SY EG+D+IF DLNSF   MF+
Sbjct: 301 SSSYGEGDDMIFGDLNSFVPQMFQ 324


>ref|XP_003524030.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Glycine max]
          Length = 347

 Score =  248 bits (633), Expect = 1e-63
 Identities = 133/246 (54%), Positives = 156/246 (63%), Gaps = 6/246 (2%)
 Frame = -3

Query: 845 WGRETILNFPVSTYXXXXXXXXXXXXXEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 666
           WG++TILNFP+STY             EYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE
Sbjct: 99  WGQDTILNFPLSTYQNELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWE 158

Query: 665 ARIGRVFGNKYLYLGXXXXXXXXXXXYDMAAIEYRGLNAVTNFDLSRYIKWLRPNPTDPI 486
           ARIGRVFGNKYLYLG           YDMAAIEYRG+NAVTNFDLSRYIKWL+PN  +  
Sbjct: 159 ARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGVNAVTNFDLSRYIKWLKPNNNNTT 218

Query: 485 IN----DSSPDSHLN--PNPNHEFEIGFLNHQTSITSKVLEXXXXXXXXXXXXXXXXXXX 324
           +N    DS+P+   N   N N +    F N Q S  ++  E                   
Sbjct: 219 VNSNLIDSNPNCETNFTSNSNQQQGFNFFNRQESFNNE--EAAMTQPRPAVATSALGLLL 276

Query: 323 XXXKFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNS 144
              KFKEM+E TSA D  + P ES  P C+FP+++QTYF+C+DS  Y EG+D++F  LN 
Sbjct: 277 QSSKFKEMMEMTSATDLSTPPSESELPSCTFPDDIQTYFECEDSHRYGEGDDIMFSVLNG 336

Query: 143 FSSPMF 126
           F  PMF
Sbjct: 337 FVPPMF 342


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