BLASTX nr result

ID: Coptis25_contig00016284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016284
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265...    71   1e-10
emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]    71   1e-10
ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263...    70   2e-10
emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]    68   7e-10

>ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|222843127|gb|EEE80674.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
 Frame = -3

Query: 282 MVKKMRFEWNPCSLVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPI---SVEQVEKP 112
           MVK+MR + NP SL +K+N VI KFAV+F L+GLAFRLL S S  +  +   SV   E+ 
Sbjct: 1   MVKEMRSDLNPFSL-SKHNSVIIKFAVSFLLVGLAFRLLISGSFRFSSVVETSVPANEET 59

Query: 111 SVESLVLPAPTLVSSEILQAG-DQNAQKEKCDIFTGDW 1
             ESL+   P   +S   +A   QN+Q  KCD+FTG+W
Sbjct: 60  KPESLMASLPEEPASNDFEANKSQNSQSGKCDLFTGEW 97


>ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera]
           gi|297742310|emb|CBI34459.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = -3

Query: 282 MVKKMRFEWNPCSLVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKPSVE 103
           MVK M   W   SL +K+NH++ K AV+  LMGLAFRLL+ HS   +P      E P VE
Sbjct: 1   MVKNMGLNWRLWSL-HKHNHLLVKVAVSILLMGLAFRLLFVHST--VP------ETPFVE 51

Query: 102 SLVLPAPTLVSSEILQAGDQNAQK---EKCDIFTGDW 1
             V+P P  VS ++ +  D   +K   EKCD+FTGDW
Sbjct: 52  KPVIPNPP-VSEDVPEIRDPIPEKVVAEKCDLFTGDW 87


>emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]
          Length = 420

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/90 (46%), Positives = 55/90 (61%)
 Frame = -3

Query: 270 MRFEWNPCSLVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKPSVESLVL 91
           M   W   SL +K+NH++ K AV+  LMGLAFRLL+ HS   +P      E P VE  V+
Sbjct: 1   MGLNWRLWSL-HKHNHLLVKVAVSILLMGLAFRLLFVHST--VP------ETPFVEKPVI 51

Query: 90  PAPTLVSSEILQAGDQNAQKEKCDIFTGDW 1
           P P  VS ++ +  D   +KEKCD+FTGDW
Sbjct: 52  PNPP-VSEDVPEIRDPIPEKEKCDLFTGDW 80


>ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera]
          Length = 450

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 17/111 (15%)
 Frame = -3

Query: 282 MVKKMRFEWNPCSLVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKP--- 112
           MV++MRFE NP SL +++NH   K A+ F LMGLA RL +S SI +   +V+ VE P   
Sbjct: 1   MVQEMRFEMNPFSL-HQHNHTFVKCALCFVLMGLAVRLWFSDSIRF-SSAVDSVETPPEG 58

Query: 111 SVESLV------------LPAPTLVSSEILQAGDQNAQKE--KCDIFTGDW 1
             ESL             LP  T VS +     +Q +QK+  KCDIFTGDW
Sbjct: 59  KTESLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDW 109


>emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]
          Length = 486

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 17/110 (15%)
 Frame = -3

Query: 279 VKKMRFEWNPCSLVNKNNHVIAKFAVTFFLMGLAFRLLYSHSIGYLPISVEQVEKP---S 109
           V++MRFE NP SL +++NH   K A+ F LMGLA RL +S SI +   +V+ VE P    
Sbjct: 39  VREMRFEMNPFSL-HQHNHTFVKCALCFVLMGLAVRLWFSDSIRF-SSAVDSVETPPEGK 96

Query: 108 VESLV------------LPAPTLVSSEILQAGDQNAQKE--KCDIFTGDW 1
            ESL             LP  T VS +     +Q +QK+  KCDIFTGDW
Sbjct: 97  TESLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDW 146


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