BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016275
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   141   2e-31
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              141   2e-31
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   141   2e-31
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   135   2e-29
ref|XP_002298425.1| predicted protein [Populus trichocarpa] gi|2...   134   4e-29

>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score =  141 bits (356), Expect = 2e-31
 Identities = 66/96 (68%), Positives = 79/96 (82%)
 Frame = -1

Query: 290 DDYRSFNYG*TSV*LEQKTGDFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLKY 111
           DD+ S+N          +  DF+Y V+SQSPT+HF+IH+RKALLNGISPA NRK+PPLKY
Sbjct: 146 DDHDSYN----------ELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKY 195

Query: 110 EYYFGLLRDFPELQFTLNGGITCIDEVNAARRQGAH 3
           EYYFGLLRDFP+L+FT+NGGI C+DEVNAA RQGAH
Sbjct: 196 EYYFGLLRDFPDLRFTINGGINCVDEVNAALRQGAH 231


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  141 bits (356), Expect = 2e-31
 Identities = 66/96 (68%), Positives = 79/96 (82%)
 Frame = -1

Query: 290 DDYRSFNYG*TSV*LEQKTGDFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLKY 111
           DD+ S+N          +  DF+Y V+SQSPT+HF+IH+RKALLNGISPA NRK+PPLKY
Sbjct: 192 DDHDSYN----------ELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKY 241

Query: 110 EYYFGLLRDFPELQFTLNGGITCIDEVNAARRQGAH 3
           EYYFGLLRDFP+L+FT+NGGI C+DEVNAA RQGAH
Sbjct: 242 EYYFGLLRDFPDLRFTINGGINCVDEVNAALRQGAH 277


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  141 bits (356), Expect = 2e-31
 Identities = 66/96 (68%), Positives = 79/96 (82%)
 Frame = -1

Query: 290 DDYRSFNYG*TSV*LEQKTGDFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLKY 111
           DD+ S+N          +  DF+Y V+SQSPT+HF+IH+RKALLNGISPA NRK+PPLKY
Sbjct: 202 DDHDSYN----------ELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKY 251

Query: 110 EYYFGLLRDFPELQFTLNGGITCIDEVNAARRQGAH 3
           EYYFGLLRDFP+L+FT+NGGI C+DEVNAA RQGAH
Sbjct: 252 EYYFGLLRDFPDLRFTINGGINCVDEVNAALRQGAH 287


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  135 bits (339), Expect = 2e-29
 Identities = 60/76 (78%), Positives = 69/76 (90%)
 Frame = -1

Query: 230 DFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLKYEYYFGLLRDFPELQFTLNGG 51
           DF+Y V+S SPTKHF+IH+RKALLNGISPA NRK+PPLKYEYYF LLRDFP+L+FT+NGG
Sbjct: 156 DFIYKVSSLSPTKHFIIHSRKALLNGISPAENRKIPPLKYEYYFALLRDFPDLRFTINGG 215

Query: 50  ITCIDEVNAARRQGAH 3
           I CIDEVN A R+GAH
Sbjct: 216 INCIDEVNLALREGAH 231


>ref|XP_002298425.1| predicted protein [Populus trichocarpa] gi|222845683|gb|EEE83230.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  134 bits (337), Expect = 4e-29
 Identities = 62/96 (64%), Positives = 77/96 (80%)
 Frame = -1

Query: 290 DDYRSFNYG*TSV*LEQKTGDFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLKY 111
           DD+ S+N          +  DF+Y V+S SPTKHF+IH+RKALLNGISPA NR++PPLKY
Sbjct: 146 DDHDSYN----------ELCDFIYKVSSLSPTKHFIIHSRKALLNGISPADNRRIPPLKY 195

Query: 110 EYYFGLLRDFPELQFTLNGGITCIDEVNAARRQGAH 3
           EYY+ LLRDFP+L+FT+NGGI C+DEVNAA R+GAH
Sbjct: 196 EYYYALLRDFPDLRFTINGGINCVDEVNAALREGAH 231