BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016274
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    65   4e-09
emb|CBI24913.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    65   4e-09
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...    64   1e-08
ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/42 (71%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = -3

Query: 416 DFVYTVASQSPTKHFVIHAQKALLNGISPA-NRKVHPLKKNY 294
           DF+Y V+SQSPT+HF+IH++KALLNGISPA NRK+ PLK  Y
Sbjct: 156 DFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKYEY 197


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/42 (71%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = -3

Query: 416 DFVYTVASQSPTKHFVIHAQKALLNGISPA-NRKVHPLKKNY 294
           DF+Y V+SQSPT+HF+IH++KALLNGISPA NRK+ PLK  Y
Sbjct: 202 DFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKYEY 243


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/42 (71%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = -3

Query: 416 DFVYTVASQSPTKHFVIHAQKALLNGISPA-NRKVHPLKKNY 294
           DF+Y V+SQSPT+HF+IH++KALLNGISPA NRK+ PLK  Y
Sbjct: 212 DFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKYEY 253


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
 Frame = -3

Query: 416 DFVYTVASQSPTKHFVIHAQKALLNGISPA-NRKVHPLKKNY 294
           DF+Y V+S SPTKHF+IH++KALLNGISPA NRK+ PLK  Y
Sbjct: 156 DFIYKVSSLSPTKHFIIHSRKALLNGISPAENRKIPPLKYEY 197


>ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|222850448|gb|EEE87995.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
 Frame = -3

Query: 416 DFVYTVASQSPTKHFVIHAQKALLNGISPA-NRKVHPLKKNY 294
           DF+Y V+S SPTKHF+IH++KALLNGISPA NR++ PLK  Y
Sbjct: 156 DFIYKVSSLSPTKHFIIHSRKALLNGISPADNRRIPPLKYEY 197