BLASTX nr result

ID: Coptis25_contig00016273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016273
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278603.2| PREDICTED: kinesin-4-like [Vitis vinifera]         62   5e-08
dbj|BAJ53207.1| JHL06B08.9 [Jatropha curcas]                           61   8e-08
ref|XP_002533437.1| kinesin heavy chain, putative [Ricinus commu...    59   3e-07

>ref|XP_002278603.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 977

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +2

Query: 29  SCLGKGNCNHWHILKVQEKXXXXXXXXXXXXXXEFKVLQSQLHDDLQVLGDKVQEMSVAA 208
           +CL K +CNH  I ++QEK              EFK L+SQL +DL+ LG+ VQEMS AA
Sbjct: 283 ACLKKNSCNHLLIFQMQEKELSDLKALLSRTKREFKGLESQLQNDLKQLGNVVQEMSAAA 342

Query: 209 LGYQR 223
           +GYQR
Sbjct: 343 VGYQR 347


>dbj|BAJ53207.1| JHL06B08.9 [Jatropha curcas]
          Length = 979

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +2

Query: 29  SCLGKGNCNHWHILKVQEKXXXXXXXXXXXXXXEFKVLQSQLHDDLQVLGDKVQEMSVAA 208
           +CL KGNC H H+ ++ EK              EF+ LQS L  DL+ LG +VQEMS AA
Sbjct: 297 ACLRKGNCKHKHLFQIHEKELMDLKALLTKTKNEFEDLQSHLQTDLRDLGCQVQEMSTAA 356

Query: 209 LGYQR 223
           LGY R
Sbjct: 357 LGYHR 361


>ref|XP_002533437.1| kinesin heavy chain, putative [Ricinus communis]
           gi|223526711|gb|EEF28944.1| kinesin heavy chain,
           putative [Ricinus communis]
          Length = 987

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/65 (46%), Positives = 38/65 (58%)
 Frame = +2

Query: 29  SCLGKGNCNHWHILKVQEKXXXXXXXXXXXXXXEFKVLQSQLHDDLQVLGDKVQEMSVAA 208
           +CL  GNC H H++++QEK              EF+ LQS    DL+ LG +VQEMS AA
Sbjct: 270 ACLRNGNCKHRHLIQMQEKELMNLKALLTETKNEFEDLQSHFQRDLRNLGYQVQEMSAAA 329

Query: 209 LGYQR 223
           LGY R
Sbjct: 330 LGYHR 334


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