BLASTX nr result
ID: Coptis25_contig00016272
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016272 (610 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39646.3| unnamed protein product [Vitis vinifera] 124 1e-26 gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] 119 4e-25 ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin... 118 9e-25 ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S... 118 9e-25 gb|ADE76311.1| unknown [Picea sitchensis] 117 2e-24 >emb|CBI39646.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 124 bits (312), Expect = 1e-26 Identities = 61/91 (67%), Positives = 65/91 (71%), Gaps = 11/91 (12%) Frame = -3 Query: 584 MPLPKYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSF------QIYESDRRVCNH 423 MPL KY+CDYC+KQFQDT SARKRHLQG+QHQRAKA WYDSF Q + VCN Sbjct: 1 MPLGKYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDSFRDPNQIQAEGYGKGVCNR 60 Query: 422 FVRTGSCQYGDSCKYFHP-----NLNTHIRP 345 FVRTG CQYGDSCKYFHP N NT P Sbjct: 61 FVRTGFCQYGDSCKYFHPKQSLQNTNTQSIP 91 >gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] Length = 166 Score = 119 bits (298), Expect = 4e-25 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 14/89 (15%) Frame = -3 Query: 584 MPLPKYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYESD------------ 441 MPL KYYCDYC+KQFQDT +ARKRHLQG+QHQRA+A WYDS + + Sbjct: 1 MPLGKYYCDYCDKQFQDTPAARKRHLQGVQHQRARALWYDSIRHQDQHGGASSLLLPDGT 60 Query: 440 --RRVCNHFVRTGSCQYGDSCKYFHPNLN 360 + +C+HFVRTG+C+YGDSC+YFHP N Sbjct: 61 LAKGICHHFVRTGACKYGDSCRYFHPKPN 89 >ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis sativus] gi|449508616|ref|XP_004163363.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis sativus] Length = 156 Score = 118 bits (295), Expect = 9e-25 Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 8/83 (9%) Frame = -3 Query: 584 MPLPKYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYESD--------RRVC 429 MPL KYYCDYC+KQFQDT ARKRHLQ + HQ+AKA W+DSF+ + R+C Sbjct: 1 MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRIC 60 Query: 428 NHFVRTGSCQYGDSCKYFHPNLN 360 N F+ TG CQYGDSCKYFHPN N Sbjct: 61 NRFLSTGFCQYGDSCKYFHPNNN 83 >ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor] gi|241927354|gb|EES00499.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor] Length = 164 Score = 118 bits (295), Expect = 9e-25 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 14/86 (16%) Frame = -3 Query: 584 MPLPKYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQIYESD------------ 441 MPL KYYCDYC+KQFQDT +AR+RHLQG+QHQRA+A WYDS + E Sbjct: 1 MPLGKYYCDYCDKQFQDTPAARRRHLQGVQHQRARALWYDSIRHQEQHGGVSSLLLPDGT 60 Query: 440 --RRVCNHFVRTGSCQYGDSCKYFHP 369 + +C+HFVRTG+C+YGDSC+YFHP Sbjct: 61 LAKGICHHFVRTGTCKYGDSCRYFHP 86 >gb|ADE76311.1| unknown [Picea sitchensis] Length = 126 Score = 117 bits (292), Expect = 2e-24 Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 8/85 (9%) Frame = -3 Query: 584 MPLPKYYCDYCEKQFQDTASARKRHLQGIQHQRAKAQWYDSFQ------IYESDRRVCNH 423 MPL KYYCDYC+KQFQDT SARKRHLQG+QHQRA+ W+DSF+ + + +C Sbjct: 1 MPLEKYYCDYCDKQFQDTPSARKRHLQGVQHQRARKLWFDSFKDPQQLHAENAGKAICTR 60 Query: 422 FVRTGSCQYGDSCKYFHP--NLNTH 354 FV+TG CQ+GD+CKYFHP N+ H Sbjct: 61 FVKTGFCQFGDNCKYFHPVQNIEQH 85