BLASTX nr result

ID: Coptis25_contig00016269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016269
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284741.1| PREDICTED: proteasome assembly chaperone 2 [...   357   2e-96
emb|CAN60895.1| hypothetical protein VITISV_023239 [Vitis vinifera]   355   6e-96
ref|XP_002519122.1| conserved hypothetical protein [Ricinus comm...   343   2e-92
ref|XP_003537911.1| PREDICTED: proteasome assembly chaperone 2-l...   332   5e-89
ref|XP_003541105.1| PREDICTED: proteasome assembly chaperone 2-l...   330   3e-88

>ref|XP_002284741.1| PREDICTED: proteasome assembly chaperone 2 [Vitis vinifera]
           gi|297741394|emb|CBI32525.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score =  357 bits (917), Expect = 2e-96
 Identities = 189/294 (64%), Positives = 217/294 (73%), Gaps = 4/294 (1%)
 Frame = +3

Query: 9   MEFVLENNDSTPNDNRCSTLILPALSIGNVGQLAIDLLVSSMKAQRIGYLDDPNVLPCVG 188
           MEF++E      ND  CSTL+LPALSIGNVGQLA+DLL+SS +A+RIGYLDDP VLPCVG
Sbjct: 1   MEFIVEEGKHLNND--CSTLVLPALSIGNVGQLAVDLLISSTRAERIGYLDDPYVLPCVG 58

Query: 189 NDAYGP--GGVLALPLEAYESVFNDLTLVQQRSPVVKGMMIEFAKNLASFAATSGKKHII 362
           NDAYGP   G +ALPLEAY+S  N LTLVQQRSPV+KGMM+EFAKNLA FAA SGKKH+I
Sbjct: 59  NDAYGPIPRGEVALPLEAYDSSLNKLTLVQQRSPVLKGMMVEFAKNLAYFAADSGKKHVI 118

Query: 363 VLSSLDSGRRKKIDVSSDTQIYYLSNSKPDGKDDHCESLGWKVLQEYDLEQRRWKYLSSL 542
           VLSSLD G+ ++ID+SS +QIYY+S++  DG DD CE LGWK L EY+  QRRWKYLS+L
Sbjct: 119 VLSSLDFGQWQRIDMSSGSQIYYISSANMDGADDDCEKLGWKKLHEYNPAQRRWKYLSTL 178

Query: 543 AAGESV-EDGSLFEDELLD-EDYIPSLPFAALFSCCKXXXXXXXXXXXXXXXXXXXXXXA 716
           AAG ++ EDG  FEDEL D EDY PSLPFAAL SC K                      A
Sbjct: 179 AAGNAMQEDGLAFEDELEDEEDYYPSLPFAALLSCFK----------------------A 216

Query: 717 KGLKVTCILCYCSEGDNIPDSFQLADATCRVLGLSINKLCGTDESGWIIPQSWK 878
           KGLKVTC+LCYCSEGDNIPD+F LADA C++L LS     G     W IP SWK
Sbjct: 217 KGLKVTCLLCYCSEGDNIPDAFNLADAACKLLELSPQNFHGDQGGNWAIPFSWK 270


>emb|CAN60895.1| hypothetical protein VITISV_023239 [Vitis vinifera]
          Length = 282

 Score =  355 bits (912), Expect = 6e-96
 Identities = 188/294 (63%), Positives = 216/294 (73%), Gaps = 4/294 (1%)
 Frame = +3

Query: 9   MEFVLENNDSTPNDNRCSTLILPALSIGNVGQLAIDLLVSSMKAQRIGYLDDPNVLPCVG 188
           MEF++E      ND  CSTL+LPALSIGNVGQLA+DLL+SS + +RIGYLDDP VLPCVG
Sbjct: 1   MEFIVEEGKHLNND--CSTLVLPALSIGNVGQLAVDLLISSTRTERIGYLDDPYVLPCVG 58

Query: 189 NDAYGP--GGVLALPLEAYESVFNDLTLVQQRSPVVKGMMIEFAKNLASFAATSGKKHII 362
           NDAYGP   G +ALPLEAY+S  N LTLVQQRSPV+KGMM+EFAKNLA FAA SGKKH+I
Sbjct: 59  NDAYGPIPRGEVALPLEAYDSSLNKLTLVQQRSPVLKGMMVEFAKNLADFAADSGKKHVI 118

Query: 363 VLSSLDSGRRKKIDVSSDTQIYYLSNSKPDGKDDHCESLGWKVLQEYDLEQRRWKYLSSL 542
           VLSSLD G+ ++ID+SS +QIYY+S++  DG DD CE LGWK L EY+  QRRWKYLS+L
Sbjct: 119 VLSSLDFGQWQRIDMSSGSQIYYISSANMDGTDDDCEKLGWKKLHEYNPAQRRWKYLSTL 178

Query: 543 AAGESV-EDGSLFEDELLD-EDYIPSLPFAALFSCCKXXXXXXXXXXXXXXXXXXXXXXA 716
           AAG ++ EDG   EDEL D EDY PSLPFAALFSC K                      A
Sbjct: 179 AAGNAMQEDGLPXEDELEDEEDYYPSLPFAALFSCFK----------------------A 216

Query: 717 KGLKVTCILCYCSEGDNIPDSFQLADATCRVLGLSINKLCGTDESGWIIPQSWK 878
           KGLKVTC+LCYCSEGDNIPD+F LADA C++L LS     G     W IP SWK
Sbjct: 217 KGLKVTCLLCYCSEGDNIPDAFNLADAACKLLELSPQNFHGDQGGNWAIPFSWK 270


>ref|XP_002519122.1| conserved hypothetical protein [Ricinus communis]
           gi|223541785|gb|EEF43333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 281

 Score =  343 bits (881), Expect = 2e-92
 Identities = 181/293 (61%), Positives = 209/293 (71%), Gaps = 3/293 (1%)
 Frame = +3

Query: 9   MEFVLENNDSTPNDNRCSTLILPALSIGNVGQLAIDLLVSSMKAQRIGYLDDPNVLPCVG 188
           MEF++E       +  CSTL+LPALSIGNVGQLA+DLLVSS KA+RIGYLDDPNVLPCVG
Sbjct: 1   MEFIVEEGKQLHKE--CSTLVLPALSIGNVGQLAVDLLVSSQKAERIGYLDDPNVLPCVG 58

Query: 189 NDAYGP--GGVLALPLEAYESVFNDLTLVQQRSPVVKGMMIEFAKNLASFAATSGKKHII 362
           NDAYGP   G LAL LEAY+S  N LTLVQQRSPVVKG M+EFA NLA FAA SGKKH I
Sbjct: 59  NDAYGPIPCGNLALSLEAYDSPANALTLVQQRSPVVKGKMVEFANNLAEFAAASGKKHAI 118

Query: 363 VLSSLDSGRRKKIDVSSDTQIYYLSNSKPDGKDDHCESLGWKVLQEYDLEQRRWKYLSSL 542
           +LS LD GR ++ID+SS  Q YYLS++  DG DD CE LGWK LQEY+  QR WKYLS+L
Sbjct: 119 LLSGLDFGRWQRIDMSSGLQTYYLSSTNSDGTDDDCERLGWKRLQEYNPAQRSWKYLSTL 178

Query: 543 AAGESV-EDGSLFEDELLDEDYIPSLPFAALFSCCKXXXXXXXXXXXXXXXXXXXXXXAK 719
           A G  + ED   +EDEL +EDY PSLPFAAL+SC K                      AK
Sbjct: 179 AEGNPMPEDRLPYEDELEEEDYYPSLPFAALYSCFK----------------------AK 216

Query: 720 GLKVTCILCYCSEGDNIPDSFQLADATCRVLGLSINKLCGTDESGWIIPQSWK 878
           GLKVTC+ CYCSEGDNI D+F LA+A C++LG+S     G +   W+IP SWK
Sbjct: 217 GLKVTCLFCYCSEGDNISDAFHLAEAACKILGISAGHFHGEENVKWLIPYSWK 269


>ref|XP_003537911.1| PREDICTED: proteasome assembly chaperone 2-like [Glycine max]
          Length = 280

 Score =  332 bits (852), Expect = 5e-89
 Identities = 180/292 (61%), Positives = 208/292 (71%), Gaps = 3/292 (1%)
 Frame = +3

Query: 9   MEFVLENNDSTPNDNRCSTLILPALSIGNVGQLAIDLLVSSMKAQRIGYLDDPNVLPCVG 188
           MEFV E       D  CSTLILPALSIGNVGQL  DLL+SSM ++R+GYLDDPNVLPCVG
Sbjct: 1   MEFVPEEGKHLHED--CSTLILPALSIGNVGQLVADLLISSMGSERVGYLDDPNVLPCVG 58

Query: 189 NDAYGP--GGVLALPLEAYESVFNDLTLVQQRSPVVKGMMIEFAKNLASFAATSGKKHII 362
           NDAYGP   G LALPLEAY+S  N LT++QQRSPVVKGMMIEFAKN+A F A SGKKHI+
Sbjct: 59  NDAYGPFPQGDLALPLEAYDSPSNALTIIQQRSPVVKGMMIEFAKNMADFLAGSGKKHIV 118

Query: 363 VLSSLDSGRRKKIDVSSDTQIYYLSNSKPDGKDDHCESLGWKVLQEYDLEQRRWKYLSSL 542
           VLSSLD G+ +K+D+SS  QIYYLS+S  +G D++CE LGWK LQEYD  Q  WKYLS L
Sbjct: 119 VLSSLDFGKWQKVDMSSGLQIYYLSSSNSNGTDENCEQLGWKKLQEYDPSQMHWKYLSDL 178

Query: 543 AAGE-SVEDGSLFEDELLDEDYIPSLPFAALFSCCKXXXXXXXXXXXXXXXXXXXXXXAK 719
           A G  +VED +  EDEL +E+Y  SLPFAALFS  K                      AK
Sbjct: 179 AEGNVTVEDITSVEDELEEENYYASLPFAALFSFLK----------------------AK 216

Query: 720 GLKVTCILCYCSEGDNIPDSFQLADATCRVLGLSINKLCGTDESGWIIPQSW 875
           GLKVTC+LCYCSEGDNI D+FQL DA C++L LS +   G +   W +P SW
Sbjct: 217 GLKVTCLLCYCSEGDNISDAFQLGDAVCKLLQLS-HPTTGIEGGKWRVPLSW 267


>ref|XP_003541105.1| PREDICTED: proteasome assembly chaperone 2-like isoform 1 [Glycine
           max]
          Length = 280

 Score =  330 bits (845), Expect = 3e-88
 Identities = 176/292 (60%), Positives = 211/292 (72%), Gaps = 3/292 (1%)
 Frame = +3

Query: 9   MEFVLENNDSTPNDNRCSTLILPALSIGNVGQLAIDLLVSSMKAQRIGYLDDPNVLPCVG 188
           MEFV E       D  CSTLILPALSIGNVGQL  DLL+SSM ++R+GYLDDPNVLPCVG
Sbjct: 1   MEFVPEEGKHLHED--CSTLILPALSIGNVGQLVADLLISSMGSERVGYLDDPNVLPCVG 58

Query: 189 NDAYGP--GGVLALPLEAYESVFNDLTLVQQRSPVVKGMMIEFAKNLASFAATSGKKHII 362
           NDAYGP   G LALPLEAY+S+ N LT++QQRSPVVKGMMIEFAKN+A F A SGKKHII
Sbjct: 59  NDAYGPFPQGDLALPLEAYDSLSNALTIIQQRSPVVKGMMIEFAKNMADFLAGSGKKHII 118

Query: 363 VLSSLDSGRRKKIDVSSDTQIYYLSNSKPDGKDDHCESLGWKVLQEYDLEQRRWKYLSSL 542
           VLSSLD G+ +K+D+SS  QI+YLS++  +G D++CE LGWK LQEYD  Q+ WK+LS L
Sbjct: 119 VLSSLDFGKWQKVDMSSGLQIHYLSSANSNGTDENCEQLGWKKLQEYDPSQKHWKHLSDL 178

Query: 543 AAGE-SVEDGSLFEDELLDEDYIPSLPFAALFSCCKXXXXXXXXXXXXXXXXXXXXXXAK 719
           A G  ++ED +  EDEL +E+Y  SLPFAALFS  K                      AK
Sbjct: 179 AEGNVTLEDITSVEDELEEENYYASLPFAALFSFLK----------------------AK 216

Query: 720 GLKVTCILCYCSEGDNIPDSFQLADATCRVLGLSINKLCGTDESGWIIPQSW 875
           GLKVTC+LCYCSEGDNI D+FQL DA C++L L+ + + G +   W +P SW
Sbjct: 217 GLKVTCLLCYCSEGDNISDAFQLGDAVCKLLQLN-HPITGIESGKWRVPLSW 267


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