BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016268
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform...   122   3e-26
emb|CAN76718.1| hypothetical protein VITISV_010485 [Vitis vinifera]   122   3e-26
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002510134.1| cyclin A, putative [Ricinus communis] gi|223...   119   3e-25

>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  126 bits (317), Expect = 2e-27
 Identities = 72/145 (49%), Positives = 87/145 (60%)
 Frame = -2

Query: 436 QKPNSVRMTRAAKKRAASETSLQQQLPLNKKRVVLGEITNLKNCSTNVGGVCXXXXXXXX 257
           +K N VR+TRAAKKRAA+  S + + PLNKKRVVLGE+ NL N + +V  V         
Sbjct: 6   EKENCVRITRAAKKRAAALASAEDR-PLNKKRVVLGELPNLSNTTVSVNEV-------HK 57

Query: 256 XXXXXXXXXSXXXXXXXXXXXXXXXXVLSDDPQMCVAYASDIYDYLHSMEAEEKRRPKPD 77
                    S                   +DPQMC  YASDIY+YLH ME + KRRP PD
Sbjct: 58  QKAKTKSNTSKRTLTKKEGVFKEDVDGKPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPD 117

Query: 76  YVEKVQKDINSHMRSILVDWLVEVA 2
           Y+EKVQKD++ +MR ILVDWLVEVA
Sbjct: 118 YIEKVQKDVSPNMRGILVDWLVEVA 142


>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
           gi|302142243|emb|CBI19446.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score =  122 bits (307), Expect = 3e-26
 Identities = 72/144 (50%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
 Frame = -2

Query: 427 NSVRMTRAAKKRAASETSLQQ--QLPLNKKRVVLGEITNLKNCSTNVGGVCXXXXXXXXX 254
           NSVR+TRAAKKRAA+  +     QLP NKKRVVLGE+ NL N +     V          
Sbjct: 6   NSVRITRAAKKRAAAAMAASDSLQLPPNKKRVVLGELPNLSNVAATPAAV-------PAS 58

Query: 253 XXXXXXXXSXXXXXXXXXXXXXXXXVLSDDPQMCVAYASDIYDYLHSMEAEEKRRPKPDY 74
                                      SDDPQMC  YA+DIY+YLHSME E KRRP  DY
Sbjct: 59  GAQKQKFRPKKKEKVKAAVVAPDVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRRPLHDY 118

Query: 73  VEKVQKDINSHMRSILVDWLVEVA 2
           +EKVQKD++ +MR ILVDWLVEVA
Sbjct: 119 IEKVQKDVSHNMRGILVDWLVEVA 142


>emb|CAN76718.1| hypothetical protein VITISV_010485 [Vitis vinifera]
          Length = 353

 Score =  122 bits (307), Expect = 3e-26
 Identities = 72/144 (50%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
 Frame = -2

Query: 427 NSVRMTRAAKKRAASETSLQQ--QLPLNKKRVVLGEITNLKNCSTNVGGVCXXXXXXXXX 254
           NSVR+TRAAKKRAA+  +     QLP NKKRVVLGE+ NL N +     V          
Sbjct: 6   NSVRITRAAKKRAAAAMAASDSLQLPPNKKRVVLGELPNLSNVAATPAAV-------PAS 58

Query: 253 XXXXXXXXSXXXXXXXXXXXXXXXXVLSDDPQMCVAYASDIYDYLHSMEAEEKRRPKPDY 74
                                      SDDPQMC  YA+DIY+YLHSME E KRRP  DY
Sbjct: 59  GAQKQKFRXKKKEKVKAAVVAPDVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRRPLHDY 118

Query: 73  VEKVQKDINSHMRSILVDWLVEVA 2
           +EKVQKD++ +MR ILVDWLVEVA
Sbjct: 119 IEKVQKDVSHNMRGILVDWLVEVA 142


>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  120 bits (300), Expect = 2e-25
 Identities = 68/145 (46%), Positives = 82/145 (56%)
 Frame = -2

Query: 436 QKPNSVRMTRAAKKRAASETSLQQQLPLNKKRVVLGEITNLKNCSTNVGGVCXXXXXXXX 257
           ++ N  R+TRAAKKRAA+  S + Q PLNKKRVVLGE+ NL N   +             
Sbjct: 3   EQENCTRVTRAAKKRAAALASTEDQ-PLNKKRVVLGELPNLSNAIVSSN-------EPQK 54

Query: 256 XXXXXXXXXSXXXXXXXXXXXXXXXXVLSDDPQMCVAYASDIYDYLHSMEAEEKRRPKPD 77
                                        +DPQMC  YASDIY+YLH ME + KRRP PD
Sbjct: 55  QKAKAKPKARKGASTKKEGVLKEDVDGNPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPD 114

Query: 76  YVEKVQKDINSHMRSILVDWLVEVA 2
           Y+EKVQKD++ +MR ILVDWLVEVA
Sbjct: 115 YIEKVQKDVSPNMRGILVDWLVEVA 139


>ref|XP_002510134.1| cyclin A, putative [Ricinus communis] gi|223550835|gb|EEF52321.1|
           cyclin A, putative [Ricinus communis]
          Length = 373

 Score =  119 bits (298), Expect = 3e-25
 Identities = 66/147 (44%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
 Frame = -2

Query: 433 KPNSVRMTRAAKKRAASETSLQQQLPLNKKRVVLGEITNLKNCSTNVGGVCXXXXXXXXX 254
           + N VR+TRAA+KRAA+  S  +  PL+KKRVVLGE+ NL N   +V             
Sbjct: 4   RENCVRLTRAARKRAAAALSNVEDQPLSKKRVVLGELHNLSNVVISVNASAVKDVTQKQK 63

Query: 253 XXXXXXXXSXXXXXXXXXXXXXXXXVLS---DDPQMCVAYASDIYDYLHSMEAEEKRRPK 83
                                     +    DDPQMC  YASDIYDYLH +E   KRRP 
Sbjct: 64  FNSKAKQPKAKKALIVKKDEAPKKVEIDAECDDPQMCGPYASDIYDYLHQLEVNPKRRPL 123

Query: 82  PDYVEKVQKDINSHMRSILVDWLVEVA 2
           PDY+E +QKD++ +MR ILVDWLVEVA
Sbjct: 124 PDYIETIQKDVSPNMRGILVDWLVEVA 150