BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016263
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25349.3| unnamed protein product [Vitis vinifera]              167   2e-57
ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-53
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...   167   5e-49
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...   142   8e-42
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...   130   6e-40

>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  167 bits (423), Expect(2) = 2e-57
 Identities = 80/141 (56%), Positives = 101/141 (71%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H YI+RN+F  D +LE+ALI MY  C  PM AW +F KLE++S+IV  NVMIGGF E+GM
Sbjct: 570 HGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGM 629

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           WEKS ELY  AK +NCKL SA+F+      SH + L FG +VHC+V+K  F+ +PYVCTS
Sbjct: 630 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTS 689

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           L+TMY +   + DAK VFD V
Sbjct: 690 LLTMYAKSGSVEDAKKVFDQV 710



 Score = 82.4 bits (202), Expect(2) = 2e-57
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
 Frame = -1

Query: 628 VFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIKPDAYSLCIVLGVC 449
           VF K+S+S     DI +WN ++DGYFK+G FE+G+ QFC M  LGI+PD YSL IVLG+C
Sbjct: 498 VFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGIC 557

Query: 448 ---SEFVAGKR 425
              S ++AG++
Sbjct: 558 NRLSWYMAGRQ 568



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 40/141 (28%), Positives = 73/141 (51%)
 Frame = -2

Query: 423  HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
            H  +++     +  ++SAL+ MY KCG    A  VF  ++++  +V    MI GFC++  
Sbjct: 773  HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERD-VVAWGSMIAGFCQNRR 831

Query: 243  WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
            ++ + +L+   +K+  K  S   ++VI      +N++ G  +H   +K G E + +V  S
Sbjct: 832  FKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACS 891

Query: 63   LVTMYGRFMQIGDAK*VFDGV 1
            LV MY +F     A+ VF  +
Sbjct: 892  LVDMYSKFGFAESAEMVFSSM 912



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
 Frame = -2

Query: 423  HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
            H Y +R     D  +E+ALIDMY+KCGC  YA  +F+ +  + ++V  N MI G+   G 
Sbjct: 975  HAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENM-PRRNLVTWNSMIAGYGSHGN 1033

Query: 243  WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYV--C 70
             E++  L+ + K+        TF  +I   SH+  ++ G+ +   +M+  +  EP +   
Sbjct: 1034 CEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLF-QLMRIEYGVEPRMEHY 1092

Query: 69   TSLVTMYGRFMQIGDA 22
             S+V + GR  ++ DA
Sbjct: 1093 ASVVDLLGRAGRLDDA 1108



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSS----IVVRNVMIGGFC 256
           H  IV      D ++ ++LI+MY+KCG    A +VFDK+ +       I V N +I G+ 
Sbjct: 464 HASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYF 523

Query: 255 EDGMWEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPY 76
           + G +E+    +C+ ++   +    + S V+ + +       G ++H  +++  FE +PY
Sbjct: 524 KYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPY 583

Query: 75  VCTSLVTMY 49
           + T+L+ MY
Sbjct: 584 LETALIGMY 592



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 41/138 (29%), Positives = 69/138 (50%)
 Frame = -2

Query: 423  HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
            H  +++  F  D ++ ++L+ MY K G    A +VFD++ DK  + +RN MI  F  +G 
Sbjct: 672  HCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKE-VELRNAMISAFIGNGR 730

Query: 243  WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
               +  LY + K     + S T S+++   S   +  FG  VH  V+K   +    + ++
Sbjct: 731  AYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSA 790

Query: 63   LVTMYGRFMQIGDAK*VF 10
            L+TMY +     DA  VF
Sbjct: 791  LLTMYYKCGSTEDADSVF 808


>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score =  157 bits (397), Expect(2) = 6e-53
 Identities = 75/141 (53%), Positives = 99/141 (70%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H Y VR VF  D FLES LI MY  CG P+ AWR+F +LEDK ++V  NVMIGGF E+G+
Sbjct: 177 HGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGL 236

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           WE S E+Y  AK +N KL SA+F++ +      + + FGM+VHC+++K GFE +PYVCTS
Sbjct: 237 WENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTS 296

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           L+TMY +   + DA+ VFD V
Sbjct: 297 LLTMYSKCKLVEDAENVFDQV 317



 Score = 77.4 bits (189), Expect(2) = 6e-53
 Identities = 35/58 (60%), Positives = 45/58 (77%)
 Frame = -1

Query: 628 VFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIKPDAYSLCIVLG 455
           VF K+ +SEV  QD+  WNSIV+GYF+FG  ++GI QFC M   G++PDAYSLCI+LG
Sbjct: 107 VFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLG 164



 Score = 63.5 bits (153), Expect(2) = 3e-11
 Identities = 37/128 (28%), Positives = 64/128 (50%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H  +V+     +  L+SAL+ MY KCG    A  +F+ ++ +  +V    MI GFC++  
Sbjct: 380 HAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRD-VVAWGSMISGFCQNRK 438

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           + ++ E Y        K  S   ++V+   +   N+  G  +H   +K G E + +V +S
Sbjct: 439 YMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASS 498

Query: 63  LVTMYGRF 40
           LV MY +F
Sbjct: 499 LVDMYSKF 506



 Score = 31.2 bits (69), Expect(2) = 3e-11
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = -1

Query: 631 NVFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIKPDAYSLCIVLGV 452
           NVF +VS     V+   LWN+++  Y   G   DG+  +  M  L I PD+ +   VL  
Sbjct: 312 NVFDQVS-----VKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSS 366

Query: 451 C 449
           C
Sbjct: 367 C 367



 Score = 63.2 bits (152), Expect(2) = 5e-11
 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H Y++R     D  LE+ALIDMY+KCG   YA  +F  +  ++++V  N+MI G    G 
Sbjct: 582 HGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNML-QTNLVTWNIMIAGCGSHGD 640

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKV-HCNVMKFGFEWEPYVCT 67
           W K+  L+ + +         TF +++   +H   ++ G+K+     ++ G E       
Sbjct: 641 WLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYV 700

Query: 66  SLVTMYGRFMQIGDA 22
           ++V + GR  ++ DA
Sbjct: 701 NIVDLLGRAGRLDDA 715



 Score = 30.8 bits (68), Expect(2) = 5e-11
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = -1

Query: 667 MHALFCYGVTLYNVFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIK 488
           M++ F +     NVF     S++ ++++  WNSI+  Y + G  +  I  F  M   G+ 
Sbjct: 502 MYSKFNFPKMSGNVF-----SDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLF 556

Query: 487 PDAYSLCIVL-GVCSEFVAGKRT*IH 413
           PD+ S+  VL  V S  V  K   +H
Sbjct: 557 PDSVSITSVLVSVSSVAVLRKGKAVH 582


>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  167 bits (423), Expect(2) = 5e-49
 Identities = 80/141 (56%), Positives = 101/141 (71%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H YI+RN+F  D +LE+ALI MY  C  PM AW +F KLE++S+IV  NVMIGGF E+GM
Sbjct: 165 HGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGM 224

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           WEKS ELY  AK +NCKL SA+F+      SH + L FG +VHC+V+K  F+ +PYVCTS
Sbjct: 225 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTS 284

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           L+TMY +   + DAK VFD V
Sbjct: 285 LLTMYAKSGSVEDAKKVFDQV 305



 Score = 54.3 bits (129), Expect(2) = 5e-49
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -1

Query: 628 VFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGL 497
           VF K+S+S     DI +WN ++DGYFK+G FE+G+ QFC M  L
Sbjct: 112 VFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQEL 155



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 40/141 (28%), Positives = 73/141 (51%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H  +++     +  ++SAL+ MY KCG    A  VF  ++++  +V    MI GFC++  
Sbjct: 368 HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERD-VVAWGSMIAGFCQNRR 426

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           ++ + +L+   +K+  K  S   ++VI      +N++ G  +H   +K G E + +V  S
Sbjct: 427 FKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACS 486

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           LV MY +F     A+ VF  +
Sbjct: 487 LVDMYSKFGFAESAEMVFSSM 507



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H Y +R     D  +E+ALIDMY+KCGC  YA  +F+ +  + ++V  N MI G+   G 
Sbjct: 570 HAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENM-PRRNLVTWNSMIAGYGSHGN 628

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYV--C 70
            E++  L+ + K+        TF  +I   SH+  ++ G+ +   +M+  +  EP +   
Sbjct: 629 CEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLF-QLMRIEYGVEPRMEHY 687

Query: 69  TSLVTMYGRFMQIGDA 22
            S+V + GR  ++ DA
Sbjct: 688 ASVVDLLGRAGRLDDA 703



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 41/138 (29%), Positives = 69/138 (50%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H  +++  F  D ++ ++L+ MY K G    A +VFD++ DK  + +RN MI  F  +G 
Sbjct: 267 HCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKE-VELRNAMISAFIGNGR 325

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
              +  LY + K     + S T S+++   S   +  FG  VH  V+K   +    + ++
Sbjct: 326 AYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSA 385

Query: 63  LVTMYGRFMQIGDAK*VF 10
           L+TMY +     DA  VF
Sbjct: 386 LLTMYYKCGSTEDADSVF 403


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score =  142 bits (358), Expect(2) = 8e-42
 Identities = 71/141 (50%), Positives = 96/141 (68%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H YIVRN+  +D FLE+ALID Y KCG P  A  +F KL+D+S+IV  NVMIGGF E+G+
Sbjct: 162 HSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGL 221

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           WE S E Y  AK +N K+ S++F+  +      + + FG +VHC+ +K GFE +PYV TS
Sbjct: 222 WENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTS 281

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           L+TMYG+   I  A+ VF+ V
Sbjct: 282 LLTMYGKCQMIESAEKVFNEV 302



 Score = 55.1 bits (131), Expect(2) = 8e-42
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -1

Query: 628 VFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIK 488
           VF ++ KS V V D+ +WNSI+DGYF+FG  E+G+VQF  M   G K
Sbjct: 110 VFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK 156



 Score = 78.2 bits (191), Expect(2) = 6e-14
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H Y+VR    +D  +E+ LIDMY+KCG   YA  +F+++ +K ++V  N MIGG+   G 
Sbjct: 567 HGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEK-NLVAWNSMIGGYGSHGE 625

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKV-HCNVMKFGFEWEPYVCT 67
             K+ EL+ + +    K    TF +++   +H+  ++ G+ +     MKFG E       
Sbjct: 626 CSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYV 685

Query: 66  SLVTMYGRFMQIGDA 22
           ++V +YGR   +GDA
Sbjct: 686 NIVDLYGRAGCLGDA 700



 Score = 25.8 bits (55), Expect(2) = 6e-14
 Identities = 19/78 (24%), Positives = 36/78 (46%)
 Frame = -1

Query: 667 MHALFCYGVTLYNVFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIK 488
           M++ F +     N+F     S++ ++++  WNSI+  Y +    +  I  F  ++   + 
Sbjct: 487 MYSKFGFPERAGNIF-----SDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY 541

Query: 487 PDAYSLCIVLGVCSEFVA 434
           PD+ S   VL   S   A
Sbjct: 542 PDSVSFTSVLAAISSVAA 559



 Score = 58.5 bits (140), Expect(2) = 3e-08
 Identities = 35/141 (24%), Positives = 73/141 (51%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H +++++    D F+ S+L+DMY K G P  A  +F  +  K ++V  N +I  +C + +
Sbjct: 466 HGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIISCYCRNNL 524

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
            + S  L+ Q  +++    S +F++V+   S    L  G  VH  +++    ++  V  +
Sbjct: 525 PDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENT 584

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           L+ MY +   +  A+ +F+ +
Sbjct: 585 LIDMYIKCGLLKYAQHIFERI 605



 Score = 26.2 bits (56), Expect(2) = 3e-08
 Identities = 10/49 (20%), Positives = 26/49 (53%)
 Frame = -1

Query: 592 QDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIKPDAYSLCIVLGVCS 446
           +D+  W S++ G+ +   +++ +  F  M    +KPD+  +  ++  C+
Sbjct: 406 RDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACT 454



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 33/128 (25%), Positives = 67/128 (52%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H  IV+        ++SAL+ MY K G   YA  +F  ++++  +V    +I GFC++  
Sbjct: 365 HTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERD-VVAWGSVISGFCQNRK 423

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
           ++++ + +   + D  K  S   +++I   +  + +  G  +H  V+K G + + +V +S
Sbjct: 424 YKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASS 483

Query: 63  LVTMYGRF 40
           L+ MY +F
Sbjct: 484 LLDMYSKF 491


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  130 bits (328), Expect(2) = 6e-40
 Identities = 64/141 (45%), Positives = 96/141 (68%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H +++RN    D+FL++ALIDMY K G  + AWRVF ++EDKS++V+ NVMI GF   G+
Sbjct: 193 HGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI 252

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVCTS 64
            E S +LY  AK ++ KL S +F+  +   S ++N  FG ++HC+V+K G   +PYVCTS
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTS 312

Query: 63  LVTMYGRFMQIGDAK*VFDGV 1
           L++MY +   +G+A+ VF  V
Sbjct: 313 LLSMYSKCGMVGEAETVFSCV 333



 Score = 60.5 bits (145), Expect(2) = 6e-40
 Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = -1

Query: 700 YLQFQFLDKWGMHALFCYGVTLYNVFVKVSKSEVCVQDIPLWNSIVDGYFKFGCFEDGIV 521
           Y++  FLD         Y V +++ + + S+S V  +D+ +WNS++DGYFKF  F++G+ 
Sbjct: 105 YVKCGFLD---------YAVQVFDGWSQ-SQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154

Query: 520 QFC*MMGLGIKPDAYSLCIVLGV-CSE 443
            F  M+  G++PDA+SL IV+ V C E
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKE 181



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 36/129 (27%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H  + +      + +ESAL+ +Y KCGC   A+ VF  +E+K  +V    +I G C++G 
Sbjct: 396 HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGK 454

Query: 243 WEKSFELYCQAK--KDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYVC 70
           ++++ +++   K   D+ K  S   ++V    +  + L+FG++VH +++K G     +V 
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514

Query: 69  TSLVTMYGR 43
           +SL+ +Y +
Sbjct: 515 SSLIDLYSK 523



 Score = 58.2 bits (139), Expect(2) = 2e-08
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = -2

Query: 423 HRYIVRNVFMWDAFLESALIDMYMKCGCPMYAWRVFDKLEDKSSIVVRNVMIGGFCEDGM 244
           H Y +R     D  L++ALIDMY+KCG   YA  +F K++ K S++  N+MI G+   G 
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGD 658

Query: 243 WEKSFELYCQAKKDNCKLGSATFSNVIMVSSHADNLKFGMKVHCNVMKFGFEWEPYV--C 70
              +  L+ + KK        TF ++I   +H+  ++ G  +    MK  +  EP +   
Sbjct: 659 CITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF-EFMKQDYGIEPNMEHY 717

Query: 69  TSLVTMYGR 43
            ++V + GR
Sbjct: 718 ANMVDLLGR 726



 Score = 26.9 bits (58), Expect(2) = 2e-08
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 607 SEVCVQDIPLWNSIVDGYFKFGCFEDGIVQFC*MMGLGIKPDAYSLCIVL 458
           + +  +++  WNS++  Y +    E  I  F  M+  GI PD+ S+  VL
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584