BLASTX nr result

ID: Coptis25_contig00016258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016258
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268787.1| PREDICTED: UDP-glucuronic acid decarboxylase...   274   e-134
ref|XP_003536125.1| PREDICTED: UDP-glucuronic acid decarboxylase...   274   e-131
gb|ACJ54441.1| UDP-glucuronic acid decarboxylase 2 [Gossypium hi...   275   e-127
gb|AAT40109.1| putative UDP-glucuronate decarboxylase 3 [Nicotia...   272   e-126
ref|XP_002876692.1| UDP-glucuronic acid decarboxylase 2 [Arabido...   275   e-126

>ref|XP_002268787.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Vitis vinifera]
          Length = 444

 Score =  274 bits (701), Expect(3) = e-134
 Identities = 134/136 (98%), Positives = 134/136 (98%)
 Frame = +2

Query: 773  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 952
            PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN
Sbjct: 192  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 251

Query: 953  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMGIDDGRVVSNFVAQA 1132
            VNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRM IDDGRVVSNFVAQA
Sbjct: 252  VNPIGVRSCYDEGKRTAETLTMDYHRGAEVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA 311

Query: 1133 LRKEPLTVYGDGKQTR 1180
            LRKEPLTVYGDGKQTR
Sbjct: 312  LRKEPLTVYGDGKQTR 327



 Score =  151 bits (382), Expect(3) = e-134
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +1

Query: 478 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLMHHFGNPRFELIRHDVVEPIL 657
           IVVTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRK+N+MHHFGNPRFELIRHDVVEP+L
Sbjct: 121 IVVTGGAGFVGSHLVDRLIRRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 180

Query: 658 LEVDQIFHLACPASPV 705
           LEVDQI+HLACPASPV
Sbjct: 181 LEVDQIYHLACPASPV 196



 Score =  102 bits (253), Expect(3) = e-134
 Identities = 62/119 (52%), Positives = 74/119 (62%), Gaps = 7/119 (5%)
 Frame = +3

Query: 30  SELIFRGHEDETTLPMSDTYSPKRPKPWFLPITRPVHYILREQRLVFVLVGILIATVIFS 209
           SELIFRGHE   T PM+D YSPK PKPW L + RP+ Y+LREQRL+F LVGI IATV+F 
Sbjct: 3   SELIFRGHE---TQPMADGYSPKPPKPW-LSVVRPIRYMLREQRLLFTLVGIAIATVVFL 58

Query: 210 IFPSRQSQQHFNYSPVPYGSYFSDESTSLGGGFAAAHRVVYERRG----GFV---GKVP 365
           + PS  +     + P+   SYF  E+T+       AHRV Y   G    GFV   GKVP
Sbjct: 59  LLPSSPAPYTHRFDPIS-DSYFPSETTT-----QLAHRVAYAGHGGGGFGFVNSGGKVP 111


>ref|XP_003536125.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
          Length = 427

 Score =  274 bits (701), Expect(3) = e-131
 Identities = 133/136 (97%), Positives = 134/136 (98%)
 Frame = +2

Query: 773  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 952
            PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQ ETYWGN
Sbjct: 183  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN 242

Query: 953  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMGIDDGRVVSNFVAQA 1132
            VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM +DDGRVVSNFVAQA
Sbjct: 243  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQA 302

Query: 1133 LRKEPLTVYGDGKQTR 1180
            LRKEPLTVYGDGKQTR
Sbjct: 303  LRKEPLTVYGDGKQTR 318



 Score =  151 bits (381), Expect(3) = e-131
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +1

Query: 478 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLMHHFGNPRFELIRHDVVEPIL 657
           IVVTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRK+N+MHHFGNPRFELIRHDVVEP+L
Sbjct: 112 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 171

Query: 658 LEVDQIFHLACPASPV 705
           LEVDQI+HLACPASPV
Sbjct: 172 LEVDQIYHLACPASPV 187



 Score = 94.4 bits (233), Expect(3) = e-131
 Identities = 61/116 (52%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
 Frame = +3

Query: 30  SELIFRGHEDETTLPMSDTYSPKRPKPWFLPITRPVHYILREQRLVFVLVGILIATVIFS 209
           SELIFRGHE +   P+ D+YSPK  KPWF  +TRP+HY+LREQRLVFVLVG++IAT+ F+
Sbjct: 3   SELIFRGHEAQ---PVDDSYSPKPHKPWFT-VTRPIHYMLREQRLVFVLVGVIIATLFFT 58

Query: 210 IFPSRQSQQHFNYSPVPYG----SYFSDESTSLGGGFAAAHRVVYERRGGFVGKVP 365
           + PS  S      S VPY     SYF  ES       A  HRV        VGKVP
Sbjct: 59  LVPSSSS------SSVPYESLPISYFERESKIP----AYHHRVAAAVHS--VGKVP 102


>gb|ACJ54441.1| UDP-glucuronic acid decarboxylase 2 [Gossypium hirsutum]
          Length = 442

 Score =  275 bits (703), Expect(3) = e-127
 Identities = 134/136 (98%), Positives = 134/136 (98%)
 Frame = +2

Query: 773  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 952
            PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQ ETYWGN
Sbjct: 191  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN 250

Query: 953  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMGIDDGRVVSNFVAQA 1132
            VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM IDDGRVVSNFVAQA
Sbjct: 251  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA 310

Query: 1133 LRKEPLTVYGDGKQTR 1180
            LRKEPLTVYGDGKQTR
Sbjct: 311  LRKEPLTVYGDGKQTR 326



 Score =  149 bits (376), Expect(3) = e-127
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +1

Query: 478 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLMHHFGNPRFELIRHDVVEPIL 657
           IVVTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRK+N+MHHFGNP FELIRHDVVEP+L
Sbjct: 120 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 179

Query: 658 LEVDQIFHLACPASPV 705
           LEVDQI+HLACPASPV
Sbjct: 180 LEVDQIYHLACPASPV 195



 Score = 80.5 bits (197), Expect(3) = e-127
 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
 Frame = +3

Query: 30  SELIFRGHEDETTLPMSDTYSPKRPKPWFLPITRPVHYILREQRLVFVLVGILIATVIFS 209
           SELI+RGHE +     SD+YSPK  KPW   +TR V Y+LREQRL+FVLVGI IAT++F+
Sbjct: 3   SELIYRGHETQLA---SDSYSPKPVKPW-ASVTRVVRYMLREQRLLFVLVGIAIATLVFN 58

Query: 210 IFPS-RQSQQHFNYSPVPYGS---YFSDESTSLGGGFAAAHRVVYERRGGFVGKVP 365
           +FP+ R +     +S  P      YF  E+ +    F+ AHR+ +   G   GK+P
Sbjct: 59  VFPAPRAAHGPHLHSTTPLLDSIPYFPIETQN---KFSYAHRLGF-GSGNPTGKIP 110


>gb|AAT40109.1| putative UDP-glucuronate decarboxylase 3 [Nicotiana tabacum]
          Length = 446

 Score =  272 bits (696), Expect(3) = e-126
 Identities = 133/136 (97%), Positives = 133/136 (97%)
 Frame = +2

Query: 773  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 952
            PASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQ ETYWGN
Sbjct: 199  PASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN 258

Query: 953  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMGIDDGRVVSNFVAQA 1132
            VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM IDDGRVVSNFVAQA
Sbjct: 259  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA 318

Query: 1133 LRKEPLTVYGDGKQTR 1180
            LRKEPLTVYGDGKQTR
Sbjct: 319  LRKEPLTVYGDGKQTR 334



 Score =  149 bits (375), Expect(3) = e-126
 Identities = 69/76 (90%), Positives = 75/76 (98%)
 Frame = +1

Query: 478 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLMHHFGNPRFELIRHDVVEPIL 657
           I+VTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRK+N+MHHFGNPRFELIRHDVVEP+L
Sbjct: 128 ILVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 187

Query: 658 LEVDQIFHLACPASPV 705
           +EVDQI+HLACPASPV
Sbjct: 188 VEVDQIYHLACPASPV 203



 Score = 79.7 bits (195), Expect(3) = e-126
 Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
 Frame = +3

Query: 27  SSELIFRGHEDETTLPMSDTYSPKRPKPWFLPITRPVHYILREQRLVFVLVGILIATVIF 206
           +SEL FRG E   T  + + Y+PK  KPW   + RPVHY+L+E+RLVF+  GI IA++IF
Sbjct: 2   ASELFFRGQE---THHIINAYTPKPRKPW-QNVIRPVHYMLKEKRLVFLFAGIAIASLIF 57

Query: 207 SIFPSRQS---QQHFNY-SPVPYGSYFSDESTSLGGGFAAAHRVVYERRGGF-----VGK 359
           ++ PS ++   Q  ++Y +   Y S+   EST      A AHR++Y+ R G       GK
Sbjct: 58  AMLPSSRAPSGQGSYSYINNAIYDSHLPSESTH-SHSIARAHRIIYQNRAGLGSLHSGGK 116

Query: 360 VP 365
           +P
Sbjct: 117 IP 118


>ref|XP_002876692.1| UDP-glucuronic acid decarboxylase 2 [Arabidopsis lyrata subsp.
            lyrata] gi|297322530|gb|EFH52951.1| UDP-glucuronic acid
            decarboxylase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score =  275 bits (703), Expect(3) = e-126
 Identities = 134/136 (98%), Positives = 134/136 (98%)
 Frame = +2

Query: 773  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 952
            PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN
Sbjct: 192  PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN 251

Query: 953  VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMGIDDGRVVSNFVAQA 1132
            VNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRM IDDGRVVSNFVAQA
Sbjct: 252  VNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA 311

Query: 1133 LRKEPLTVYGDGKQTR 1180
            LRKEPLTVYGDGKQTR
Sbjct: 312  LRKEPLTVYGDGKQTR 327



 Score =  145 bits (365), Expect(3) = e-126
 Identities = 67/76 (88%), Positives = 73/76 (96%)
 Frame = +1

Query: 478 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLMHHFGNPRFELIRHDVVEPIL 657
           +VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N+MHHF NP FELIRHDVVEPIL
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPIL 180

Query: 658 LEVDQIFHLACPASPV 705
           LEVDQI+HLACPASPV
Sbjct: 181 LEVDQIYHLACPASPV 196



 Score = 80.5 bits (197), Expect(3) = e-126
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = +3

Query: 27  SSELIFRGHEDETTLPMSDTYSPKRPKPWFLPITRPVHYILREQRLVFVLVGILIATVIF 206
           ++ELI R HE +   P++D Y PK  KPWF+ +TRP+ Y+LREQRL+FVLVGI IAT++F
Sbjct: 2   ANELINRRHEADQ--PIADAYYPKPIKPWFM-VTRPMRYMLREQRLIFVLVGIAIATLVF 58

Query: 207 SIFPSRQSQQHFNYSPVPYGSYFSDESTSLGGGFAAAHRVVYE---RRGGFVGKVP 365
           +IFP  +S Q   YS  P+  Y      S      A  +   E   R G   GK+P
Sbjct: 59  TIFP--RSTQSSAYSD-PFSGYGIRPDESYVPAIQAQRKPSLEYLNRIGATGGKIP 111


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