BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016253
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001141786.1| uncharacterized protein LOC100273922 [Zea ma...    83   2e-14
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...    82   4e-14
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi...    82   4e-14
ref|XP_002468698.1| hypothetical protein SORBIDRAFT_01g050460 [S...    82   4e-14
ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...    81   1e-13

>ref|NP_001141786.1| uncharacterized protein LOC100273922 [Zea mays]
           gi|194705914|gb|ACF87041.1| unknown [Zea mays]
          Length = 445

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/60 (68%), Positives = 47/60 (78%)
 Frame = +1

Query: 31  KVQFLSKILSVTVRVIQRDAEDKKVAFNPRPYFRLFINWLLDLGRSDTGLESAGLQVLTA 210
           K   LSKILSVTVR IQ+DAE+KK +FNPRPYFRLFINWL DL  +D   +S+  QVLTA
Sbjct: 13  KASILSKILSVTVRSIQKDAEEKKASFNPRPYFRLFINWLYDLTTTDGHHDSSNFQVLTA 72


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = +1

Query: 37   QFLSKILSVTVRVIQRDAEDKKVAFNPRPYFRLFINWLLDLGRSDTGLESAGLQVLTA 210
            + LSKIL+VTVR I +DAE+KKV+FNPRP+FRLFINWLLDLG  +   + A LQ+LTA
Sbjct: 1977 KLLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQILTA 2034


>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520704|gb|AET01158.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2418

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = +1

Query: 37   QFLSKILSVTVRVIQRDAEDKKVAFNPRPYFRLFINWLLDLGRSDTGLESAGLQVLTA 210
            + LSKIL+VTVR I +DAE+KKV+FNPRP+FRLFINWLLDLG  +   + A LQ+LTA
Sbjct: 1977 KLLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQILTA 2034


>ref|XP_002468698.1| hypothetical protein SORBIDRAFT_01g050460 [Sorghum bicolor]
            gi|241922552|gb|EER95696.1| hypothetical protein
            SORBIDRAFT_01g050460 [Sorghum bicolor]
          Length = 2371

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = +1

Query: 31   KVQFLSKILSVTVRVIQRDAEDKKVAFNPRPYFRLFINWLLDLGRSDTGLESAGLQVLTA 210
            K   LSKILSVTVR IQ+DAE+KK +FNPRPYFRLFINWL DL  +D   + +  Q+LTA
Sbjct: 1939 KASILSKILSVTVRTIQKDAEEKKASFNPRPYFRLFINWLYDLTTTDGHHDGSNFQILTA 1998


>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = +1

Query: 43   LSKILSVTVRVIQRDAEDKKVAFNPRPYFRLFINWLLDLGRSDTGLESAGLQVLTA 210
            LSKIL+VTVR IQ+D+E+KK++FNPRPYFRLF+NWLLDL   D  ++   LQ+LTA
Sbjct: 1901 LSKILAVTVRFIQKDSEEKKLSFNPRPYFRLFVNWLLDLVSPDPIIDGTNLQILTA 1956