BLASTX nr result

ID: Coptis25_contig00016252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016252
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ85385.1| unknown [Medicago truncatula] gi|388494270|gb|AFK...    79   3e-13
ref|XP_003629679.1| Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asp...    79   3e-13
gb|AFK35933.1| unknown [Lotus japonicus]                               78   9e-13
ref|XP_004138965.1| PREDICTED: uncharacterized protein LOC101215...    77   2e-12
ref|NP_563718.1| ubiquitin-associated (UBA)/TS-N domain-containi...    76   3e-12

>gb|ACJ85385.1| unknown [Medicago truncatula] gi|388494270|gb|AFK35201.1| unknown
           [Medicago truncatula]
          Length = 408

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/45 (88%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 MAGVSLQCGDCGVLLKSVEEAQ---ELTSHSNFAESTEPVLNLVC 3
           MAGVSLQCGDCG LLKSVEEAQ   ELTSHSNF+ESTEPVLNLVC
Sbjct: 1   MAGVSLQCGDCGTLLKSVEEAQEHAELTSHSNFSESTEPVLNLVC 45


>ref|XP_003629679.1| Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
           [Medicago truncatula] gi|355523701|gb|AET04155.1|
           Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine
           amidase [Medicago truncatula]
          Length = 408

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/45 (88%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 MAGVSLQCGDCGVLLKSVEEAQ---ELTSHSNFAESTEPVLNLVC 3
           MAGVSLQCGDCG LLKSVEEAQ   ELTSHSNF+ESTEPVLNLVC
Sbjct: 1   MAGVSLQCGDCGTLLKSVEEAQEHAELTSHSNFSESTEPVLNLVC 45


>gb|AFK35933.1| unknown [Lotus japonicus]
          Length = 410

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/45 (86%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 MAGVSLQCGDCGVLLKSVEEAQ---ELTSHSNFAESTEPVLNLVC 3
           MAGVSL CGDCGVLL+SVEEAQ   ELTSHSNF+ESTEPVLNLVC
Sbjct: 1   MAGVSLMCGDCGVLLRSVEEAQEHAELTSHSNFSESTEPVLNLVC 45


>ref|XP_004138965.1| PREDICTED: uncharacterized protein LOC101215434 [Cucumis sativus]
           gi|449505284|ref|XP_004162425.1| PREDICTED:
           uncharacterized LOC101215434 [Cucumis sativus]
          Length = 411

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/45 (86%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 MAGVSLQCGDCGVLLKSVEEAQ---ELTSHSNFAESTEPVLNLVC 3
           MAG+SLQCGDCGVLLKSVEEAQ   ELTSHSNF+ESTE VLNLVC
Sbjct: 1   MAGLSLQCGDCGVLLKSVEEAQQHAELTSHSNFSESTEAVLNLVC 45


>ref|NP_563718.1| ubiquitin-associated (UBA)/TS-N domain-containing protein
           [Arabidopsis thaliana]
           gi|7211981|gb|AAF40452.1|AC004809_10 ESTs gb|N65605,
           gb|N38087, gb|T20485, gb|T13726, gb|N38339, gb|F15440
           and gb|N97201 come from this gene [Arabidopsis thaliana]
           gi|17065066|gb|AAL32687.1| Unknown protein [Arabidopsis
           thaliana] gi|21594053|gb|AAM65971.1| unknown
           [Arabidopsis thaliana] gi|23197878|gb|AAN15466.1|
           Unknown protein [Arabidopsis thaliana]
           gi|332189630|gb|AEE27751.1| ubiquitin-associated
           (UBA)/TS-N domain-containing protein [Arabidopsis
           thaliana]
          Length = 413

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/45 (86%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 MAGVSLQCGDCGVLLKSVEEAQ---ELTSHSNFAESTEPVLNLVC 3
           MAGVSL+CGDCG LLKSVEEAQ   ELTSHSNFAESTE VLNLVC
Sbjct: 1   MAGVSLKCGDCGTLLKSVEEAQEHAELTSHSNFAESTEAVLNLVC 45


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