BLASTX nr result

ID: Coptis25_contig00016243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016243
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633975.1| PREDICTED: uncharacterized protein LOC100854...   112   7e-23
emb|CBI40308.3| unnamed protein product [Vitis vinifera]              112   7e-23
ref|XP_002524590.1| metal ion binding protein, putative [Ricinus...   111   1e-22
ref|XP_002268731.1| PREDICTED: uncharacterized protein LOC100255...   108   8e-22
ref|XP_002337014.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_003633975.1| PREDICTED: uncharacterized protein LOC100854219 [Vitis vinifera]
          Length = 177

 Score =  112 bits (279), Expect = 7e-23
 Identities = 62/123 (50%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = +2

Query: 104 MKQKVVIKFAMNGPK-SRTKAMKIAVSIPGVISAELQGSDKNEIVVIGEGIDSTILTMSI 280
           MKQKVVIK + NG K SRTK M+ AV  PGV S    G D ++IVVIG+ +DS  LT  +
Sbjct: 58  MKQKVVIKVSFNGEKKSRTKVMQAAVGAPGVESIAFGGEDNDQIVVIGDSLDSVNLTRLL 117

Query: 281 RKKICCTELVSVTPIPEKNVEKNKPPTSDDKVQPMVWNSYSHGTPDIYWTEVRDHNQDFC 460
           RKK+   EL+SV+ + EK  EK     ++  VQPMVW +Y  G P  Y+T VRD+  + C
Sbjct: 118 RKKVKFAELLSVSSVDEKKEEKK---MTEPGVQPMVWPTYQAGVPQYYYTIVRDNRDETC 174

Query: 461 SIM 469
           SIM
Sbjct: 175 SIM 177


>emb|CBI40308.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  112 bits (279), Expect = 7e-23
 Identities = 62/123 (50%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = +2

Query: 104 MKQKVVIKFAMNGPK-SRTKAMKIAVSIPGVISAELQGSDKNEIVVIGEGIDSTILTMSI 280
           MKQKVVIK + NG K SRTK M+ AV  PGV S    G D ++IVVIG+ +DS  LT  +
Sbjct: 197 MKQKVVIKVSFNGEKKSRTKVMQAAVGAPGVESIAFGGEDNDQIVVIGDSLDSVNLTRLL 256

Query: 281 RKKICCTELVSVTPIPEKNVEKNKPPTSDDKVQPMVWNSYSHGTPDIYWTEVRDHNQDFC 460
           RKK+   EL+SV+ + EK  EK     ++  VQPMVW +Y  G P  Y+T VRD+  + C
Sbjct: 257 RKKVKFAELLSVSSVDEKKEEKK---MTEPGVQPMVWPTYQAGVPQYYYTIVRDNRDETC 313

Query: 461 SIM 469
           SIM
Sbjct: 314 SIM 316



 Score =  103 bits (258), Expect = 2e-20
 Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
 Frame = +2

Query: 104 MKQKVVIKFAMNGPK-SRTKAMKIAVSIPGVISAELQGSDKNEIVVIGEGIDSTILTMSI 280
           MKQKVVIK + +G K SRTK M+ AV +PGV S    G D ++IVVIGE +DS  LT  +
Sbjct: 43  MKQKVVIKVSFSGEKKSRTKVMQAAVGVPGVESIAFGGEDNDQIVVIGESLDSVNLTCLL 102

Query: 281 RKKICCTELVSVTPIPEKNVEKNKPPTSDDKVQPMVWNSYSHGTPDIYWTEVRDHNQDFC 460
           RKK+   EL+SV+ + ++  EK   P     VQPMVW +   G P  Y+T V D+  + C
Sbjct: 103 RKKVRFAELLSVSSVEKEEEEKMTEP----GVQPMVWPTVQAGVPQYYYTVVPDNRSEPC 158

Query: 461 SIM 469
           SIM
Sbjct: 159 SIM 161


>ref|XP_002524590.1| metal ion binding protein, putative [Ricinus communis]
           gi|223536143|gb|EEF37798.1| metal ion binding protein,
           putative [Ricinus communis]
          Length = 125

 Score =  111 bits (277), Expect = 1e-22
 Identities = 64/126 (50%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
 Frame = +2

Query: 104 MKQKVVIKFAMNGPKSRTKAMKIAVSIPGVISAELQGSDKNEIVVIGEGIDSTILTMSIR 283
           MKQKVVI+ +MNG KSR+KA+KIAVS+ GV SA L G DK++I V+G+G+D+  L   +R
Sbjct: 1   MKQKVVIRVSMNGQKSRSKALKIAVSVSGVESASLGGQDKSQIEVVGDGVDAVELATMLR 60

Query: 284 KKICCTELVSVTPIPEKNVEKNKPPTSDDKVQPMVWNSYSHGTPDIYWTEVRDHNQ---- 451
           K +   ELVSV+ + EK  EK +    D KVQ MVW  Y  G P  Y  EV+  NQ    
Sbjct: 61  KNVGHAELVSVSAVGEKKEEKKEEKKDDPKVQHMVWPYYGGGVPS-YGYEVKGCNQYPDP 119

Query: 452 DFCSIM 469
             CSIM
Sbjct: 120 YTCSIM 125


>ref|XP_002268731.1| PREDICTED: uncharacterized protein LOC100255094 [Vitis vinifera]
          Length = 124

 Score =  108 bits (270), Expect = 8e-22
 Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
 Frame = +2

Query: 104 MKQKVVIKFAMNGPKS-RTKAMKIAVSIPGVISAELQGSDKNEIVVIGEGIDSTILTMSI 280
           MKQK+VI+  MNG K  R+KAM+ AV +PGV S  L+G DKN+IVVIG+ +DS  LT  +
Sbjct: 1   MKQKMVIRVPMNGEKKCRSKAMQTAVGVPGVESIALEGEDKNQIVVIGDSVDSVNLTCLL 60

Query: 281 RKKICCTELVSVTPIPEKNVEKNKPPTSDDKVQPMVWNSYSHGTPDIYWTEV---RDHNQ 451
           RKK    EL+SV+ + EK  ++N   T    +QPMVW+ Y  G P  Y++ V     +N 
Sbjct: 61  RKKFGSAELLSVSAVSEKKQKENM--TEPGVLQPMVWSPYQAGVPQYYYSTVVCEDKNNY 118

Query: 452 DFCSIM 469
           D CSIM
Sbjct: 119 DTCSIM 124


>ref|XP_002337014.1| predicted protein [Populus trichocarpa] gi|222837833|gb|EEE76198.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  107 bits (268), Expect = 1e-21
 Identities = 57/122 (46%), Positives = 75/122 (61%)
 Frame = +2

Query: 104 MKQKVVIKFAMNGPKSRTKAMKIAVSIPGVISAELQGSDKNEIVVIGEGIDSTILTMSIR 283
           MKQK+VIK    GPKSR+KA++IAV + GV SA L G DK++I V+G+G+D+  LT  +R
Sbjct: 1   MKQKIVIKVTGKGPKSRSKALQIAVGLSGVESARLGGEDKSQIEVVGDGVDAVQLTNLLR 60

Query: 284 KKICCTELVSVTPIPEKNVEKNKPPTSDDKVQPMVWNSYSHGTPDIYWTEVRDHNQDFCS 463
           KK+   EL SV  + EK  EK + P     VQP+VW  +  G P  Y   +  H    CS
Sbjct: 61  KKVGYAELASVEAVGEKKEEKKEEPA----VQPVVWPVFGGGMPQTYIYPIHPHQDPSCS 116

Query: 464 IM 469
           IM
Sbjct: 117 IM 118


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