BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016241
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   274   2e-71
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              274   2e-71
gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis th...   253   6e-65
ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana] gi|33219642...   253   6e-65
ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...   245   1e-62

>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  274 bits (701), Expect = 2e-71
 Identities = 146/270 (54%), Positives = 191/270 (70%), Gaps = 4/270 (1%)
 Frame = +2

Query: 14   PEPSGSKQPAITKFFSKLARSTSQVSSDG--SVVEEERGNYTSVATEPYKEHLDQFLQVI 187
            PE  GSKQ  IT+FFSK+A + SQ S DG    + +   ++ S A   Y+E ++QF++++
Sbjct: 650  PESGGSKQSTITRFFSKIASNDSQ-SGDGISEQLSDNENSFPSEAITSYEEQVEQFIKIV 708

Query: 188  N-GSISRSDAASILEKAKGHLSVALDIYYSNAGGDPDDKVE-LPNRGRTVQTQSCADDCS 361
            N    SR   +SIL+K KG +++ALDIYYS   G+  +  E L    +++Q + C   CS
Sbjct: 709  NVDESSRYYVSSILKKTKGDINMALDIYYSKPEGNLGENEERLVVSSKSIQPECCIQSCS 768

Query: 362  FGNEKKSCDETRNVSSLSVHGSTTDNASAALVLLPLEKYSPIEHACWQSGQPAPYLHIAR 541
               EKK   E  + + +   G + D  +A LV LPLEKYSPIEHACW+ GQPAPYLH+AR
Sbjct: 769  SELEKK-VSEKESGNIVEAKGLSRDTIAATLVSLPLEKYSPIEHACWKLGQPAPYLHLAR 827

Query: 542  TFDLLEAEKGKKKATSMLRNMFRSLLALSPKDVLPAVYLCTNKIAPYHVKMELNIGGSLV 721
            TFDL+E EKGK KA SML NMFRSLLALSP+DV+PAVYLCTNKIA  H  MELNIGGS+V
Sbjct: 828  TFDLVEGEKGKIKAASMLCNMFRSLLALSPEDVIPAVYLCTNKIAADHENMELNIGGSIV 887

Query: 722  SSALEEACGTNKNKIKEMYNSFGDLGSISE 811
            +SA+EEACGT+++KI+ MYNS GDLG +++
Sbjct: 888  TSAMEEACGTSRSKIRAMYNSLGDLGDVAQ 917


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  274 bits (701), Expect = 2e-71
 Identities = 146/270 (54%), Positives = 191/270 (70%), Gaps = 4/270 (1%)
 Frame = +2

Query: 14   PEPSGSKQPAITKFFSKLARSTSQVSSDG--SVVEEERGNYTSVATEPYKEHLDQFLQVI 187
            PE  GSKQ  IT+FFSK+A + SQ S DG    + +   ++ S A   Y+E ++QF++++
Sbjct: 591  PESGGSKQSTITRFFSKIASNDSQ-SGDGISEQLSDNENSFPSEAITSYEEQVEQFIKIV 649

Query: 188  N-GSISRSDAASILEKAKGHLSVALDIYYSNAGGDPDDKVE-LPNRGRTVQTQSCADDCS 361
            N    SR   +SIL+K KG +++ALDIYYS   G+  +  E L    +++Q + C   CS
Sbjct: 650  NVDESSRYYVSSILKKTKGDINMALDIYYSKPEGNLGENEERLVVSSKSIQPECCIQSCS 709

Query: 362  FGNEKKSCDETRNVSSLSVHGSTTDNASAALVLLPLEKYSPIEHACWQSGQPAPYLHIAR 541
               EKK   E  + + +   G + D  +A LV LPLEKYSPIEHACW+ GQPAPYLH+AR
Sbjct: 710  SELEKK-VSEKESGNIVEAKGLSRDTIAATLVSLPLEKYSPIEHACWKLGQPAPYLHLAR 768

Query: 542  TFDLLEAEKGKKKATSMLRNMFRSLLALSPKDVLPAVYLCTNKIAPYHVKMELNIGGSLV 721
            TFDL+E EKGK KA SML NMFRSLLALSP+DV+PAVYLCTNKIA  H  MELNIGGS+V
Sbjct: 769  TFDLVEGEKGKIKAASMLCNMFRSLLALSPEDVIPAVYLCTNKIAADHENMELNIGGSIV 828

Query: 722  SSALEEACGTNKNKIKEMYNSFGDLGSISE 811
            +SA+EEACGT+++KI+ MYNS GDLG +++
Sbjct: 829  TSAMEEACGTSRSKIRAMYNSLGDLGDVAQ 858


>gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
          Length = 1417

 Score =  253 bits (645), Expect = 6e-65
 Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 5/270 (1%)
 Frame = +2

Query: 17   EPSGSKQPAITKFFSKLARSTSQVSSDGSVVEEERGNYTSV---ATEPYKEHLDQFLQVI 187
            +P G  QP + KFF+K+    S   S GS  EE   +   V   A+E YKE  DQF+ ++
Sbjct: 593  KPVGPGQPTLFKFFNKVLDGGSNSVSVGSETEECNTDKKMVHIDASEAYKEVTDQFIDIV 652

Query: 188  NGSISRSD-AASILEKAKGHLSVALDIYYSNAGGDPDDKV-ELPNRGRTVQTQSCADDCS 361
            NGS S  D AASI+++AKG +S AL+IYYS     P D   E     +T+Q   C++ CS
Sbjct: 653  NGSESLRDYAASIIDEAKGDISRALNIYYSKPREIPGDHAGERGLSSKTIQYPKCSEACS 712

Query: 362  FGNEKKSCDETRNVSSLSVHGSTTDNASAALVLLPLEKYSPIEHACWQSGQPAPYLHIAR 541
               +KK+ + + +  ++ V  S  ++     V LP EKY P EHACW+ GQPAPY+H+ R
Sbjct: 713  SQEDKKASENSGHAVNICVQTSAEESVDKNYVSLPPEKYQPKEHACWREGQPAPYIHLVR 772

Query: 542  TFDLLEAEKGKKKATSMLRNMFRSLLALSPKDVLPAVYLCTNKIAPYHVKMELNIGGSLV 721
            TF  +E+EKGK KA SML NMFRSL ALSP+DVLPAVYLCTNKIA  H  +ELNIGGSL+
Sbjct: 773  TFASVESEKGKIKAMSMLCNMFRSLFALSPEDVLPAVYLCTNKIAADHENIELNIGGSLI 832

Query: 722  SSALEEACGTNKNKIKEMYNSFGDLGSISE 811
            SSALEEACG +++ +++MYNS GDLG +++
Sbjct: 833  SSALEEACGISRSTVRDMYNSLGDLGDVAQ 862


>ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana] gi|332196428|gb|AEE34549.1| DNA
            ligase 6 [Arabidopsis thaliana]
          Length = 1396

 Score =  253 bits (645), Expect = 6e-65
 Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 5/270 (1%)
 Frame = +2

Query: 17   EPSGSKQPAITKFFSKLARSTSQVSSDGSVVEEERGNYTSV---ATEPYKEHLDQFLQVI 187
            +P G  QP + KFF+K+    S   S GS  EE   +   V   A+E YKE  DQF+ ++
Sbjct: 593  KPVGPGQPTLFKFFNKVLDGGSNSVSVGSETEECNTDKKMVHIDASEAYKEVTDQFIDIV 652

Query: 188  NGSISRSD-AASILEKAKGHLSVALDIYYSNAGGDPDDKV-ELPNRGRTVQTQSCADDCS 361
            NGS S  D AASI+++AKG +S AL+IYYS     P D   E     +T+Q   C++ CS
Sbjct: 653  NGSESLRDYAASIIDEAKGDISRALNIYYSKPREIPGDHAGERGLSSKTIQYPKCSEACS 712

Query: 362  FGNEKKSCDETRNVSSLSVHGSTTDNASAALVLLPLEKYSPIEHACWQSGQPAPYLHIAR 541
               +KK+ + + +  ++ V  S  ++     V LP EKY P EHACW+ GQPAPY+H+ R
Sbjct: 713  SQEDKKASENSGHAVNICVQTSAEESVDKNYVSLPPEKYQPKEHACWREGQPAPYIHLVR 772

Query: 542  TFDLLEAEKGKKKATSMLRNMFRSLLALSPKDVLPAVYLCTNKIAPYHVKMELNIGGSLV 721
            TF  +E+EKGK KA SML NMFRSL ALSP+DVLPAVYLCTNKIA  H  +ELNIGGSL+
Sbjct: 773  TFASVESEKGKIKAMSMLCNMFRSLFALSPEDVLPAVYLCTNKIAADHENIELNIGGSLI 832

Query: 722  SSALEEACGTNKNKIKEMYNSFGDLGSISE 811
            SSALEEACG +++ +++MYNS GDLG +++
Sbjct: 833  SSALEEACGISRSTVRDMYNSLGDLGDVAQ 862


>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score =  245 bits (626), Expect = 1e-62
 Identities = 139/272 (51%), Positives = 180/272 (66%), Gaps = 7/272 (2%)
 Frame = +2

Query: 17   EPSGSKQPAITKFFSK-LARSTSQVSSDGSVVEEERGNYTSVAT-----EPYKEHLDQFL 178
            EPSGSKQ  IT+FFSK +        SD S  + ++ +           + YK+ +DQF+
Sbjct: 607  EPSGSKQATITRFFSKVIPEMPGGTQSDNSEPKLDQSSKVEDLLPTDDGQMYKDEIDQFM 666

Query: 179  QVINGSIS-RSDAASILEKAKGHLSVALDIYYSNAGGDPDDKVELPNRGRTVQTQSCADD 355
            Q+ING+ S +  A +I+EK KG ++ ALDIYY N+    + ++       +VQ +S  D 
Sbjct: 667  QIINGTESLKKYAITIIEKTKGDINKALDIYYGNSENLGEKQI-------SVQVESKIDR 719

Query: 356  CSFGNEKKSCDETRNVSSLSVHGSTTDNASAALVLLPLEKYSPIEHACWQSGQPAPYLHI 535
                 +K + +E R V  +       DN  A  + LP EKY+P EHACW+ GQPAPYLHI
Sbjct: 720  PVV--KKHASEELRIVPDIFDQKVLKDNVDATHLSLPPEKYNPKEHACWKDGQPAPYLHI 777

Query: 536  ARTFDLLEAEKGKKKATSMLRNMFRSLLALSPKDVLPAVYLCTNKIAPYHVKMELNIGGS 715
            ARTF+LLE EKG+ KATS+L NMFRSLLALSP DVLPAVYLCTNKIA  H   ELNIGGS
Sbjct: 778  ARTFNLLEGEKGRIKATSLLCNMFRSLLALSPADVLPAVYLCTNKIAADHENKELNIGGS 837

Query: 716  LVSSALEEACGTNKNKIKEMYNSFGDLGSISE 811
            LV++ALEEACGTN+ KI+EM+N FGDLG +++
Sbjct: 838  LVTAALEEACGTNRLKIREMFNKFGDLGDVAQ 869