BLASTX nr result

ID: Coptis25_contig00016236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016236
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43360.1| unknown [Medicago truncatula]                           82   2e-25
gb|ACJ83883.1| unknown [Medicago truncatula] gi|388522709|gb|AFK...    82   2e-25
gb|ADV57638.1| copper binding protein 3 [Gossypium hirsutum]           82   6e-24
gb|ABK26526.1| unknown [Picea sitchensis]                              77   3e-23
ref|XP_002272263.1| PREDICTED: uclacyanin-2 [Vitis vinifera] gi|...    78   7e-23

>gb|AFK43360.1| unknown [Medicago truncatula]
          Length = 199

 Score = 81.6 bits (200), Expect(2) = 2e-25
 Identities = 32/55 (58%), Positives = 43/55 (78%)
 Frame = -3

Query: 759 FNYGSLHSVDEVNKADYDSCTSGNALQSYNGGNTMISLNKIGPVYFLCPTFGHCS 595
           F YGS H VDEV+++DY SCTS NA+++Y GGN+ + L K G +YF+CPT GHC+
Sbjct: 55  FKYGSSHQVDEVDESDYKSCTSSNAIKNYAGGNSKVPLTKAGKIYFICPTLGHCT 109



 Score = 61.6 bits (148), Expect(2) = 2e-25
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -2

Query: 931 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGS 821
           D+ VGD+ GWN G DYT W SGKTF VGD L+F YGS
Sbjct: 23  DFTVGDANGWNLGVDYTKWASGKTFKVGDNLVFKYGS 59


>gb|ACJ83883.1| unknown [Medicago truncatula] gi|388522709|gb|AFK49416.1| unknown
           [Medicago truncatula]
          Length = 199

 Score = 81.6 bits (200), Expect(2) = 2e-25
 Identities = 32/55 (58%), Positives = 43/55 (78%)
 Frame = -3

Query: 759 FNYGSLHSVDEVNKADYDSCTSGNALQSYNGGNTMISLNKIGPVYFLCPTFGHCS 595
           F YGS H VDEV+++DY SCTS NA+++Y GGN+ + L K G +YF+CPT GHC+
Sbjct: 55  FKYGSSHQVDEVDESDYKSCTSSNAIKNYAGGNSKVPLTKAGKIYFICPTLGHCT 109



 Score = 61.6 bits (148), Expect(2) = 2e-25
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -2

Query: 931 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGS 821
           D+ VGD+ GWN G DYT W SGKTF VGD L+F YGS
Sbjct: 23  DFTVGDANGWNLGVDYTKWASGKTFKVGDNLVFKYGS 59


>gb|ADV57638.1| copper binding protein 3 [Gossypium hirsutum]
          Length = 177

 Score = 82.4 bits (202), Expect(2) = 6e-24
 Identities = 32/55 (58%), Positives = 46/55 (83%)
 Frame = -3

Query: 759 FNYGSLHSVDEVNKADYDSCTSGNALQSYNGGNTMISLNKIGPVYFLCPTFGHCS 595
           F YG  HSV+EV+K+DYD+C +GNA++SY+ GNT+I+L+  G +YF+CPT GHC+
Sbjct: 53  FTYGGSHSVEEVSKSDYDNCNTGNAIKSYSDGNTVITLSNPGAMYFICPTIGHCA 107



 Score = 55.5 bits (132), Expect(2) = 6e-24
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = -2

Query: 928 YIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYG 824
           Y VGDS+GW    DY +WV GKTF+VGD LLF YG
Sbjct: 22  YTVGDSSGWTTTGDYQSWVQGKTFTVGDTLLFTYG 56


>gb|ABK26526.1| unknown [Picea sitchensis]
          Length = 187

 Score = 77.0 bits (188), Expect(2) = 3e-23
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = -3

Query: 759 FNYGSLHSVDEVNKADYDSCTSGNALQSYNGGNTMISLNKIGPVYFLCPTFGHCS 595
           F Y +LHSV EV+KADYD+C++ NA++SYNGG+T ++L+  G  YF+C T GHCS
Sbjct: 62  FAYSALHSVMEVSKADYDACSTSNAIKSYNGGSTTVTLDSAGAKYFVCGTAGHCS 116



 Score = 58.5 bits (140), Expect(2) = 3e-23
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 931 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGSL 818
           DY VGD+  WN G DY TW SGKTF+VGD+L+F Y +L
Sbjct: 30  DYTVGDTQQWNLGVDYGTWASGKTFAVGDKLVFAYSAL 67


>ref|XP_002272263.1| PREDICTED: uclacyanin-2 [Vitis vinifera]
           gi|297734624|emb|CBI16675.3| unnamed protein product
           [Vitis vinifera]
          Length = 181

 Score = 78.2 bits (191), Expect(2) = 7e-23
 Identities = 33/55 (60%), Positives = 40/55 (72%)
 Frame = -3

Query: 759 FNYGSLHSVDEVNKADYDSCTSGNALQSYNGGNTMISLNKIGPVYFLCPTFGHCS 595
           F YGS HSVDEV+K+ YDSC + N  +SY GG+  I+L   G +YFLCPT GHCS
Sbjct: 53  FTYGSTHSVDEVSKSSYDSCATSNPTKSYTGGSNTIALTTAGSLYFLCPTTGHCS 107



 Score = 56.2 bits (134), Expect(2) = 7e-23
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = -2

Query: 931 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGS 821
           ++ VG S+GW+ G DY+TW SG+TF+VGD L+F YGS
Sbjct: 21  NHTVGGSSGWDTGVDYSTWASGETFTVGDYLVFTYGS 57


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