BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016233
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]            62   9e-08
gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]           57   4e-06

>gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
          Length = 569

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
 Frame = -1

Query: 220 QAMSRIHVMSQASRHARRLYVGGLPSETSKEAIVELFN--CKVKGSFYSG---VILDVHV 56
           QAM++ H+  QA+RHARR+YVGGLP   +++++   FN      G   +G    +L+V++
Sbjct: 219 QAMTQQHIFPQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYI 278

Query: 55  NQEESYAIVEFFSVEEAS 2
           N ++ +A VE  SVEEAS
Sbjct: 279 NHDKKFAFVEMRSVEEAS 296


>gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 506

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = -1

Query: 190 QASRHARRLYVGGLPSETSKEAIVELFN--CKVKGSFYSG---VILDVHVNQEESYAIVE 26
           QA+RHARR+YVGGLPS  +++++   F+      G   +G    ++DV++N E+ +A VE
Sbjct: 168 QATRHARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPGDAVIDVYINHEKKFAFVE 227

Query: 25  FFSVEEAS 2
             SVEEAS
Sbjct: 228 MRSVEEAS 235