BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016228
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    67   1e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   2e-08
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    61   6e-07
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    59   3e-06
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   9e-06

>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = +1

Query: 685 CRGIGAASTVKIIEDLVRDHDPDIICFSETKASCKRMEGVRKRLKYSGNCIVPAEGRKGG 864
           CRGIG  +TVK + DL +D+ P ++   ET+ S  R+E +R  L +  +  V + GR GG
Sbjct: 8   CRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSGG 67

Query: 865 LTVFWKEDFSVDIMGATTNHI-TDVRIRGRRPQ 960
           L +FW  D  + I   +  HI T +   G+ P+
Sbjct: 68  LGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPR 100


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = +1

Query: 685 CRGIGAASTVKIIEDLVRDHDPDIICFSETKASCKRMEGVRKRLKYSGNCIVPAEG---- 852
           CRG+G+ S +  +  L+   +P I+  SETK     ME V+K+LK+     V  EG    
Sbjct: 9   CRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEGECRK 68

Query: 853 RKGGLTVFWKEDFSVDIMGATTNHI 927
           R+GGL + W+ +  V +M  ++NHI
Sbjct: 69  RRGGLAMLWRSEIKVQVMSMSSNHI 93


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
 Frame = +1

Query: 685 CRGIGAASTVKIIEDLVRDHDPDIICFSETKASCKRMEGVRKRLKYSGNCIVPAEGRKGG 864
           CRG+G  +TV+ +  L++     ++   ET+ S ++M  +R++L + G   V +EG+ GG
Sbjct: 643 CRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEGKSGG 702

Query: 865 LTVFWKEDFSVDIMGATTNHI-TDVRIRGRRPQY 963
           L ++W E  SVD+      +I   VR+    PQ+
Sbjct: 703 LALYWDESVSVDVKDINKRYIDAYVRLSPDEPQW 736


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 31/86 (36%), Positives = 48/86 (55%)
 Frame = +1

Query: 685 CRGIGAASTVKIIEDLVRDHDPDIICFSETKASCKRMEGVRKRLKYSGNCIVPAEGRKGG 864
           CRG+G+A+TV  +  LV+   P ++  SETK   K+   +   L +SG+  V  EG  GG
Sbjct: 13  CRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGSFAVSCEGLSGG 72

Query: 865 LTVFWKEDFSVDIMGATTNHITDVRI 942
           L +FW   ++V + G   +H  DV +
Sbjct: 73  LALFWTTAYTVSLRG-FNSHFIDVLV 97


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = +1

Query: 685 CRGIGAASTVKIIEDLVRDHDPDIICFSETKASCKRMEGVRKRLKYSGNCIVPAEGRKGG 864
           CRG+G   TV+ +      + PDI+  SET  +    E ++ RL ++    V + GR GG
Sbjct: 8   CRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVSSRGRAGG 67

Query: 865 LTVFWKEDFSVDIMGATTNHI 927
           L VFW+E+ S  ++  + +HI
Sbjct: 68  LCVFWREELSFSLVSFSQHHI 88