BLASTX nr result

ID: Coptis25_contig00016225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016225
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   263   7e-68
ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus c...   186   8e-45
ref|XP_004172956.1| PREDICTED: uncharacterized LOC101216488, par...   178   2e-42
ref|XP_004142697.1| PREDICTED: uncharacterized protein LOC101216...   178   2e-42
ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837...   174   3e-41

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  263 bits (672), Expect = 7e-68
 Identities = 165/365 (45%), Positives = 207/365 (56%), Gaps = 2/365 (0%)
 Frame = +1

Query: 1    EINLGAEF-SNTVSCGHGAVDLETVSTKTAKXXXXXXXXXXXXXHKVVRESNNSENILRS 177
            E++ G E  S  +SCG  A   ETVS                    V   S N E ++  
Sbjct: 807  EMSDGTELLSVALSCGRVADIAETVSICNDLTQNLLQVEAKNPEKSVPGLSQNLETMING 866

Query: 178  TCDVGAVLVHKDEEVGDSQHEHAESVSRGYQVMDECSRADFNVASTSWENSRCMGQASSV 357
                       +EEVGDSQ+EH ESV+R Y VMDECSR  F + S S E+ R     +SV
Sbjct: 867  DS--------VNEEVGDSQNEHVESVTREYPVMDECSRMAFTIGSKSLEDPRSWMVTNSV 918

Query: 358  PETWRRLHSCHADLKSLLTSEQRSASQIVKLACGLTDLISVSDLMSGRCQPFMSDFLEPS 537
             ETWR+L  CH DL+     EQR ASQIV+L   +++LIS +D +   C P  SD L+ S
Sbjct: 919  QETWRKLRGCHTDLRRYAILEQRDASQIVELTYKMSNLISEADQLRYNCHPLDSDSLDLS 978

Query: 538  MVPSAEPD-MFCWLDVQVQMTSTIAQHGLCFFAKETAAQRLNSGIRSRVDLASEMIASTT 714
             VP  E    F W D Q+QM STIAQHG CF++K  AA     G    VDLASEM+ASTT
Sbjct: 979  AVPCGEESHAFSWYDEQLQMASTIAQHGFCFYSKYIAAAGSILGSDYMVDLASEMLASTT 1038

Query: 715  NPTVLGNLLTKXXXXXXXXXXXXXXEIRLTGCDISLQREIKERLYNTIQTVVPSKMYLAL 894
            N   LG L                 E+  +  DISL+ E +  L N +Q+VVPSK YL +
Sbjct: 1039 NTMALGKLTRPEMRMNWTSRKGVQMEVPKS--DISLRSETEPCLCNIVQSVVPSKSYLGV 1096

Query: 895  KGVAFHEYISSLGQISKLEASRLTENINKTKLRCRRKRAARHYLSSGPLMLSEEDVSFLA 1074
            KG AFHEY+SSL QIS+ EASRL+ENIN+ K   RR RA+RHYLS+G  MLS +D+S L 
Sbjct: 1097 KGHAFHEYLSSLSQISRSEASRLSENINQNKR--RRGRASRHYLSTGACMLSPDDISLLC 1154

Query: 1075 RHSCF 1089
            + +C+
Sbjct: 1155 QSNCY 1159


>ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus communis]
            gi|223546884|gb|EEF48381.1| hypothetical protein
            RCOM_1032100 [Ricinus communis]
          Length = 1247

 Score =  186 bits (473), Expect = 8e-45
 Identities = 122/312 (39%), Positives = 180/312 (57%), Gaps = 5/312 (1%)
 Frame = +1

Query: 178  TCDVGAVLVHKDEEVGDSQHEHAESVSRGYQVMDECSRADFNVASTSWENSRCMGQASSV 357
            TC+  AV  H  EEV DSQ E  ES++R +Q+MDECS  DF+      E  R   +  +V
Sbjct: 946  TCEFIAVSSH--EEVEDSQIELIESITREHQLMDECSCIDFSRKVKPHEICRSSMEIDAV 1003

Query: 358  PETWRRLHSCHADLKSLLTSEQRSASQIVKLACGLTDLISVSDLMSGRCQPFMSDFLEPS 537
             E+WR+L     DL   + +E +  S+I+++AC +++LIS ++++  +CQ    D L   
Sbjct: 1004 RESWRKLRDRRGDLGHFVAAEHK-CSEIIEIACEMSNLISEAEVLHLKCQSL--DSLGLP 1060

Query: 538  MVPSAEPDMFCWLDVQVQMTSTIAQHGLCFFAKETAAQRLNSGIRSRVDLASEMIASTTN 717
            M+ S E D F W + Q+QMTS I +HG CF AK  AA  ++ G  SRVD  S  +  T +
Sbjct: 1061 MIYSEESDAFSWSNEQLQMTSAILEHGFCFHAKVIAAAGMDMGFDSRVD--SGEMPCTNS 1118

Query: 718  PTVLGNLLTKXXXXXXXXXXXXXXEIRLTGC-----DISLQREIKERLYNTIQTVVPSKM 882
               +G +L +              + R+ G      + +L    K +L + I+++VPS+ 
Sbjct: 1119 KIKVGGVLGQNVKGKQI-------DTRVGGVVSWPENATLPNSEKPQLVDIIRSMVPSRA 1171

Query: 883  YLALKGVAFHEYISSLGQISKLEASRLTENINKTKLRCRRKRAARHYLSSGPLMLSEEDV 1062
            Y+ +KG AF EY SSLG +S+ E+ RL+E +NKTK   RR RAAR+YLS+G LMLS E+V
Sbjct: 1172 YMTIKGNAFCEYRSSLGHMSRAESCRLSEGVNKTKK--RRGRAARNYLSTGSLMLSSEEV 1229

Query: 1063 SFLARHSCFSKI 1098
            S L + + F  I
Sbjct: 1230 SLLGQSNLFGNI 1241


>ref|XP_004172956.1| PREDICTED: uncharacterized LOC101216488, partial [Cucumis sativus]
          Length = 571

 Score =  178 bits (452), Expect = 2e-42
 Identities = 123/306 (40%), Positives = 163/306 (53%), Gaps = 1/306 (0%)
 Frame = +1

Query: 163  NILRSTCDVGAVLVHKDEEVGDSQHEHAESVSRGYQVMDECSRADFNVASTSWENSRCMG 342
            ++L  +C+V  +     E  G S + H E+  RGY VMDECSR DFN  S   E      
Sbjct: 270  DVLEDSCNVFNLSC--PEGKGFSCNGHMENNVRGYPVMDECSRIDFN-KSKFVEKPELEV 326

Query: 343  QASSVPETWRRLHSCHADLKS-LLTSEQRSASQIVKLACGLTDLISVSDLMSGRCQPFMS 519
               SV E W++L     DL    +T E++   QI+ L   ++ LIS SDL+S  CQP   
Sbjct: 327  SGDSVQELWKQLRFGRLDLLGDHVTPEKKETIQIIDLVHRMSHLISDSDLLSS-CQP--Q 383

Query: 520  DFLEPSMVPSAEPDMFCWLDVQVQMTSTIAQHGLCFFAKETAAQRLNSGIRSRVDLASEM 699
            D LE       E D F W   Q+QM STIAQHG    A + A    + G  S VD+ SEM
Sbjct: 384  DILETPTFEFEESDSFSWGGEQLQMASTIAQHGFSLIANDIATTGSHVGCDSSVDIVSEM 443

Query: 700  IASTTNPTVLGNLLTKXXXXXXXXXXXXXXEIRLTGCDISLQREIKERLYNTIQTVVPSK 879
            +ASTTN   LG LL                +  L G    L R++K  L++ IQ V P++
Sbjct: 444  LASTTNTAALGKLL-------RHSSTTKILKPSLPGYCHMLDRDMKSHLFDVIQKVAPNR 496

Query: 880  MYLALKGVAFHEYISSLGQISKLEASRLTENINKTKLRCRRKRAARHYLSSGPLMLSEED 1059
            +YL+LKGV F EY+SSL  IS+ E  R++   +KTK   RR R ARHYLS+G  + S ED
Sbjct: 497  LYLSLKGVQFFEYLSSLRCISRSETLRISRGPDKTKR--RRGRVARHYLSTGSHLFSPED 554

Query: 1060 VSFLAR 1077
            ++ L +
Sbjct: 555  ITLLGQ 560


>ref|XP_004142697.1| PREDICTED: uncharacterized protein LOC101216488 [Cucumis sativus]
          Length = 1209

 Score =  178 bits (452), Expect = 2e-42
 Identities = 123/306 (40%), Positives = 163/306 (53%), Gaps = 1/306 (0%)
 Frame = +1

Query: 163  NILRSTCDVGAVLVHKDEEVGDSQHEHAESVSRGYQVMDECSRADFNVASTSWENSRCMG 342
            ++L  +C+V  +     E  G S + H E+  RGY VMDECSR DFN  S   E      
Sbjct: 908  DVLEDSCNVFNLSC--PEGKGFSCNGHMENNVRGYPVMDECSRIDFN-KSKFVEKPELEV 964

Query: 343  QASSVPETWRRLHSCHADLKS-LLTSEQRSASQIVKLACGLTDLISVSDLMSGRCQPFMS 519
               SV E W++L     DL    +T E++   QI+ L   ++ LIS SDL+S  CQP   
Sbjct: 965  SGDSVQELWKQLRFGRLDLLGDHVTPEKKETIQIIDLVHRMSHLISDSDLLSS-CQP--Q 1021

Query: 520  DFLEPSMVPSAEPDMFCWLDVQVQMTSTIAQHGLCFFAKETAAQRLNSGIRSRVDLASEM 699
            D LE       E D F W   Q+QM STIAQHG    A + A    + G  S VD+ SEM
Sbjct: 1022 DILETPTFEFEESDSFSWGGEQLQMASTIAQHGFSLIANDIATTGSHVGCDSSVDIVSEM 1081

Query: 700  IASTTNPTVLGNLLTKXXXXXXXXXXXXXXEIRLTGCDISLQREIKERLYNTIQTVVPSK 879
            +ASTTN   LG LL                +  L G    L R++K  L++ IQ V P++
Sbjct: 1082 LASTTNTAALGKLL-------RHSSTTKILKPSLPGYCHMLDRDMKSHLFDVIQKVAPNR 1134

Query: 880  MYLALKGVAFHEYISSLGQISKLEASRLTENINKTKLRCRRKRAARHYLSSGPLMLSEED 1059
            +YL+LKGV F EY+SSL  IS+ E  R++   +KTK   RR R ARHYLS+G  + S ED
Sbjct: 1135 LYLSLKGVQFFEYLSSLRCISRSETLRISRGPDKTKR--RRGRVARHYLSTGSHLFSPED 1192

Query: 1060 VSFLAR 1077
            ++ L +
Sbjct: 1193 ITLLGQ 1198


>ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837229 [Brachypodium
            distachyon]
          Length = 1272

 Score =  174 bits (442), Expect = 3e-41
 Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 9/304 (2%)
 Frame = +1

Query: 211  DEEVGDSQHEHAESVSR---------GYQVMDECSRADFNVASTSWENSRCMGQASSVPE 363
            ++ VG++   +AES  R         GYQ+MDECS+A+     +  + + C      V +
Sbjct: 969  EDVVGETCEAYAESFGRNEQTSCSTAGYQLMDECSQAESIWLLSGKKTNDCCN-VECVQD 1027

Query: 364  TWRRLHSCHADLKSLLTSEQRSASQIVKLACGLTDLISVSDLMSGRCQPFMSDFLEPSMV 543
            TW RL  C   L    T+  R+ S  +KLA  ++DLIS SDLM   C P  +D L+PS  
Sbjct: 1028 TWNRLRRCCPVLPRE-TNHNRAVSGALKLASSVSDLISESDLMLTGCYPLTNDLLDPSST 1086

Query: 544  PSAEPDMFCWLDVQVQMTSTIAQHGLCFFAKETAAQRLNSGIRSRVDLASEMIASTTNPT 723
            P AEPD F W D Q++M S   QH LC F+++  +Q  + G    +DL+ E++ + T  T
Sbjct: 1087 PCAEPDGFSWYDKQLEMGSVYTQHALCVFSRD--SQDTDDGF---IDLSQELLLAGTTAT 1141

Query: 724  VLGNLLTKXXXXXXXXXXXXXXEIRLTGCDISLQREIKERLYNTIQTVVPSKMYLALKGV 903
             LG L++               +   T C IS  R+    L   +  VVPSK+  +L+G 
Sbjct: 1142 SLGKLVSSGISTSDGYGNISHMK-NPTSC-ISKGRDQLVHLSEVLLPVVPSKLSQSLRGP 1199

Query: 904  AFHEYISSLGQISKLEASRLTENINKTKLRCRRKRAARHYLSSGPLMLSEEDVSFLARHS 1083
            AF +Y+SS+ QIS+LE  RL+E  N+T  + RR R +RHYLSSG L LS EDV  LA+  
Sbjct: 1200 AFVDYLSSMCQISQLENLRLSE--NQTVNKQRRCRQSRHYLSSGALSLSPEDVELLAQSG 1257

Query: 1084 CFSK 1095
            CF +
Sbjct: 1258 CFGE 1261


Top