BLASTX nr result

ID: Coptis25_contig00016224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016224
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]   377   e-102
ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein...   377   e-102
ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein...   377   e-102
ref|XP_002520669.1| protein binding protein, putative [Ricinus c...   377   e-102
ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101

>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
          Length = 1388

 Score =  377 bits (969), Expect = e-102
 Identities = 202/281 (71%), Positives = 219/281 (77%)
 Frame = +3

Query: 18   MISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQRVTVEVIVSLLPTQSRKSTVPM 197
            +IS+ILINYA NSLQGL VRDPQLVK + LD+E QKKQRV VE IVSLLPTQSRKS+VPM
Sbjct: 915  LISKILINYAHNSLQGLAVRDPQLVKGSFLDLELQKKQRVIVEAIVSLLPTQSRKSSVPM 974

Query: 198  AFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILEDILIPTNSQSKNHQPLYETDTIV 377
            AFLSSLLKTAIS+SAS  CRSDLERR+GLQLDQAILEDILIP NS   NH P+Y+TD+I+
Sbjct: 975  AFLSSLLKTAISASASTACRSDLERRIGLQLDQAILEDILIPANSHGNNHGPIYDTDSIL 1034

Query: 378  KTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQSSILKVSKLLDNYLAEIALDSNL 557
            + FSIF                    YDFDSPGSPKQSSI+KVSKLLDNYLAE+ALDSNL
Sbjct: 1035 RIFSIFLNLDEDDDEDNHLRDESEMVYDFDSPGSPKQSSIJKVSKLLDNYLAEVALDSNL 1094

Query: 558  IPSKFIALAELLPDHARIISDGLYRAVDIFLKVXXXXXXXXXXXXXXXXXXXXXXXVHPN 737
             PSKFIAL+ELLPDHARI++DGLYRA DIFLK                        VHPN
Sbjct: 1095 TPSKFIALSELLPDHARIVNDGLYRAADIFLK------------------------VHPN 1130

Query: 738  IKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 860
            IKDSERYRLCKTID QKLSQEACSHAAQNERLPVQMAVQVL
Sbjct: 1131 IKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQVL 1171


>ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform 2
            [Vitis vinifera]
          Length = 655

 Score =  377 bits (968), Expect = e-102
 Identities = 202/281 (71%), Positives = 219/281 (77%)
 Frame = +3

Query: 18   MISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQRVTVEVIVSLLPTQSRKSTVPM 197
            +IS+ILINYA NSLQGL VRDPQLVK + LD+E QKKQRV VE IVSLLPTQSRKS+VPM
Sbjct: 265  LISKILINYAHNSLQGLAVRDPQLVKGSFLDLELQKKQRVIVEAIVSLLPTQSRKSSVPM 324

Query: 198  AFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILEDILIPTNSQSKNHQPLYETDTIV 377
            AFLSSLLKTAIS+SAS  CRSDLERR+GLQLDQAILEDILIP NS   NH P+Y+TD+I+
Sbjct: 325  AFLSSLLKTAISASASTACRSDLERRIGLQLDQAILEDILIPANSHGNNHGPIYDTDSIL 384

Query: 378  KTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQSSILKVSKLLDNYLAEIALDSNL 557
            + FSIF                    YDFDSPGSPKQSSI+KVSKLLDNYLAE+ALDSNL
Sbjct: 385  RIFSIFLNLDEDDDEDNHLRDESEMVYDFDSPGSPKQSSIIKVSKLLDNYLAEVALDSNL 444

Query: 558  IPSKFIALAELLPDHARIISDGLYRAVDIFLKVXXXXXXXXXXXXXXXXXXXXXXXVHPN 737
             PSKFIAL+ELLPDHARI++DGLYRA DIFLK                        VHPN
Sbjct: 445  TPSKFIALSELLPDHARIVNDGLYRAADIFLK------------------------VHPN 480

Query: 738  IKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 860
            IKDSERYRLCKTID QKLSQEACSHAAQNERLPVQMAVQVL
Sbjct: 481  IKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQVL 521


>ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform 1
            [Vitis vinifera] gi|296086620|emb|CBI32255.3| unnamed
            protein product [Vitis vinifera]
          Length = 631

 Score =  377 bits (968), Expect = e-102
 Identities = 202/281 (71%), Positives = 219/281 (77%)
 Frame = +3

Query: 18   MISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQRVTVEVIVSLLPTQSRKSTVPM 197
            +IS+ILINYA NSLQGL VRDPQLVK + LD+E QKKQRV VE IVSLLPTQSRKS+VPM
Sbjct: 241  LISKILINYAHNSLQGLAVRDPQLVKGSFLDLELQKKQRVIVEAIVSLLPTQSRKSSVPM 300

Query: 198  AFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILEDILIPTNSQSKNHQPLYETDTIV 377
            AFLSSLLKTAIS+SAS  CRSDLERR+GLQLDQAILEDILIP NS   NH P+Y+TD+I+
Sbjct: 301  AFLSSLLKTAISASASTACRSDLERRIGLQLDQAILEDILIPANSHGNNHGPIYDTDSIL 360

Query: 378  KTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQSSILKVSKLLDNYLAEIALDSNL 557
            + FSIF                    YDFDSPGSPKQSSI+KVSKLLDNYLAE+ALDSNL
Sbjct: 361  RIFSIFLNLDEDDDEDNHLRDESEMVYDFDSPGSPKQSSIIKVSKLLDNYLAEVALDSNL 420

Query: 558  IPSKFIALAELLPDHARIISDGLYRAVDIFLKVXXXXXXXXXXXXXXXXXXXXXXXVHPN 737
             PSKFIAL+ELLPDHARI++DGLYRA DIFLK                        VHPN
Sbjct: 421  TPSKFIALSELLPDHARIVNDGLYRAADIFLK------------------------VHPN 456

Query: 738  IKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 860
            IKDSERYRLCKTID QKLSQEACSHAAQNERLPVQMAVQVL
Sbjct: 457  IKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQVL 497


>ref|XP_002520669.1| protein binding protein, putative [Ricinus communis]
            gi|223540054|gb|EEF41631.1| protein binding protein,
            putative [Ricinus communis]
          Length = 631

 Score =  377 bits (967), Expect = e-102
 Identities = 200/281 (71%), Positives = 222/281 (79%)
 Frame = +3

Query: 18   MISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQRVTVEVIVSLLPTQSRKSTVPM 197
            MIS+ILINYA NSLQGL+VRDP L+K ++LD+E QKKQRV VE IVSLLPTQSRKS VPM
Sbjct: 240  MISKILINYAHNSLQGLVVRDPHLLKGSLLDLELQKKQRVIVEAIVSLLPTQSRKSPVPM 299

Query: 198  AFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILEDILIPTNSQSKNHQPLYETDTIV 377
            AFLSSLLKTAI++SA+ +CRSDLERR+GLQLDQAILEDILIP NS   +H  LY+TD+I+
Sbjct: 300  AFLSSLLKTAIAASATTSCRSDLERRIGLQLDQAILEDILIPANSHGNSHSTLYDTDSIL 359

Query: 378  KTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQSSILKVSKLLDNYLAEIALDSNL 557
            + FS+F                    YDFDSPGSPKQSSILKVSKLLDNYLAE+ALDSNL
Sbjct: 360  RIFSMFLNLDEDDDEDNHLRDESEMIYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNL 419

Query: 558  IPSKFIALAELLPDHARIISDGLYRAVDIFLKVXXXXXXXXXXXXXXXXXXXXXXXVHPN 737
            +PSKFI+LAELLPDHAR++SDGLYRAVDIFLK                        VHPN
Sbjct: 420  MPSKFISLAELLPDHARLVSDGLYRAVDIFLK------------------------VHPN 455

Query: 738  IKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 860
            IKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL
Sbjct: 456  IKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 496


>ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|222861131|gb|EEE98673.1|
            predicted protein [Populus trichocarpa]
          Length = 632

 Score =  372 bits (956), Expect = e-101
 Identities = 202/282 (71%), Positives = 220/282 (78%), Gaps = 1/282 (0%)
 Frame = +3

Query: 18   MISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQRVTVEVIVSLLPTQSRKSTVPM 197
            MIS+ILINYA NSLQGL+ RDPQLVK ++LD+E QKKQRV VE IVSLLPTQSRK  VPM
Sbjct: 241  MISKILINYAHNSLQGLVGRDPQLVKGSLLDLELQKKQRVIVEAIVSLLPTQSRKCPVPM 300

Query: 198  AFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILEDILIPTNSQSKNHQPLYETDTIV 377
            AFLSSLLKTAI+SSA+ +CRSDLERR+GLQLDQAILEDILIP NS   NH  +Y+TD+I+
Sbjct: 301  AFLSSLLKTAIASSATTSCRSDLERRIGLQLDQAILEDILIPANSHGNNHCTMYDTDSIL 360

Query: 378  KTFSIFXXXXXXXXXXXXXXXXXXXS-YDFDSPGSPKQSSILKVSKLLDNYLAEIALDSN 554
            + FSIF                     YDFDSPGSPKQSSILKVSKLLDN+LAE+ALDSN
Sbjct: 361  RIFSIFLNLDDEDDDEDNNLRDESEMVYDFDSPGSPKQSSILKVSKLLDNFLAEVALDSN 420

Query: 555  LIPSKFIALAELLPDHARIISDGLYRAVDIFLKVXXXXXXXXXXXXXXXXXXXXXXXVHP 734
            L+PSKFIALAELLPDHARI+ DGLYRAVDIFLK                        VHP
Sbjct: 421  LLPSKFIALAELLPDHARIVGDGLYRAVDIFLK------------------------VHP 456

Query: 735  NIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 860
            NIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL
Sbjct: 457  NIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVL 498


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