BLASTX nr result

ID: Coptis25_contig00016213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016213
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]   292   1e-76
ref|XP_002530358.1| conserved hypothetical protein [Ricinus comm...   279   1e-72
ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205...   245   2e-62
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-61
ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago ...   210   6e-52

>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score =  292 bits (748), Expect = 1e-76
 Identities = 177/431 (41%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
 Frame = -2

Query: 1287 MNFSEEWKSLWTINSVYSPPLLITKPSSKQLGPLLFTPSPKPQTKXXXXXXXXXXXXXXX 1108
            M+FSEEWKS+W I+SV++PPLLI+  S   LGPL F PSP   T                
Sbjct: 1    MDFSEEWKSIWPISSVFTPPLLIS--SKPSLGPLFFNPSPNTLTPLFSKPSFSFPPHLPR 58

Query: 1107 XXXXXXXXXXXXXXXXXXSNNLQLLKCSKTDFLLFFPTGDDLNRVGFVKLVWNGSKFDI- 931
                               + L LL+C     L  FPTG + +++GF+ L    S  D+ 
Sbjct: 59   SSLLH--------------DRLHLLRCPNAAVLALFPTGVNSDQIGFLLLSVKDSCLDVR 104

Query: 930  SDSDDDLMTTEHEFDDGLCQISVSAVSVDDFEAIGN-SVIGYLLASCLDTVHLYRVEIRN 754
            +D + D+  ++   +  + QI  + +    +   GN   +G +LA  + +VH + V  RN
Sbjct: 105  ADRNGDVFVSKKRLNHRIVQILATPIG---YSFSGNPDSVGLVLACTMYSVHWFSV--RN 159

Query: 753  SYTDFEKPVLAYLGSNEF-DCRVVHACWSPHLPEECLVLLETGDLFLFDMEGCVVAEEFP 577
               D E P L YLG   F  C VV ACWSPHL EECLVLLE+G+LFLFD++ C     F 
Sbjct: 160  DNIDSE-PGLIYLGGKVFKSCAVVSACWSPHLSEECLVLLESGELFLFDLDYCCSNSNF- 217

Query: 576  VDLEGTRIGVLLERFXXXXXXXXXXXXXKWLSCAFSWHPRIFIVACSTTVCQVDWRFEEN 397
               +G R+ ++                 KWL C FSWHPRI IVA S  V  VD RF+E 
Sbjct: 218  ---KGNRLKIMWHN-------ADCSGDGKWLGCEFSWHPRILIVARSDAVFLVDLRFDEC 267

Query: 396  DVSVLVKDDMFHLNSTVEDSQFIAFGMAGSDGFHFAVATENHLFLIDIRRPMMPVLQWAH 217
             VS L K  M  +   V    FI+F MAGS+GFHF VA+ + LFL DIR P++PVLQW+H
Sbjct: 268  SVSCLAKIGMPSVGELVHKEPFISFSMAGSNGFHFTVASNSLLFLYDIRNPLIPVLQWSH 327

Query: 216  DLHKPDYINVFKLSELRTMRKEDKYEWASDSGFAILLGSFLNFKFCIFCYGPPLPVADGS 37
             + KP Y+ VFKLSELR+  K+DKY+ AS+S F I++GSF   +  +FCYG       GS
Sbjct: 328  GIDKPCYVRVFKLSELRSHSKDDKYKEASESAFCIIMGSFWKCECRMFCYGSSFQDPKGS 387

Query: 36   VALQVPKFCNS 4
             A ++ K C S
Sbjct: 388  TAYEISKLCKS 398


>ref|XP_002530358.1| conserved hypothetical protein [Ricinus communis]
            gi|223530105|gb|EEF32019.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 912

 Score =  279 bits (714), Expect = 1e-72
 Identities = 176/461 (38%), Positives = 242/461 (52%), Gaps = 33/461 (7%)
 Frame = -2

Query: 1287 MNFSEEWKSLWTINSVYSPPLLITKPSSKQ-LGPLLFTPS-------------------P 1168
            M+ SEEWKSL+ I SV+  PLL++ P+SK  LGPL F P+                   P
Sbjct: 1    MDLSEEWKSLFPIGSVFDAPLLLSSPTSKSILGPLFFNPNRKTLTQLYKSPSLFPPLLNP 60

Query: 1167 KPQ-------TKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNLQLLKCSKTD-F 1012
             P+       T                                   N LQ L C   +  
Sbjct: 61   PPRLSLSRFLTTSTTFDSPIPLSTASSITSRLGSQFHDNSASLLAHNQLQFLNCPHDNSV 120

Query: 1011 LLFFPTGDDLNRVGFVKLVWNGSKF-DISDSDDDLMTTEHEFDDGLCQISVSAVSVDDFE 835
            ++FF TG + ++VGF+ L  N  +   + DS   +       +  + +I V+ V VD   
Sbjct: 121  IVFFSTGCNHDQVGFLLLSVNDKRLCAVGDSRGGVFVANKCLNQRIVKILVNPV-VDSGY 179

Query: 834  AIGNS---VIGYLLASCLDTVHLYRVEIRNSYTDFEKPVLAYLGSNEF-DCRVVHACWSP 667
              GN+   ++GYLL   L +VH + V+I       E+P+L ++G   F  C +V ACWSP
Sbjct: 180  FEGNASSKIVGYLLVYTLFSVHWFCVKIGEIN---ERPILGHVGCKTFKSCSIVDACWSP 236

Query: 666  HLPEECLVLLETGDLFLFDMEGCVVAEEFPVDLEGTRIGVLLERFXXXXXXXXXXXXXKW 487
            HL EE +VLLE G LFLFD+     ++       GT++ VL +                W
Sbjct: 237  HLIEESVVLLENGGLFLFDLN----SDSSNAYFRGTKLKVLWDDLGKSKNFK-------W 285

Query: 486  LSCAFSWHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVEDSQFIAFGMAGS 307
            L C FSWHPRI IVA S  V  VDWR++E  V+ L   DMF + + VE+ +F+ F MA S
Sbjct: 286  LGCQFSWHPRILIVASSDAVFLVDWRYDEFKVTCLANIDMFGVYAPVENERFLTFSMAVS 345

Query: 306  DGFHFAVATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSELRTMRKEDKYEWASD 127
            D F F +A+EN L L D+R+P+MPVLQWAH L +P YI+VF+LSELR+  +   +EWA+ 
Sbjct: 346  DHFQFVLASENMLALCDVRKPLMPVLQWAHALDRPCYIDVFRLSELRSNSRNSIHEWATT 405

Query: 126  SGFAILLGSFLNFKFCIFCYGPPLPVADGSVALQVPKFCNS 4
            SGF I+LGSF N +F +FCYGPPLP   GS+A ++ K   S
Sbjct: 406  SGFGIILGSFWNCEFSLFCYGPPLPGQQGSIASEISKISKS 446


>ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205354 [Cucumis sativus]
          Length = 907

 Score =  245 bits (625), Expect = 2e-62
 Identities = 169/455 (37%), Positives = 236/455 (51%), Gaps = 31/455 (6%)
 Frame = -2

Query: 1275 EEWKSLWTINSVYSPPLLITKPS----------------------SKQLGPLLFTPSPKP 1162
            EEWKSL+ I +V+  PLLI+  S                      S+ L P L  PS   
Sbjct: 4    EEWKSLFPIGTVFKSPLLISGSSVKNSIGPLVFNPVPTSLTRLFSSQSLLPSLSPPSVLN 63

Query: 1161 QTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-NNLQLLKC-SKTDFLLFFPTGD 988
              +                                   N LQ L C + +  ++FFPTG 
Sbjct: 64   LPRFLLTSSSVVPSTSSSVASLFGEQQCCSDPPSVLRYNRLQCLPCPNSSSVVVFFPTGP 123

Query: 987  DLNRVGFVKLVWNGSKFDI-SDSDDDLMTTEHEFDDGLCQISVSAVS--VDDFEAIGNSV 817
            + + VGF+ +  NGS  D+ SD  +D+ + E E +  +  I+V+  S  VDD        
Sbjct: 124  NSDHVGFLVVSSNGSGLDVQSDCSNDVFSVESELNYQIFGIAVNPNSGFVDD----SYED 179

Query: 816  IGYLLASCLDTVHLYRVEIRNSYTDFEKPV-LAYLGSNEFD-CRVVHACWSPHLPEECLV 643
            IG+LLA  + +V  + V+     +  +  V L ++GS  F  C VVHACW+PHL EE +V
Sbjct: 180  IGFLLAYTMYSVEWFIVKNHAIGSSCQPRVSLVHMGSKVFKTCSVVHACWNPHLSEESVV 239

Query: 642  LLETGDLFLFDMEGCVVAEEFP--VDLEGTRIGVLLERFXXXXXXXXXXXXXKWLSCAFS 469
            LLE G LFLFDME  +  +++   V+L+G ++ V  +                WLSC FS
Sbjct: 240  LLEDGSLFLFDMEPLLKTKDYNANVNLKGIKLKVSWDGLDCSKKVK-------WLSCEFS 292

Query: 468  WHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVEDSQFIAFGMAGSDGFHFA 289
            WHPRI IVA S  V  VD R  + ++S L+K + F   S  E  QF+AF  AGSDGF+F+
Sbjct: 293  WHPRILIVARSDAVFLVDLRENDCNISCLMKIETFPTYSLGEKEQFLAFSKAGSDGFYFS 352

Query: 288  VATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSELRTMRKEDKYEWASDSGFAIL 109
            +A+ + L L DIR+P+ PVLQW H L  P Y+NVF LSELR+      Y+ AS+SG+ I+
Sbjct: 353  IASNHLLLLCDIRKPLSPVLQWTHGLDDPSYMNVFSLSELRSSPGNIMYKVASESGYCIV 412

Query: 108  LGSFLNFKFCIFCYGPPLPVADGSVALQVPKFCNS 4
            LGSF + +F IFCYGP  P  D S++ +  K+  S
Sbjct: 413  LGSFWSSEFNIFCYGPSPPGLDQSISSRSSKYFQS 447


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
            predicted protein [Populus trichocarpa]
          Length = 906

 Score =  241 bits (615), Expect = 3e-61
 Identities = 157/463 (33%), Positives = 228/463 (49%), Gaps = 34/463 (7%)
 Frame = -2

Query: 1287 MNFSEEWKSLWTINSVYSPPLLITKPSSKQ----------------------LGPLLFTP 1174
            + FS+EWKS + I++V   PLL++K +S+                       L P L  P
Sbjct: 4    IEFSQEWKSGFPIDTVSKAPLLLSKQTSESLIGPLVFNPIPESLAHLFTSPALSPPLLNP 63

Query: 1173 SPKPQ-----TKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNLQLLKCSKTD-F 1012
             P        +                                   N LQ LKC   D  
Sbjct: 64   PPHLSLTRFISTSTLADSPLPLSTASSIAFSFGPQDLHFSSPLLAYNRLQFLKCPHDDTV 123

Query: 1011 LLFFPTGDDLNRVGFVKL-VWNGSKFDISDSDDDLMTTEHEFDDGLCQISVSAVSVDDFE 835
            ++FF TG +L+RVGF+ L V + S     D    + T        + ++ V+ +  D F 
Sbjct: 124  VVFFSTGTNLDRVGFLLLSVKDKSLVATGDQKGGIFTASKSLGSKIVRVLVNPIEDDSF- 182

Query: 834  AIGN----SVIGYLLASCLDTVHLYRVEIRNSYTDFEKPVLAYLGSNEF-DCRVVHACWS 670
              GN       GYLL   + +V+ + V+   S    ++PVL+YLG   F  C +  ACWS
Sbjct: 183  LNGNYSFSGSFGYLLVYTMYSVNWFCVKYSES---MKRPVLSYLGCKNFKSCGIASACWS 239

Query: 669  PHLPEECLVLLETGDLFLFDMEGCVVAEEFPVDLEGTRIGVLLERFXXXXXXXXXXXXXK 490
            P++  + +VLLE G LFLFD+E    A+   +   GT++ V                  K
Sbjct: 240  PYIKVQSVVLLENGTLFLFDLE----ADCSDMYFRGTKLKV-------SWGDEGKLGDGK 288

Query: 489  WLSCAFSWHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVEDSQFIAFGMAG 310
            WL C FSWH R+ IVA S  V  +DW+    DV+ L + DMF   +  E  +F+A   A 
Sbjct: 289  WLGCEFSWHCRVLIVARSDAVFMIDWKCGGFDVTCLARIDMFSAYALSEKERFLAMSRAV 348

Query: 309  SDGFHFAVATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSELRTMRKEDKYEWAS 130
            SD  HF + +E  L + D+R+PM+P+LQWAH L KP +I+VF+LS+LR+  ++D ++WA+
Sbjct: 349  SDSLHFVLVSETMLVICDVRKPMIPLLQWAHGLDKPCFIDVFRLSDLRSNSRDDTHDWAN 408

Query: 129  DSGFAILLGSFLNFKFCIFCYGPPLPVADGSVALQVPKFCNSL 1
             SGF I+LGSF N +F +FCYGP  P   GS AL++ KF + L
Sbjct: 409  SSGFGIILGSFWNCEFSLFCYGPSFPPRKGSFALEISKFSSCL 451


>ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago truncatula]
            gi|355489812|gb|AES71015.1| hypothetical protein
            MTR_3g069120 [Medicago truncatula]
          Length = 884

 Score =  210 bits (535), Expect = 6e-52
 Identities = 133/336 (39%), Positives = 185/336 (55%), Gaps = 6/336 (1%)
 Frame = -2

Query: 1050 NNLQLLKCSKTD-FLLFFPTGDDLNRVGFVKLVWNGSKFDIS-DSDDDLMTTEHEFDDGL 877
            N +QLLKC  T   ++ FPTG +   +GF  L    S  +   D   D+          +
Sbjct: 101  NRIQLLKCPNTPKAVVIFPTGANDETIGFFMLGVKDSLLETRLDVKGDVFRASTGSSSRI 160

Query: 876  CQISVSAVSVDDFEAIGNSVIGYLLASCLDTVHLYRVEIRNSYTDFEKPVLAYLG-SNEF 700
             ++SV+ V+ DD E   + VIGY+LAS   +V  + V+   S    + P ++YLG S  F
Sbjct: 161  LRMSVNPVTEDDSEPDSSPVIGYVLASSRYSVCWFDVKHNLSS---DSPSMSYLGRSKVF 217

Query: 699  DCRVVHACWSPHLPEECLVLLETGDLFLFDMEGCVVAEEFPVDLEGTRIGVLLERFXXXX 520
               VV ACWSPH+ EE +VLLE+G LFLFD++     + F    +GTR+ V         
Sbjct: 218  KEAVVRACWSPHILEESMVLLESGQLFLFDVDAQGSMKTF----KGTRLRV-------PW 266

Query: 519  XXXXXXXXXKWLSCAFSWHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVED 340
                      WLSC FSWHPRI IVA    V  VD+R  E +V+ L+K +   + +  E+
Sbjct: 267  NDSACSENKAWLSCEFSWHPRILIVARYDAVFLVDFRSNECNVTCLLKIETLRMYAPDEN 326

Query: 339  SQFIAFGMAGS---DGFHFAVATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSEL 169
             +F+A    G+   D F+F V + + L L DIR P+ PVLQW H + +P Y+ V  LS L
Sbjct: 327  ERFLALSRVGTESPDNFYFTVTSRSLLVLCDIRNPLKPVLQWRHGIDEPCYMTVLSLSTL 386

Query: 168  RTMRKEDKYEWASDSGFAILLGSFLNFKFCIFCYGP 61
            R+  KED ++ AS+ GF I+LGSF N +F IFCYGP
Sbjct: 387  RSHSKEDTFQLASEMGFCIILGSFWNSEFNIFCYGP 422


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