BLASTX nr result

ID: Coptis25_contig00016201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016201
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316134.1| predicted protein [Populus trichocarpa] gi|2...   119   9e-25
ref|XP_002522444.1| transferase, transferring glycosyl groups, p...   118   2e-24
ref|XP_002311304.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_002269607.1| PREDICTED: beta-1,3-galactosyltransferase 15...   114   4e-23
ref|XP_003613808.1| Beta-1,3-galactosyltransferase [Medicago tru...   108   2e-21

>ref|XP_002316134.1| predicted protein [Populus trichocarpa] gi|222865174|gb|EEF02305.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  119 bits (298), Expect = 9e-25
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = -2

Query: 383 MKRWYGGXXXXXXXXXXXLRYGLMNDPIGEAXXXXXXXXXXXXLEWVHDGTPET-QISDN 207
           MK+WYGG           LRYGL+ +PIG              LEWVH   P   Q  + 
Sbjct: 1   MKKWYGGVLVASLFMLLILRYGLLKNPIGGNILLNPSSNASKPLEWVHPAVPPAVQNPET 60

Query: 206 SSLVFSSDILVSSLFTRKNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWNS 27
           SS VFS+D +VSSLF  +N S+EE+++LQTWN L+HLI HA+V  N +EAIKEAG AW+S
Sbjct: 61  SSQVFSTDTIVSSLFAPRNISNEEHKSLQTWNLLKHLIDHAQVFANGVEAIKEAGNAWSS 120

Query: 26  LVTSVEEQ 3
           L+ S EE+
Sbjct: 121 LMASAEEE 128


>ref|XP_002522444.1| transferase, transferring glycosyl groups, putative [Ricinus
           communis] gi|223538329|gb|EEF39936.1| transferase,
           transferring glycosyl groups, putative [Ricinus
           communis]
          Length = 631

 Score =  118 bits (295), Expect = 2e-24
 Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = -2

Query: 389 VKMKRWYGGXXXXXXXXXXXLRYGLMNDPIGEAXXXXXXXXXXXXLEWVHDGTPET-QIS 213
           +KMKRWYGG           LRY LM +PIG++            L+WV    P T +I 
Sbjct: 1   MKMKRWYGGVLIASLFMLLILRYSLMKNPIGDSYLMNAFSNGTNPLQWVQSTLPPTVKIP 60

Query: 212 DNSSLVFSSDILVSSLFTRKNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAW 33
           +NS+ V S++ +V SLF ++N S+EE  +LQTWN L+HLI  A +LPN +EAIKEAG AW
Sbjct: 61  ENSAKVISTETIVFSLFAQRNISNEEQVSLQTWNLLKHLIDQAHLLPNGVEAIKEAGSAW 120

Query: 32  NSLVTSVEEQ 3
           N+L+ S+EE+
Sbjct: 121 NNLMASIEEE 130


>ref|XP_002311304.1| predicted protein [Populus trichocarpa] gi|222851124|gb|EEE88671.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  114 bits (286), Expect = 2e-23
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = -2

Query: 383 MKRWYGGXXXXXXXXXXXLRYGLMNDPIGEAXXXXXXXXXXXXLEWVHDG-TPETQISDN 207
           MK+ Y G           LRYGL+ +PIGE              EWVH    P  Q  +N
Sbjct: 1   MKKRYSGVLFASLFMLLVLRYGLLKNPIGEIYSLSPSNASKPL-EWVHPAFQPAVQNPEN 59

Query: 206 SSLVFSSDILVSSLFTRKNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWNS 27
           SS VFS+D +VSSLF  +N S+EE ++LQTWN L+HLI HA+VL N +EAIKEAG AW+S
Sbjct: 60  SSQVFSTDTIVSSLFALRNISNEEQKSLQTWNLLKHLIDHAQVLSNGVEAIKEAGNAWSS 119

Query: 26  LVTSVEEQ 3
           L+ S+EE+
Sbjct: 120 LMASIEEE 127


>ref|XP_002269607.1| PREDICTED: beta-1,3-galactosyltransferase 15 [Vitis vinifera]
           gi|296086360|emb|CBI31949.3| unnamed protein product
           [Vitis vinifera]
          Length = 636

 Score =  114 bits (284), Expect = 4e-23
 Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
 Frame = -2

Query: 383 MKRWYGGXXXXXXXXXXXLRYGLMNDPIGEAXXXXXXXXXXXXL-EWVHDGT-PETQISD 210
           MK+WYGG           LRY  M +PI ++              EW++ G  P  Q  +
Sbjct: 1   MKKWYGGGLIASLFMLLVLRYVFMKNPISDSYLTSPFSSNSTNPLEWINAGVLPVVQNPE 60

Query: 209 NSSLVFSSDILVSSLFTRKNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWN 30
           N+S V S+D +VSSLF  +N S EE ++L TW+HL++LI HA+VLPNA+EAIKEAG+AW 
Sbjct: 61  NASQVISADSIVSSLFGLRNISDEEQQSLHTWDHLKYLINHAQVLPNALEAIKEAGIAWT 120

Query: 29  SLVTSVEEQ 3
           SL+ SVEE+
Sbjct: 121 SLLASVEEE 129


>ref|XP_003613808.1| Beta-1,3-galactosyltransferase [Medicago truncatula]
           gi|355515143|gb|AES96766.1|
           Beta-1,3-galactosyltransferase [Medicago truncatula]
          Length = 639

 Score =  108 bits (270), Expect = 2e-21
 Identities = 65/132 (49%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
 Frame = -2

Query: 383 MKRWYGGXXXXXXXXXXXL---RYGLMNDPIGEAXXXXXXXXXXXXL-EWVHDGTPETQI 216
           MK+ YGG           L   RYG+M +PIGE               EW++   P    
Sbjct: 1   MKKLYGGVLIASSFTLFMLMILRYGVMKNPIGEGYLTIPVLINGTNPLEWINPVIPPAIH 60

Query: 215 SD-NSSLVFSSDILVSSLFTRKNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGV 39
           +   +S V S+DILVSSLF R NFS +E +TLQTWNHL+HLI H + LP+A EAIKEA  
Sbjct: 61  NPVATSQVISADILVSSLFARNNFSKQEQQTLQTWNHLKHLIDHVQGLPSATEAIKEAAS 120

Query: 38  AWNSLVTSVEEQ 3
           AWNSLV+SVEEQ
Sbjct: 121 AWNSLVSSVEEQ 132


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