BLASTX nr result
ID: Coptis25_contig00016195
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016195 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802... 79 2e-22 ref|XP_003625728.1| Chromodomain-helicase-DNA-binding protein [M... 79 1e-21 gb|AFK42030.1| unknown [Lotus japonicus] 80 1e-21 emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera] 79 3e-21 ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248... 79 3e-21 >ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802562 [Glycine max] Length = 796 Score = 79.0 bits (193), Expect(2) = 2e-22 Identities = 37/70 (52%), Positives = 52/70 (74%) Frame = -3 Query: 302 RSIKAQDFGGMYCAVLAVK*LNSTVVTVATLPIFEPEIAEIPLVVATSDNQGLDYFQSLF 123 R+++ Q+FGGMYCA+L V NS+VV+ L IF ++AE+PLV ++ N G YFQ+LF Sbjct: 666 RNVRGQEFGGMYCALLIV---NSSVVSAGMLRIFGSDVAELPLVATSNGNHGKGYFQTLF 722 Query: 122 ACIERLMGFL 93 +CIERL+ FL Sbjct: 723 SCIERLLAFL 732 Score = 52.0 bits (123), Expect(2) = 2e-22 Identities = 22/31 (70%), Positives = 28/31 (90%) Frame = -1 Query: 94 LNVKNTVLASAEESKSIWTDKFGFKKISPDQ 2 LNVKN VL +AEE++SIWTDKFGF K++PD+ Sbjct: 732 LNVKNLVLPAAEEAESIWTDKFGFSKMNPDE 762 >ref|XP_003625728.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|355500743|gb|AES81946.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] Length = 730 Score = 78.6 bits (192), Expect(2) = 1e-21 Identities = 37/71 (52%), Positives = 52/71 (73%) Frame = -3 Query: 302 RSIKAQDFGGMYCAVLAVK*LNSTVVTVATLPIFEPEIAEIPLVVATSDNQGLDYFQSLF 123 +S++ Q+FGGMYCA+L V NS+VV+ L IF +IAE+PLV ++ G YFQ+LF Sbjct: 600 KSVRGQEFGGMYCALLIV---NSSVVSAGMLRIFGTDIAELPLVATSNSQHGKGYFQALF 656 Query: 122 ACIERLMGFLK 90 +CIERL+ F+K Sbjct: 657 SCIERLLAFMK 667 Score = 49.7 bits (117), Expect(2) = 1e-21 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = -1 Query: 94 LNVKNTVLASAEESKSIWTDKFGFKKISPDQ 2 + VKN VL +AEE++SIWTDKFGF KI PD+ Sbjct: 666 MKVKNLVLPAAEEAQSIWTDKFGFSKIKPDE 696 >gb|AFK42030.1| unknown [Lotus japonicus] Length = 135 Score = 80.1 bits (196), Expect(2) = 1e-21 Identities = 37/70 (52%), Positives = 53/70 (75%) Frame = -3 Query: 302 RSIKAQDFGGMYCAVLAVK*LNSTVVTVATLPIFEPEIAEIPLVVATSDNQGLDYFQSLF 123 R+++ Q+FGGMYCA+L V NS+VV+ A L IF ++AE+PLV ++ N G YFQ+LF Sbjct: 5 RNVRGQEFGGMYCALLVV---NSSVVSAAMLRIFGSDVAELPLVATSNGNHGKGYFQTLF 61 Query: 122 ACIERLMGFL 93 +CIERL+ F+ Sbjct: 62 SCIERLLAFM 71 Score = 47.8 bits (112), Expect(2) = 1e-21 Identities = 19/31 (61%), Positives = 27/31 (87%) Frame = -1 Query: 94 LNVKNTVLASAEESKSIWTDKFGFKKISPDQ 2 +NVK+ VL +AEE++SIWTDKFGF ++ PD+ Sbjct: 71 MNVKSLVLPAAEEAESIWTDKFGFSRMKPDE 101 >emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera] Length = 2427 Score = 78.6 bits (192), Expect(2) = 3e-21 Identities = 37/70 (52%), Positives = 50/70 (71%) Frame = -3 Query: 302 RSIKAQDFGGMYCAVLAVK*LNSTVVTVATLPIFEPEIAEIPLVVATSDNQGLDYFQSLF 123 R+++ QDF G+YCAV+ V NS VV+ L +F E+AE+PLV + DNQG YFQ LF Sbjct: 2297 RNVRGQDFSGLYCAVITV---NSHVVSAGILRVFGQEVAELPLVATSVDNQGRGYFQILF 2353 Query: 122 ACIERLMGFL 93 +CIE+L+ FL Sbjct: 2354 SCIEKLLAFL 2363 Score = 48.1 bits (113), Expect(2) = 3e-21 Identities = 21/31 (67%), Positives = 27/31 (87%) Frame = -1 Query: 94 LNVKNTVLASAEESKSIWTDKFGFKKISPDQ 2 LNV++ VL +AEE++ IWT KFGFKKI+PDQ Sbjct: 2363 LNVRSFVLPAAEEAECIWTKKFGFKKITPDQ 2393 >ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera] Length = 2411 Score = 78.6 bits (192), Expect(2) = 3e-21 Identities = 37/70 (52%), Positives = 50/70 (71%) Frame = -3 Query: 302 RSIKAQDFGGMYCAVLAVK*LNSTVVTVATLPIFEPEIAEIPLVVATSDNQGLDYFQSLF 123 R+++ QDF G+YCAV+ V NS VV+ L +F E+AE+PLV + DNQG YFQ LF Sbjct: 2281 RNVRGQDFSGLYCAVITV---NSHVVSAGILRVFGQEVAELPLVATSVDNQGRGYFQILF 2337 Query: 122 ACIERLMGFL 93 +CIE+L+ FL Sbjct: 2338 SCIEKLLAFL 2347 Score = 48.1 bits (113), Expect(2) = 3e-21 Identities = 21/31 (67%), Positives = 27/31 (87%) Frame = -1 Query: 94 LNVKNTVLASAEESKSIWTDKFGFKKISPDQ 2 LNV++ VL +AEE++ IWT KFGFKKI+PDQ Sbjct: 2347 LNVRSFVLPAAEEAECIWTKKFGFKKITPDQ 2377