BLASTX nr result
ID: Coptis25_contig00016192
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016192 (2476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22283.3| unnamed protein product [Vitis vinifera] 602 e-169 ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 602 e-169 ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2... 558 e-156 ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 545 e-152 ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 545 e-152 >emb|CBI22283.3| unnamed protein product [Vitis vinifera] Length = 626 Score = 602 bits (1553), Expect = e-169 Identities = 322/587 (54%), Positives = 411/587 (70%), Gaps = 22/587 (3%) Frame = +3 Query: 357 CPC-PRCFHH------------GHSISYV----NGKTKRN--SGILVGQNNIGGQFVYRS 479 C C PRC + GH + + NG+++ I++ N + G + Sbjct: 35 CSCFPRCLCYNSTIKTNKKQLKGHGVDTISLRENGRSQFEVTGHIMMEMNLLFGSERRDT 94 Query: 480 ARIKVNMVMVAGLXXXXXXXXXXGDIIILERKGEAVGLSYEQKLPPRGNAVNEEGIGFEV 659 RI NMV A + +++ RK E +EQK PP GN+ + FE Sbjct: 95 PRIVSNMV--ACVQSGLVCEEDEENMLNQRRKEEFDPSYFEQKFPPLGNSEIHKNPDFEH 152 Query: 660 NG-AEPISDYVSLVCEVETSLHFLEERDEEILSQRILGLSRSNKVRSALELHKSMEASGL 836 G AEP++ + E E LHFLEER+E+ILS+RIL LSRSNKVRS LEL+++ME SGL Sbjct: 153 IGVAEPLTISTGISSEFEDKLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGL 212 Query: 837 QPNAHXXXXXXXXXXRNGFLNDALKIFEAMK-KEVTSGHTYSLILKAVASTQGYDSALKL 1013 QP++H RN L+DAL++FE+MK E T+GH+YSL+LKA+A+ QGYDSALK+ Sbjct: 213 QPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTGHSYSLVLKAIANIQGYDSALKM 272 Query: 1014 FIKLEGE-GAENVFDAITYNTMLSICSKENNWLQAERVWKKLKENGHKATTVTYRLLVCT 1190 F KLE E + FD I Y TM+SIC K NNW Q ER+W+ +KENG T VTYRLLV Sbjct: 273 FSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSV 332 Query: 1191 FARCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 1370 F RCGQ ELA DAYSEM++N L+P ED M+A+I C KE KW LA ++FQ+ML GL PN Sbjct: 333 FVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPN 392 Query: 1371 IVAYNSLINSLGKAGEVELAFNVFGLMKLSGHTPDAYTWNALLGALNRGNRYMDALWLFG 1550 ++A N+LINS+GK+G V+LAF V+ +MK GHTPD YTWNALLGAL R N++ DAL LF Sbjct: 393 LIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFE 452 Query: 1551 SIKRKKSTLLNFHLYNTALMSCQRLGFWERSLQILWQMEASGLPVSVESYNLVVSACEAA 1730 SI R++S+ +N HLYNTALMSCQ+LG W R+LQ+LWQMEASGL VS SYNLV+ ACE A Sbjct: 453 SI-REQSSQVNLHLYNTALMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVA 511 Query: 1731 RKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLWSELQEILNHVPGDVSLYNAAIH 1910 RKP++ALQVYE MV ++CTPDTFT+LSLIR+C+WGSLW+E++EILN DVSLYNAAI Sbjct: 512 RKPEIALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQ 571 Query: 1911 GMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLKSNSSRQKSR 2051 GMCLRG+ SA+K+Y +MR+ GLKPDGKTRALM+QNL+ ++ R +R Sbjct: 572 GMCLRGKIESAKKLYMRMRKSGLKPDGKTRALMLQNLQKDAIRPSNR 618 >ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Vitis vinifera] Length = 546 Score = 602 bits (1551), Expect = e-169 Identities = 304/497 (61%), Positives = 379/497 (76%), Gaps = 3/497 (0%) Frame = +3 Query: 570 RKGEAVGLSYEQKLPPRGNAVNEEGIGFEVNG-AEPISDYVSLVCEVETSLHFLEERDEE 746 RK E +EQK PP GN+ + FE G AEP++ + E E LHFLEER+E+ Sbjct: 43 RKEEFDPSYFEQKFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFEDKLHFLEERNEQ 102 Query: 747 ILSQRILGLSRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAM 926 ILS+RIL LSRSNKVRS LEL+++ME SGLQP++H RN L+DAL++FE+M Sbjct: 103 ILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESM 162 Query: 927 K-KEVTSGHTYSLILKAVASTQGYDSALKLFIKLEGE-GAENVFDAITYNTMLSICSKEN 1100 K E T+GH+YSL+LKA+A+ QGYDSALK+F KLE E + FD I Y TM+SIC K N Sbjct: 163 KANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVN 222 Query: 1101 NWLQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQ 1280 NW Q ER+W+ +KENG T VTYRLLV F RCGQ ELA DAYSEM++N L+P ED M+ Sbjct: 223 NWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMK 282 Query: 1281 AMISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLS 1460 A+I C KE KW LA ++FQ+ML GL PN++A N+LINS+GK+G V+LAF V+ +MK Sbjct: 283 AIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSL 342 Query: 1461 GHTPDAYTWNALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNTALMSCQRLGFWER 1640 GHTPD YTWNALLGAL R N++ DAL LF SI R++S+ +N HLYNTALMSCQ+LG W R Sbjct: 343 GHTPDVYTWNALLGALYRANQHADALHLFESI-REQSSQVNLHLYNTALMSCQKLGLWNR 401 Query: 1641 SLQILWQMEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIR 1820 +LQ+LWQMEASGL VS SYNLV+ ACE ARKP++ALQVYE MV ++CTPDTFT+LSLIR Sbjct: 402 ALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLIR 461 Query: 1821 ACVWGSLWSELQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTR 2000 +C+WGSLW+E++EILN DVSLYNAAI GMCLRG+ SA+K+Y +MR+ GLKPDGKTR Sbjct: 462 SCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKTR 521 Query: 2001 ALMIQNLKSNSSRQKSR 2051 ALM+QNL+ ++ R +R Sbjct: 522 ALMLQNLQKDAIRPSNR 538 >ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1| predicted protein [Populus trichocarpa] Length = 487 Score = 558 bits (1437), Expect = e-156 Identities = 277/451 (61%), Positives = 346/451 (76%), Gaps = 2/451 (0%) Frame = +3 Query: 708 ETSLHFLEERDEEILSQRILGLSRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRN 887 E+ +HFLEE DE LS+RIL LSRSNK+RSAL+L +SME SGLQPN H R+ Sbjct: 36 ESRVHFLEETDENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRH 95 Query: 888 GFLNDALKIFEAMKK-EVTSGHTYSLILKAVASTQGYDSALKLFIKLEGEGAENV-FDAI 1061 DAL++FE MKK E+T+GH YSLILKAVAST+G DSAL +F +LE E FD I Sbjct: 96 ELHEDALRVFEYMKKNEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVI 155 Query: 1062 TYNTMLSICSKENNWLQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEM 1241 YNTM+S+C KE NW++ ER+W+ +KEN + T VTY LLV F RCG+ ELA +AYSEM Sbjct: 156 VYNTMISVCGKEKNWVETERIWRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEM 215 Query: 1242 VRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEV 1421 V+N L+P ED + A+I C+K+ W LA NIFQ ML GL PN++A N+LIN LGKAGE+ Sbjct: 216 VQNGLKPREDTLHAVIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEI 275 Query: 1422 ELAFNVFGLMKLSGHTPDAYTWNALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNT 1601 +LAF VF ++K GHTPD YTWNALL L R N+++DAL LF +KR++++LLN HLYNT Sbjct: 276 KLAFKVFKILKSLGHTPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLNEHLYNT 335 Query: 1602 ALMSCQRLGFWERSLQILWQMEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKK 1781 ALMSCQ+LG W+R+LQ++WQ EASGL VS SYNL + ACE ARKP+VAL+VYE MVH+K Sbjct: 336 ALMSCQKLGLWDRALQLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQK 395 Query: 1782 CTPDTFTYLSLIRACVWGSLWSELQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKK 1961 C PDTFTYLSLIR+C+W SLW E++EIL+ V DVSLYNA IHGMCLRG+T SA+K+Y K Sbjct: 396 CPPDTFTYLSLIRSCIWASLWDEVEEILDQVAPDVSLYNAVIHGMCLRGKTESAKKLYMK 455 Query: 1962 MREGGLKPDGKTRALMIQNLKSNSSRQKSRY 2054 M + GLKPDG ALM+QNL+ NS++ +SR+ Sbjct: 456 MGKSGLKPDG---ALMLQNLRKNSTK-RSRF 482 >ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Cucumis sativus] Length = 600 Score = 545 bits (1403), Expect = e-152 Identities = 272/490 (55%), Positives = 353/490 (72%), Gaps = 1/490 (0%) Frame = +3 Query: 594 SYEQKLPPRGNAVNEEGIGFEVNGAEPISDYVSLVCEVETSLHFLEERDEEILSQRILGL 773 S E KLPP G+ +++ F+ V E E+ LHFLEE D+ +LS+RIL L Sbjct: 100 SREWKLPPWGDIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILIL 159 Query: 774 SRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMK-KEVTSGH 950 SR NKVRSALEL +SM+ +GL P+ H RN D L+IFE MK E+++GH Sbjct: 160 SRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGH 219 Query: 951 TYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNWLQAERVWK 1130 TYSL+LKAVA+ G+ SAL++F E + FDAI YNTM+SIC K+NNW++AER W+ Sbjct: 220 TYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWR 279 Query: 1131 KLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEE 1310 +++NG AT +TY LLV TF RC Q ELA D Y +MV+N +P D MQA+I +KE Sbjct: 280 LMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEG 339 Query: 1311 KWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGHTPDAYTWN 1490 KW A +FQ MLK GL PN V++N+LIN+LGKA EV LAF+V+ +MK GH+PD YTWN Sbjct: 340 KWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWN 399 Query: 1491 ALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNTALMSCQRLGFWERSLQILWQMEA 1670 ALLGAL + NRY DA+ LF +KR+K LN H+YNT LMSC +LG WER++QILW+ME Sbjct: 400 ALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTILMSCSKLGLWERAVQILWEMEV 458 Query: 1671 SGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLWSE 1850 SGL +S SYN+V++ACE ARKP++ALQVYE+MVH+K TPDTFT+LSLIR C+WGSLW E Sbjct: 459 SGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSLIRCCIWGSLWDE 518 Query: 1851 LQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLKSN 2030 ++ +LN DVS+YN I GMCLRG++ A+K+Y KMRE G++PDGKTRALM+QNL + Sbjct: 519 VELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKD 578 Query: 2031 SSRQKSRYPS 2060 +R+K+R+ S Sbjct: 579 PARRKNRWAS 588 Score = 81.6 bits (200), Expect = 9e-13 Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 3/274 (1%) Frame = +3 Query: 756 QRILGLS-RSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMKK 932 Q I+G S + K AL + + M GLQPN+ + + A ++ MK Sbjct: 329 QAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKS 388 Query: 933 EVTSG--HTYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNW 1106 S +T++ +L A+ Y A+ LF ++ E + + YNT+L CSK W Sbjct: 389 MGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQ--LNIHIYNTILMSCSKLGLW 446 Query: 1107 LQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAM 1286 +A ++ +++ +G +T +Y +++ + E+A Y MV KL P ++ Sbjct: 447 ERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSL 506 Query: 1287 ISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGH 1466 I C WG + + +L P++ YN +I + G+ +LA ++ M+ +G Sbjct: 507 IRCCI----WGSLWDEVELLLNKSA-PDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGI 561 Query: 1467 TPDAYTWNALLGALNRGNRYMDALWLFGSIKRKK 1568 PD T +L L + W G KR++ Sbjct: 562 QPDGKTRALMLQNLPKDPARRKNRWASGFKKRQR 595 >ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Cucumis sativus] Length = 600 Score = 545 bits (1403), Expect = e-152 Identities = 272/490 (55%), Positives = 353/490 (72%), Gaps = 1/490 (0%) Frame = +3 Query: 594 SYEQKLPPRGNAVNEEGIGFEVNGAEPISDYVSLVCEVETSLHFLEERDEEILSQRILGL 773 S E KLPP G+ +++ F+ V E E+ LHFLEE D+ +LS+RIL L Sbjct: 100 SREWKLPPWGDIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILIL 159 Query: 774 SRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMK-KEVTSGH 950 SR NKVRSALEL +SM+ +GL P+ H RN D L+IFE MK E+++GH Sbjct: 160 SRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGH 219 Query: 951 TYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNWLQAERVWK 1130 TYSL+LKAVA+ G+ SAL++F E + FDAI YNTM+SIC K+NNW++AER W+ Sbjct: 220 TYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWR 279 Query: 1131 KLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEE 1310 +++NG AT +TY LLV TF RC Q ELA D Y +MV+N +P D MQA+I +KE Sbjct: 280 LMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEG 339 Query: 1311 KWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGHTPDAYTWN 1490 KW A +FQ MLK GL PN V++N+LIN+LGKA EV LAF+V+ +MK GH+PD YTWN Sbjct: 340 KWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWN 399 Query: 1491 ALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNTALMSCQRLGFWERSLQILWQMEA 1670 ALLGAL + NRY DA+ LF +KR+K LN H+YNT LMSC +LG WER++QILW+ME Sbjct: 400 ALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTILMSCSKLGLWERAVQILWEMEV 458 Query: 1671 SGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLWSE 1850 SGL +S SYN+V++ACE ARKP++ALQVYE+MVH+K TPDTFT+LSLIR C+WGSLW E Sbjct: 459 SGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDE 518 Query: 1851 LQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLKSN 2030 ++ +LN DVS+YN I GMCLRG++ A+K+Y KMRE G++PDGKTRALM+QNL + Sbjct: 519 VELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKD 578 Query: 2031 SSRQKSRYPS 2060 +R+K+R+ S Sbjct: 579 PARRKNRWAS 588 Score = 79.0 bits (193), Expect = 6e-12 Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 3/274 (1%) Frame = +3 Query: 756 QRILGLS-RSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMKK 932 Q I+G S + K AL + + M GLQPN+ + + A ++ MK Sbjct: 329 QAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKS 388 Query: 933 EVTSG--HTYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNW 1106 S +T++ +L A+ Y A+ LF ++ E + + YNT+L CSK W Sbjct: 389 MGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQ--LNIHIYNTILMSCSKLGLW 446 Query: 1107 LQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAM 1286 +A ++ +++ +G +T +Y +++ + E+A Y MV K P ++ Sbjct: 447 ERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSL 506 Query: 1287 ISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGH 1466 I C WG + + +L P++ YN +I + G+ +LA ++ M+ +G Sbjct: 507 IRCCI----WGSLWDEVELLLNKSA-PDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGI 561 Query: 1467 TPDAYTWNALLGALNRGNRYMDALWLFGSIKRKK 1568 PD T +L L + W G KR++ Sbjct: 562 QPDGKTRALMLQNLPKDPARRKNRWASGFKKRQR 595