BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016184
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              217   4e-54
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   217   4e-54
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   215   1e-53
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   214   3e-53

>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  218 bits (555), Expect = 2e-54
 Identities = 111/211 (52%), Positives = 139/211 (65%)
 Frame = +2

Query: 47  GGCLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEH 226
           G CLS+F+D GS ESHRYYL+RRT LEML+DRGY VP +++D+SLQ FR  YGQ+P++E 
Sbjct: 5   GRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIEL 64

Query: 227 IRISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQ 406
           ++ S    SD SK++LVIFCG  VVK+ M+R I  QI                IT QA +
Sbjct: 65  LKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMK 124

Query: 407 ALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDA 586
           AL + + K E FQITDLLVNI KH L P                YS+ E Q+PR+L+ DA
Sbjct: 125 ALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDA 184

Query: 587 VARYYGLEKGQVVKVTSDDDVAESHATYRCV 679
           ++RYYGLE+GQVVKVT D D+  SH TYRCV
Sbjct: 185 ISRYYGLERGQVVKVTYDGDITGSHVTYRCV 215


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  217 bits (552), Expect = 4e-54
 Identities = 112/209 (53%), Positives = 137/209 (65%)
 Frame = +2

Query: 53  CLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHIR 232
           CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 233 ISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQAL 412
           IS  L SD SKKILVIFCG +VVK+  +R+I  QI                IT+QA +A+
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240

Query: 413 AICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDAVA 592
            +   + E FQITDLLVNI KH L P                YS+ E Q+PRML+ DA+A
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300

Query: 593 RYYGLEKGQVVKVTSDDDVAESHATYRCV 679
           RYYGLEKGQVVKV  + ++  SH TYRCV
Sbjct: 301 RYYGLEKGQVVKVIYNGEITGSHVTYRCV 329


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  217 bits (552), Expect = 4e-54
 Identities = 112/209 (53%), Positives = 137/209 (65%)
 Frame = +2

Query: 53  CLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHIR 232
           CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 20  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 233 ISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQAL 412
           IS  L SD SKKILVIFCG +VVK+  +R+I  QI                IT+QA +A+
Sbjct: 80  ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139

Query: 413 AICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDAVA 592
            +   + E FQITDLLVNI KH L P                YS+ E Q+PRML+ DA+A
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199

Query: 593 RYYGLEKGQVVKVTSDDDVAESHATYRCV 679
           RYYGLEKGQVVKV  + ++  SH TYRCV
Sbjct: 200 RYYGLEKGQVVKVIYNGEITGSHVTYRCV 228


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  215 bits (548), Expect = 1e-53
 Identities = 110/210 (52%), Positives = 138/210 (65%)
 Frame = +2

Query: 50  GCLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHI 229
           GCLS F+D GSVESHRYYL+RRTTLEML+DRGY +P  ++DLSL  FR  +GQ P+ + +
Sbjct: 27  GCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRL 86

Query: 230 RISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQA 409
           R+SL   ++SSK+ILVIFCG  VVK+  +RN   QI                IT+QA +A
Sbjct: 87  RLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKA 146

Query: 410 LAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDAV 589
           + +   K E FQITDLLVNI KH L P                Y++ E Q+PRML+TDA+
Sbjct: 147 VNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAI 206

Query: 590 ARYYGLEKGQVVKVTSDDDVAESHATYRCV 679
           ARYYGLE+GQVVKVT   +V + H TYRCV
Sbjct: 207 ARYYGLERGQVVKVTYSGEVTQMHVTYRCV 236


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  214 bits (544), Expect = 3e-53
 Identities = 108/214 (50%), Positives = 140/214 (65%)
 Frame = +2

Query: 38  MEQGGCLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPN 217
           +E G CLS++ID G+ ESHRY+L+RRT +EML+DRGY +   ++D SLQ FR T+GQ P+
Sbjct: 13  VEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPD 72

Query: 218 LEHIRISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQ 397
           ++ +++S    SD SK++LV+FCGT  VK+  +RNI  QIA              +IT Q
Sbjct: 73  VDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQ 132

Query: 398 ARQALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLE 577
           A +A+ +   K E FQITDLLVNI KH L P                YS+ E Q+PRML 
Sbjct: 133 AMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLR 192

Query: 578 TDAVARYYGLEKGQVVKVTSDDDVAESHATYRCV 679
           TDA+ARYYGLEKGQVVKVT D D+  +H TYRCV
Sbjct: 193 TDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCV 226