BLASTX nr result

ID: Coptis25_contig00016172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016172
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270142.1| PREDICTED: uncharacterized protein At5g39865...   151   4e-34
ref|XP_003554133.1| PREDICTED: uncharacterized protein At5g39865...   150   8e-34
ref|XP_002529166.1| electron transporter, putative [Ricinus comm...   148   2e-33
ref|XP_002308899.1| hypothetical protein POPTRDRAFT_416706 [Popu...   148   2e-33
ref|XP_003632735.1| PREDICTED: uncharacterized protein At5g39865...   148   2e-33

>ref|XP_002270142.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
            gi|452114382|gb|AGG09348.1| glutaredoxin [Vitis vinifera]
          Length = 268

 Score =  151 bits (381), Expect = 4e-34
 Identities = 65/100 (65%), Positives = 82/100 (82%)
 Frame = -1

Query: 1197 LQTALDKSSVSLPQVFIKGGYLGGVEEVKQLHEDGELAKLVQDFPVQDPGFVCGNCGDAR 1018
            LQ  L + +VSLPQVFI+G Y+GG + VKQL+E GELAK+++ FPV+ PG+VC +CGD R
Sbjct: 169  LQCVLGEKNVSLPQVFIRGKYMGGADVVKQLYETGELAKILEGFPVRAPGYVCESCGDVR 228

Query: 1017 FVPCSSCSGSRKVFVEEDGQLTRCLDCNENGLLRCPSCCS 898
            F+PC  CSGSRKVF E++G L RCL+CNENGL+RCP CCS
Sbjct: 229  FIPCMDCSGSRKVFDEDEGLLKRCLECNENGLIRCPDCCS 268


>ref|XP_003554133.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 424

 Score =  150 bits (378), Expect = 8e-34
 Identities = 65/99 (65%), Positives = 80/99 (80%)
 Frame = -1

Query: 1197 LQTALDKSSVSLPQVFIKGGYLGGVEEVKQLHEDGELAKLVQDFPVQDPGFVCGNCGDAR 1018
            L+ AL   +V+LPQVFI+G Y+G  E++K L+E GELA+L++ FP QDPGFVC NCGDAR
Sbjct: 325  LKDALGGKAVTLPQVFIRGRYVGNAEQMKHLNESGELARLLEGFPTQDPGFVCDNCGDAR 384

Query: 1017 FVPCSSCSGSRKVFVEEDGQLTRCLDCNENGLLRCPSCC 901
            FVPC +C+GSRKVF  E+G L RC DCNENGL+RCP CC
Sbjct: 385  FVPCPNCNGSRKVFEHEEGGLRRCPDCNENGLIRCPGCC 423


>ref|XP_002529166.1| electron transporter, putative [Ricinus communis]
            gi|223531390|gb|EEF33225.1| electron transporter,
            putative [Ricinus communis]
          Length = 424

 Score =  148 bits (374), Expect = 2e-33
 Identities = 66/100 (66%), Positives = 82/100 (82%)
 Frame = -1

Query: 1197 LQTALDKSSVSLPQVFIKGGYLGGVEEVKQLHEDGELAKLVQDFPVQDPGFVCGNCGDAR 1018
            LQ+ L   ++ LPQVFI+G ++GGVEE++QL+E GELAKL++ FPV+DP  VC NCGDAR
Sbjct: 322  LQSMLKGKAMCLPQVFIRGEHIGGVEEIRQLNEAGELAKLLEGFPVRDPRLVCENCGDAR 381

Query: 1017 FVPCSSCSGSRKVFVEEDGQLTRCLDCNENGLLRCPSCCS 898
            FVPC +C+GSRKVF  E  +L RCLDCNENGL+RCP CCS
Sbjct: 382  FVPCPNCNGSRKVFDVEQEKLRRCLDCNENGLIRCPGCCS 421


>ref|XP_002308899.1| hypothetical protein POPTRDRAFT_416706 [Populus trichocarpa]
            gi|222854875|gb|EEE92422.1| hypothetical protein
            POPTRDRAFT_416706 [Populus trichocarpa]
          Length = 373

 Score =  148 bits (374), Expect = 2e-33
 Identities = 65/99 (65%), Positives = 80/99 (80%)
 Frame = -1

Query: 1197 LQTALDKSSVSLPQVFIKGGYLGGVEEVKQLHEDGELAKLVQDFPVQDPGFVCGNCGDAR 1018
            LQ+ L   ++ LPQVF++G ++GGVEE++QL+E GELAKL + FPVQDP  VC  CGDAR
Sbjct: 275  LQSLLKGKAMILPQVFVRGNHIGGVEEIRQLNEAGELAKLFEGFPVQDPRLVCEGCGDAR 334

Query: 1017 FVPCSSCSGSRKVFVEEDGQLTRCLDCNENGLLRCPSCC 901
            FVPC +C+GSRKVF EE+ QL RC DCNENGL+RCP CC
Sbjct: 335  FVPCPNCNGSRKVFDEEEEQLRRCADCNENGLIRCPGCC 373


>ref|XP_003632735.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 393

 Score =  148 bits (374), Expect = 2e-33
 Identities = 65/100 (65%), Positives = 79/100 (79%)
 Frame = -1

Query: 1197 LQTALDKSSVSLPQVFIKGGYLGGVEEVKQLHEDGELAKLVQDFPVQDPGFVCGNCGDAR 1018
            LQ       VSLPQVFI+G Y+GG EE+KQL+E GEL K ++ FPV++ GFVC +CGDAR
Sbjct: 294  LQNVFGGKVVSLPQVFIRGKYIGGAEEIKQLNEVGELGKYLEGFPVRETGFVCESCGDAR 353

Query: 1017 FVPCSSCSGSRKVFVEEDGQLTRCLDCNENGLLRCPSCCS 898
            FVPC +C+GSRK+F EEDGQ  RC +CNENGL+RCP CCS
Sbjct: 354  FVPCPNCNGSRKIFEEEDGQQRRCPECNENGLIRCPGCCS 393


Top