BLASTX nr result

ID: Coptis25_contig00016163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016163
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   184   1e-44
emb|CBI29079.3| unnamed protein product [Vitis vinifera]              179   2e-43
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  179   4e-43
ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   166   2e-39

>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  184 bits (466), Expect = 1e-44
 Identities = 102/188 (54%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
 Frame = -3

Query: 562  QAQRVLPEASSTSIDSTAQTGNANTADWQEEAYQKIKAMKDTYFPDLTEMYQKVCAKLQQ 383
            Q+QR LPEASSTS+DSTAQTG  N  DWQEE YQKIK MK+ Y PDL EM+QK+ AKLQQ
Sbjct: 858  QSQRALPEASSTSLDSTAQTGTINVGDWQEEVYQKIKRMKEMYLPDLNEMHQKIAAKLQQ 917

Query: 382  QEVL-TQPK-EQIEKLKSLKLYLERMLHFLQVAKNNIPAGYKEKLGSYEKQIVQFLNSHR 209
             + L  QPK EQ+EKLK  K  LERM+  LQ++KN+I   +KEKL  YEKQIV F+N+HR
Sbjct: 918  HDSLPQQPKTEQLEKLKIFKAMLERMITVLQLSKNSITPNFKEKLIGYEKQIVSFINTHR 977

Query: 208  GKKPIPSHQGQQQLQTSGGHTLSMXXXXXXXXXXXXXXXHENHMNPQMQPMNIPNSGTSV 29
             +KP+P     Q  Q+S  H  SM               HEN MNPQ+QPMN+  S  ++
Sbjct: 978  PRKPVPP---LQHGQSSVSHMHSMQQPQQSQSQLSQGQPHENQMNPQLQPMNLQGSVATM 1034

Query: 28   QPGAVTSM 5
            Q   V S+
Sbjct: 1035 QQNNVPSL 1042


>emb|CBI29079.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  179 bits (455), Expect = 2e-43
 Identities = 102/188 (54%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
 Frame = -3

Query: 562 QAQRVLPEASSTSIDSTAQTGNANTADWQEEAYQKIKAMKDTYFPDLTEMYQKVCAKLQQ 383
           Q+QR LPEASSTS+DSTAQTG  N  DWQEE YQKIK MK+ Y PDL EM+QK+ AKLQQ
Sbjct: 26  QSQRALPEASSTSLDSTAQTGTINVGDWQEEVYQKIKRMKEMYLPDLNEMHQKIAAKLQQ 85

Query: 382 QEVL-TQPK-EQIEKLKSLKLYLERMLHFLQVAKNNIPAGYKEKLGSYEKQIVQFLNSHR 209
            + L  QPK EQ+EKLK  K  LERM+  LQ++KN+I   +KEKL  YEKQIV F+N+HR
Sbjct: 86  HDSLPQQPKTEQLEKLKIFKAMLERMITVLQLSKNSITPNFKEKLIGYEKQIVSFINTHR 145

Query: 208 GKKPIPSHQGQQQLQTSGGHTLSMXXXXXXXXXXXXXXXHENHMNPQMQPMNIPNSGTSV 29
            +KP+P     Q  Q+S  H  SM               HEN MNPQ+QPMN+  S  ++
Sbjct: 146 PRKPVPP---LQHGQSSVSHMHSM-------QQPHQGQPHENQMNPQLQPMNLQGSVATM 195

Query: 28  QPGAVTSM 5
           Q   V S+
Sbjct: 196 QQNNVPSL 203


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  179 bits (453), Expect = 4e-43
 Identities = 98/188 (52%), Positives = 127/188 (67%), Gaps = 2/188 (1%)
 Frame = -3

Query: 562  QAQRVLPEASSTSIDSTAQTGNANTADWQEEAYQKIKAMKDTYFPDLTEMYQKVCAKLQQ 383
            Q QR LPE SSTS+DST QTG AN  DWQEE YQKIK+MK+ Y P+L EMYQK+ AKLQQ
Sbjct: 588  QPQRALPETSSTSLDSTHQTGQANGVDWQEEVYQKIKSMKEMYLPELNEMYQKIAAKLQQ 647

Query: 382  QEVL-TQPK-EQIEKLKSLKLYLERMLHFLQVAKNNIPAGYKEKLGSYEKQIVQFLNSHR 209
             + L  QPK +Q+EKLK  K  LER++ FLQV+K+NI   +KEKLGSYEKQIV F++++R
Sbjct: 648  HDSLPQQPKSDQLEKLKIFKTMLERIISFLQVSKSNILPSFKEKLGSYEKQIVNFISTNR 707

Query: 208  GKKPIPSHQGQQQLQTSGGHTLSMXXXXXXXXXXXXXXXHENHMNPQMQPMNIPNSGTSV 29
             +KP+ S Q Q QL  +  H++                 H+N MN Q+Q MN+  S  ++
Sbjct: 708  PRKPVSSMQQQGQLPPTHMHSMQQ-----QQSQISQGQPHDNQMNSQIQSMNLAGSMVTM 762

Query: 28   QPGAVTSM 5
            QP  VT++
Sbjct: 763  QPNNVTNV 770


>ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1|
           predicted protein [Populus trichocarpa]
          Length = 1204

 Score =  171 bits (432), Expect = 1e-40
 Identities = 98/188 (52%), Positives = 123/188 (65%), Gaps = 2/188 (1%)
 Frame = -3

Query: 562 QAQRVLPEASSTSIDSTAQTGNANTADWQEEAYQKIKAMKDTYFPDLTEMYQKVCAKLQQ 383
           Q QR LPE SSTS+DSTA+TG+AN ADWQEE YQKIK MK+TY P++ EMYQ++  KLQQ
Sbjct: 413 QPQRALPETSSTSLDSTAETGHANGADWQEEIYQKIKVMKETYLPEINEMYQRIATKLQQ 472

Query: 382 QEVL-TQPK-EQIEKLKSLKLYLERMLHFLQVAKNNIPAGYKEKLGSYEKQIVQFLNSHR 209
            + L  QPK EQ+EKLK  K+ LER++ FLQV KNNI   +KEKLGSYEKQI+ FLN  R
Sbjct: 473 HDPLPQQPKSEQLEKLKLFKVMLERLIGFLQVPKNNITPNFKEKLGSYEKQILGFLNPSR 532

Query: 208 GKKPIPSHQGQQQLQTSGGHTLSMXXXXXXXXXXXXXXXHENHMNPQMQPMNIPNSGTSV 29
            +KPIP+    QQ Q    H   M               HEN +N Q+Q +N+  S   +
Sbjct: 533 YRKPIPN---LQQGQLPQPHIQPM---QQPQSQVPQLQSHENQLNSQLQSINMQGSVPKM 586

Query: 28  QPGAVTSM 5
           Q   ++S+
Sbjct: 587 QQNNMSSL 594


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  166 bits (420), Expect = 2e-39
 Identities = 93/188 (49%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
 Frame = -3

Query: 562  QAQRVLPEASSTSIDSTAQTGNANTADWQEEAYQKIKAMKDTYFPDLTEMYQKVCAKLQQ 383
            Q+QR LPE SSTS+DSTAQTG+AN  D QEE YQKIKAMK+ YFP+L EMY K+  KLQQ
Sbjct: 581  QSQRPLPETSSTSLDSTAQTGHANAVDVQEEVYQKIKAMKEMYFPELNEMYHKIATKLQQ 640

Query: 382  QEVLTQP--KEQIEKLKSLKLYLERMLHFLQVAKNNIPAGYKEKLGSYEKQIVQFLNSHR 209
             + L QP   EQ+EKL+  K  LER++ FLQV K+++   ++EKLGSYEKQI+ F+N++R
Sbjct: 641  HDSLPQPPKTEQLEKLRLFKSMLERIITFLQVPKSSVMPSFREKLGSYEKQIINFINTNR 700

Query: 208  GKKPIPSHQGQQQLQTSGGHTLSMXXXXXXXXXXXXXXXHENHMNPQMQPMNIPNSGTSV 29
             K+ I S Q  Q         LS                HE+ MNPQMQ MN+  S  ++
Sbjct: 701  PKRQITSMQQGQ---------LSQPQIQQPQSQVPQVQSHESQMNPQMQSMNMQGSVQTM 751

Query: 28   QPGAVTSM 5
            Q   ++S+
Sbjct: 752  QQNNMSSL 759


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