BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016144
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   135   1e-32
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   135   1e-32
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   135   2e-31
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   135   7e-31
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   135   7e-31

>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  135 bits (341), Expect(2) = 1e-32
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -1

Query: 293 KSSLAYQRLTWDALRKTINGLVNKVNATNIKNIVPELIQENLIRGRGLFCRSIIKSQLAS 114
           KSS+ YQRLTWDALRK+INGLVNKVNATNIKNI+PEL  ENLIRGRGLFCRS +KSQ+AS
Sbjct: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300

Query: 113 PRFTHVFSALVSVLNTKFPQ 54
           P FT VF+ALV+V+NTKFP+
Sbjct: 301 PGFTDVFAALVAVVNTKFPE 320



 Score = 28.9 bits (63), Expect(2) = 1e-32
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 415 RRKQQHNNNNKEVGRGVNKSRTASLGVYIPPFKLRKQDNNVNRVSPI 275
           R+++Q  NN       + KS     GVYIPPFKL +    V   S I
Sbjct: 202 RQEKQTENNLNPDSSNLGKSG----GVYIPPFKLARMMKEVQDKSSI 244


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  135 bits (341), Expect(2) = 1e-32
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -1

Query: 293 KSSLAYQRLTWDALRKTINGLVNKVNATNIKNIVPELIQENLIRGRGLFCRSIIKSQLAS 114
           KSS+ YQRLTWDALRK+INGLVNKVNATNIKNI+PEL  ENLIRGRGLFCRS +KSQ+AS
Sbjct: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300

Query: 113 PRFTHVFSALVSVLNTKFPQ 54
           P FT VF+ALV+V+NTKFP+
Sbjct: 301 PGFTDVFAALVAVVNTKFPE 320



 Score = 28.9 bits (63), Expect(2) = 1e-32
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 415 RRKQQHNNNNKEVGRGVNKSRTASLGVYIPPFKLRKQDNNVNRVSPI 275
           R+++Q  NN       + KS     GVYIPPFKL +    V   S I
Sbjct: 202 RQEKQTENNLNPDSSNLGKSG----GVYIPPFKLARMMKEVQDKSSI 244


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  135 bits (340), Expect(2) = 2e-31
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -1

Query: 293 KSSLAYQRLTWDALRKTINGLVNKVNATNIKNIVPELIQENLIRGRGLFCRSIIKSQLAS 114
           KSS+ YQRLTWDALRK+INGLVNKVNATNIKNI+PEL  ENLIRGRGLFCRS +KSQ+AS
Sbjct: 224 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFGENLIRGRGLFCRSCMKSQMAS 283

Query: 113 PRFTHVFSALVSVLNTKFPQ 54
           P FT VF+ALV+V+NTKFP+
Sbjct: 284 PGFTDVFAALVAVVNTKFPE 303



 Score = 25.4 bits (54), Expect(2) = 2e-31
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 340 GVYIPPFKLRKQDNNVNRVSPI 275
           GVYIPPFKL +    V   S I
Sbjct: 206 GVYIPPFKLAQMMKEVQDKSSI 227


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  135 bits (340), Expect(2) = 7e-31
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -1

Query: 293 KSSLAYQRLTWDALRKTINGLVNKVNATNIKNIVPELIQENLIRGRGLFCRSIIKSQLAS 114
           KSS+ YQRLTWDALRK+INGLVNKVNATNIKNI+PEL  ENLIRGRGLFCRS +KSQ+AS
Sbjct: 320 KSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 379

Query: 113 PRFTHVFSALVSVLNTKFPQ 54
           P FT VF+ALV+V+NTKFP+
Sbjct: 380 PGFTDVFAALVAVVNTKFPE 399



 Score = 23.5 bits (49), Expect(2) = 7e-31
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 340 GVYIPPFKLRKQDNNVNRVSPI 275
           GVYIPPFK+      V   S +
Sbjct: 302 GVYIPPFKMAMMMKEVQDKSSV 323


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  135 bits (340), Expect(2) = 7e-31
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -1

Query: 293 KSSLAYQRLTWDALRKTINGLVNKVNATNIKNIVPELIQENLIRGRGLFCRSIIKSQLAS 114
           KSS+ YQRLTWDALRK+INGLVNKVNATNIKNI+PEL  ENLIRGRGLFCRS +KSQ+AS
Sbjct: 304 KSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 363

Query: 113 PRFTHVFSALVSVLNTKFPQ 54
           P FT VF+ALV+V+NTKFP+
Sbjct: 364 PGFTDVFAALVAVVNTKFPE 383



 Score = 23.5 bits (49), Expect(2) = 7e-31
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 340 GVYIPPFKLRKQDNNVNRVSPI 275
           GVYIPPFK+      V   S +
Sbjct: 286 GVYIPPFKMAMMMKEVQDKSSV 307