BLASTX nr result
ID: Coptis25_contig00016143
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016143 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 161 4e-38 ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 161 4e-38 ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 161 6e-38 ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 161 6e-38 ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] g... 157 8e-37 >ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] Length = 860 Score = 161 bits (408), Expect = 4e-38 Identities = 82/106 (77%), Positives = 92/106 (86%), Gaps = 5/106 (4%) Frame = -3 Query: 303 QLKRAYKRNDKPQLLAVTDFIAQLVNHE-----VALELLTILLDDPSEDSVEVAVRFVTR 139 QLKRAYKRNDKPQLLA FIA LVN + +ALELLT+LL+ P++DSVEVAV FVT Sbjct: 395 QLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTE 454 Query: 138 CGSLLQDLSPKALHGIFERFRGILHEGQINKRVQFLIEGLFALRKA 1 CGS+LQDLSPK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RKA Sbjct: 455 CGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKA 500 >ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] Length = 871 Score = 161 bits (408), Expect = 4e-38 Identities = 82/106 (77%), Positives = 92/106 (86%), Gaps = 5/106 (4%) Frame = -3 Query: 303 QLKRAYKRNDKPQLLAVTDFIAQLVNHE-----VALELLTILLDDPSEDSVEVAVRFVTR 139 QLKRAYKRNDKPQLLA FIA LVN + +ALELLT+LL+ P++DSVEVAV FVT Sbjct: 411 QLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTE 470 Query: 138 CGSLLQDLSPKALHGIFERFRGILHEGQINKRVQFLIEGLFALRKA 1 CGS+LQDLSPK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RKA Sbjct: 471 CGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKA 516 >ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog, partial [Cucumis sativus] Length = 780 Score = 161 bits (407), Expect = 6e-38 Identities = 82/106 (77%), Positives = 93/106 (87%), Gaps = 5/106 (4%) Frame = -3 Query: 303 QLKRAYKRNDKPQLLAVTDFIAQLVNHEVA-----LELLTILLDDPSEDSVEVAVRFVTR 139 QLKRAYKRNDKPQLLA FIA LVN +VA LELLT+LL++P++DSVEVAV FVT Sbjct: 332 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTE 391 Query: 138 CGSLLQDLSPKALHGIFERFRGILHEGQINKRVQFLIEGLFALRKA 1 CGS+L+DLSPK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RKA Sbjct: 392 CGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKA 437 >ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus] Length = 797 Score = 161 bits (407), Expect = 6e-38 Identities = 82/106 (77%), Positives = 93/106 (87%), Gaps = 5/106 (4%) Frame = -3 Query: 303 QLKRAYKRNDKPQLLAVTDFIAQLVNHEVA-----LELLTILLDDPSEDSVEVAVRFVTR 139 QLKRAYKRNDKPQLLA FIA LVN +VA LELLT+LL++P++DSVEVAV FVT Sbjct: 332 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTE 391 Query: 138 CGSLLQDLSPKALHGIFERFRGILHEGQINKRVQFLIEGLFALRKA 1 CGS+L+DLSPK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RKA Sbjct: 392 CGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKA 437 >ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] gi|77554176|gb|ABA96972.1| Pre-mRNA splicing factor cwc22, putative, expressed [Oryza sativa Japonica Group] gi|113649014|dbj|BAF29526.1| Os12g0256300 [Oryza sativa Japonica Group] gi|156622336|emb|CAO82941.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica Group] gi|215707245|dbj|BAG93705.1| unnamed protein product [Oryza sativa Japonica Group] Length = 787 Score = 157 bits (397), Expect = 8e-37 Identities = 82/106 (77%), Positives = 93/106 (87%), Gaps = 5/106 (4%) Frame = -3 Query: 303 QLKRAYKRNDKPQLLAVTDFIAQLVN----HE-VALELLTILLDDPSEDSVEVAVRFVTR 139 QLKRAYKRNDKPQLLA T FIA LVN HE VALELLT+LL++P++DSVEVAV FV Sbjct: 333 QLKRAYKRNDKPQLLAATKFIAHLVNQVVAHELVALELLTVLLENPTDDSVEVAVGFVKE 392 Query: 138 CGSLLQDLSPKALHGIFERFRGILHEGQINKRVQFLIEGLFALRKA 1 CG++LQDLSP+ LH IFERFRGILHEG+I+KRVQFLIEGLFA+RKA Sbjct: 393 CGAMLQDLSPQGLHAIFERFRGILHEGEIDKRVQFLIEGLFAIRKA 438