BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016138
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vit...   141   5e-32
pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofacto...   136   2e-30
ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycin...   136   2e-30
ref|NP_565699.1| tubulin-specific chaperone A [Arabidopsis thali...   136   2e-30
ref|NP_001237966.1| uncharacterized protein LOC100527822 [Glycin...   135   3e-30

>ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vitis vinifera]
           gi|147854591|emb|CAN82778.1| hypothetical protein
           VITISV_011414 [Vitis vinifera]
           gi|297734639|emb|CBI16690.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/77 (89%), Positives = 73/77 (94%)
 Frame = -1

Query: 234 MASLRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRM 55
           MA++RNLKIK  TCKRI KE HSYE+EVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATIRNLKIKTSTCKRIIKEFHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 54  MIPDCRKRLEASLADIK 4
           MIPDCRKRLEASLAD+K
Sbjct: 61  MIPDCRKRLEASLADLK 77


>pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofactor A From
           Arabidopsis Thaliana
          Length = 116

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/77 (84%), Positives = 72/77 (93%)
 Frame = -1

Query: 234 MASLRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRM 55
           MA++RNLKIK  TCKRI KELHSYE+EVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 4   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 63

Query: 54  MIPDCRKRLEASLADIK 4
           MIPDC KRLE++LAD+K
Sbjct: 64  MIPDCHKRLESALADLK 80


>ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycine max]
           gi|255629728|gb|ACU15213.1| unknown [Glycine max]
          Length = 114

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -1

Query: 228 SLRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRMMI 49
           ++R+LKIK  TCKRI KELHSYE+EVEREAAKTADMKEKGADPYDLKQQENVLAESRMMI
Sbjct: 4   TVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMI 63

Query: 48  PDCRKRLEASLADIK 4
           PDCRKRLEA+LAD+K
Sbjct: 64  PDCRKRLEAALADLK 78


>ref|NP_565699.1| tubulin-specific chaperone A [Arabidopsis thaliana]
           gi|334184582|ref|NP_001189640.1| tubulin-specific
           chaperone A [Arabidopsis thaliana]
           gi|21542453|sp|O04350.2|TBCA_ARATH RecName:
           Full=Tubulin-specific chaperone A; AltName:
           Full=TCP1-chaperonin cofactor A; AltName:
           Full=Tubulin-folding cofactor A; Short=CFA
           gi|20514257|gb|AAM22957.1|AF486848_1 tubulin folding
           cofactor A [Arabidopsis thaliana]
           gi|15293037|gb|AAK93629.1| putative TCP1-chaperonin
           cofactor A isolog [Arabidopsis thaliana]
           gi|20196887|gb|AAM14821.1| TCP1-chaperonin cofactor A
           isolog [Arabidopsis thaliana] gi|20198325|gb|AAB63093.2|
           TCP1-chaperonin cofactor A isolog [Arabidopsis thaliana]
           gi|20259135|gb|AAM14283.1| putative TCP1-chaperonin
           cofactor A protein [Arabidopsis thaliana]
           gi|21553949|gb|AAM63030.1| TCP1-chaperonin cofactor A
           isolog [Arabidopsis thaliana]
           gi|330253289|gb|AEC08383.1| tubulin-specific chaperone A
           [Arabidopsis thaliana] gi|330253290|gb|AEC08384.1|
           tubulin-specific chaperone A [Arabidopsis thaliana]
          Length = 113

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/77 (84%), Positives = 72/77 (93%)
 Frame = -1

Query: 234 MASLRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRM 55
           MA++RNLKIK  TCKRI KELHSYE+EVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 54  MIPDCRKRLEASLADIK 4
           MIPDC KRLE++LAD+K
Sbjct: 61  MIPDCHKRLESALADLK 77


>ref|NP_001237966.1| uncharacterized protein LOC100527822 [Glycine max]
           gi|255633306|gb|ACU17010.1| unknown [Glycine max]
          Length = 113

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/77 (85%), Positives = 73/77 (94%)
 Frame = -1

Query: 234 MASLRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRM 55
           MA++R+LKIK  TCKRI KELHSYE+EVEREAAKTADM EKGADP+DLKQQENVLAESRM
Sbjct: 1   MATVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMTEKGADPHDLKQQENVLAESRM 60

Query: 54  MIPDCRKRLEASLADIK 4
           MIPDCRKRLEA+LAD+K
Sbjct: 61  MIPDCRKRLEAALADLK 77