BLASTX nr result

ID: Coptis25_contig00016134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016134
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA45585.1| TPA: aldose 1-epimerase [Zea mays]                    110   9e-23
ref|XP_004147466.1| PREDICTED: aldose 1-epimerase-like [Cucumis ...   110   2e-22
ref|NP_001241992.1| uncharacterized protein LOC100781853 precurs...   108   5e-22
ref|XP_003561587.1| PREDICTED: aldose 1-epimerase-like [Brachypo...   107   1e-21
ref|NP_190364.1| aldose 1-epimerase [Arabidopsis thaliana] gi|47...   107   1e-21

>tpg|DAA45585.1| TPA: aldose 1-epimerase [Zea mays]
          Length = 367

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
 Frame = +1

Query: 7   PHTVGSRINELKSGYDINYVVDGPLGG--IKKVAVVHDTKSGRMLELWSDKPGLQFYSGN 180
           P   G+ I E++ GYDINYV+DG   G  ++KVAVV +  SGR++ELW+D+PGLQFY+GN
Sbjct: 250 PAAPGAHIAEVEGGYDINYVLDGETDGQGVRKVAVVSEADSGRVMELWADQPGLQFYTGN 309

Query: 181 MLKGQKGKGGAVYGPHTGLCLETQ 252
           MLKG +GKGGAVY  + G+CLETQ
Sbjct: 310 MLKGDEGKGGAVYPKYAGMCLETQ 333


>ref|XP_004147466.1| PREDICTED: aldose 1-epimerase-like [Cucumis sativus]
           gi|449520918|ref|XP_004167479.1| PREDICTED: aldose
           1-epimerase-like [Cucumis sativus]
          Length = 360

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   LEPHTVGSRINELKSGYDINYVVDGPLGG--IKKVAVVHDTKSGRMLELWSDKPGLQFYS 174
           L+P TVGSRIN+L  GYDINY +D   G   +KK AVVHD KSGRMLEL ++ PG+QFY+
Sbjct: 242 LKPRTVGSRINKLPKGYDINYALDDGTGEHKLKKAAVVHDKKSGRMLELSTNVPGVQFYT 301

Query: 175 GNMLKGQKGKGGAVYGPHTGLCLETQ 252
           GN +K  KGKGG VY  H  LCLETQ
Sbjct: 302 GNYIKDVKGKGGFVYQAHAALCLETQ 327


>ref|NP_001241992.1| uncharacterized protein LOC100781853 precursor [Glycine max]
           gi|255634520|gb|ACU17623.1| unknown [Glycine max]
          Length = 371

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
 Frame = +1

Query: 1   LEPHTVGSRINELKS--GYDINYVVDGPLGG-IKKVAVVHDTKSGRMLELWSDKPGLQFY 171
           L+P TVGSRIN+L    GYDINYV+DG  G  IK  A+V D KSGR+LEL+++ PGLQFY
Sbjct: 245 LKPQTVGSRINQLAGTKGYDINYVIDGEKGQKIKLAAIVQDKKSGRVLELFTNAPGLQFY 304

Query: 172 SGNMLKGQKGKGGAVYGPHTGLCLETQ 252
           +GN +K  KGKGG VY  H GLCLE+Q
Sbjct: 305 TGNYIKDLKGKGGYVYNAHAGLCLESQ 331


>ref|XP_003561587.1| PREDICTED: aldose 1-epimerase-like [Brachypodium distachyon]
          Length = 371

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
 Frame = +1

Query: 7   PHTVGSRINELKSGYDINYVVDGPL---GGIKKVAVVHDTKSGRMLELWSDKPGLQFYSG 177
           P   G+RI E+  GYDINYV+DG      G++KVA V + +SGR++ELW D+PG+QFY+G
Sbjct: 252 PAAPGARIAEVPGGYDINYVLDGAGLDGQGVRKVATVSEAESGRVMELWGDQPGVQFYTG 311

Query: 178 NMLKGQKGKGGAVYGPHTGLCLETQ 252
           N LKG +GKGGAVY  H G+CLETQ
Sbjct: 312 NFLKGDEGKGGAVYEKHGGMCLETQ 336


>ref|NP_190364.1| aldose 1-epimerase [Arabidopsis thaliana]
           gi|4741197|emb|CAB41863.1| aldose 1-epimerase-like
           protein [Arabidopsis thaliana]
           gi|17381242|gb|AAL36040.1| AT3g47800/T23J7_130
           [Arabidopsis thaliana] gi|28416453|gb|AAO42757.1|
           At3g47800/T23J7_130 [Arabidopsis thaliana]
           gi|110742316|dbj|BAE99082.1| aldose 1-epimerase - like
           protein [Arabidopsis thaliana]
           gi|332644809|gb|AEE78330.1| aldose 1-epimerase
           [Arabidopsis thaliana]
          Length = 358

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   LEPHTVGSRINELKSGYDINYVVDGPLGG-IKKVAVVHDTKSGRMLELWSDKPGLQFYSG 177
           LEP  +GSRI+EL  GYDINYV+DGP+G  ++K AVV +  +GR +ELW+++PG+QFY+ 
Sbjct: 241 LEPREIGSRIHELPGGYDINYVIDGPIGKHLRKTAVVTEQVTGRKMELWTNQPGVQFYTS 300

Query: 178 NMLKGQKGKGGAVYGPHTGLCLETQ 252
           NM+K   GKG AVY  + GLCLETQ
Sbjct: 301 NMMKRVVGKGKAVYEKYGGLCLETQ 325


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