BLASTX nr result

ID: Coptis25_contig00016132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016132
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280684.1| PREDICTED: uncharacterized protein LOC100259...    64   3e-17
ref|XP_002532047.1| conserved hypothetical protein [Ricinus comm...    53   7e-15
ref|XP_002310004.1| predicted protein [Populus trichocarpa] gi|2...    56   9e-15
ref|XP_003546587.1| PREDICTED: uncharacterized protein LOC100807...    57   9e-15
ref|XP_004169852.1| PREDICTED: uncharacterized LOC101215210 [Cuc...    53   6e-14

>ref|XP_002280684.1| PREDICTED: uncharacterized protein LOC100259371 [Vitis vinifera]
           gi|296082480|emb|CBI21485.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score = 63.9 bits (154), Expect(2) = 3e-17
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = -1

Query: 419 VMEGPSESQMLGLQNAFQTPGGEQAYSQRLSVGMTPKTLRLPKPG 285
           V+E PSE+QM+GLQ+AFQTPG     S RLSVGMTPKTLRLPK G
Sbjct: 167 VLEEPSETQMMGLQDAFQTPG---VSSHRLSVGMTPKTLRLPKHG 208



 Score = 49.3 bits (116), Expect(2) = 3e-17
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 204 EMLLSVRGSPLGVYKEDGMEAINEMEEG 121
           EMLLSV GSPLG+YKED MEAI+E EEG
Sbjct: 209 EMLLSVHGSPLGLYKEDNMEAIHESEEG 236


>ref|XP_002532047.1| conserved hypothetical protein [Ricinus communis]
           gi|223528290|gb|EEF30337.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score = 52.8 bits (125), Expect(2) = 7e-15
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -1

Query: 419 VMEGPSESQMLGLQNAFQTPGGEQAYSQRLSVGMTPKTLRLPKPG 285
           VMEGP +SQM    +  +TPG     SQR+S+GMTPKTLRLPKPG
Sbjct: 168 VMEGPPDSQMF--VDGLKTPG---VTSQRMSIGMTPKTLRLPKPG 207



 Score = 52.4 bits (124), Expect(2) = 7e-15
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -3

Query: 204 EMLLSVRGSPLGVYKEDGMEAINEMEEG 121
           EMLLSVRGSPLGVYKED MEAI+E EEG
Sbjct: 208 EMLLSVRGSPLGVYKEDNMEAIHESEEG 235


>ref|XP_002310004.1| predicted protein [Populus trichocarpa] gi|222852907|gb|EEE90454.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 55.8 bits (133), Expect(2) = 9e-15
 Identities = 30/47 (63%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
 Frame = -1

Query: 419 VMEGPSESQMLGLQNA--FQTPGGEQAYSQRLSVGMTPKTLRLPKPG 285
           V+EG S+ QMLG+ +    QTPG     SQRLS+GMTPKTLRLPKPG
Sbjct: 162 VLEGQSDFQMLGMHDGDGLQTPG---VSSQRLSIGMTPKTLRLPKPG 205



 Score = 48.9 bits (115), Expect(2) = 9e-15
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -3

Query: 204 EMLLSVRGSPLGVYKEDGMEAINEMEE 124
           EMLLSVRGSPLGVYKED MEAI+E +E
Sbjct: 206 EMLLSVRGSPLGVYKEDNMEAIHESDE 232


>ref|XP_003546587.1| PREDICTED: uncharacterized protein LOC100807790 [Glycine max]
          Length = 224

 Score = 57.4 bits (137), Expect(2) = 9e-15
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -1

Query: 416 MEGPSESQMLGLQNAFQTPGGEQAYSQRLSVGMTPKTLRLPKPG 285
           +E PS++Q L +Q   QTPG     SQRLSVGMTPKTLRLPKPG
Sbjct: 156 LEEPSDTQTLAVQEGLQTPG---VTSQRLSVGMTPKTLRLPKPG 196



 Score = 47.4 bits (111), Expect(2) = 9e-15
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 204 EMLLSVRGSPLGVYKEDGMEAINEMEEG 121
           EMLLSV GSPLGVYK++ MEAI+E EEG
Sbjct: 197 EMLLSVHGSPLGVYKDNNMEAIHESEEG 224


>ref|XP_004169852.1| PREDICTED: uncharacterized LOC101215210 [Cucumis sativus]
          Length = 229

 Score = 53.1 bits (126), Expect(2) = 6e-14
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = -1

Query: 419 VMEGPSESQMLGLQNAFQTPGGEQAYSQRLSVGMTPKTLRLPKPG 285
           V+E PS++ +LG+ +  QTPG     +QRLS+GMTPKT RLPKPG
Sbjct: 160 VLEEPSDNLVLGMPDIHQTPG---VSNQRLSIGMTPKTRRLPKPG 201



 Score = 48.9 bits (115), Expect(2) = 6e-14
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 204 EMLLSVRGSPLGVYKEDGMEAINEMEEG 121
           EML+S+ GSPLGVYKED MEAI+E EEG
Sbjct: 202 EMLVSIHGSPLGVYKEDNMEAIHESEEG 229


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