BLASTX nr result

ID: Coptis25_contig00016115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016115
         (1563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   279   2e-72
ref|XP_002515544.1| conserved hypothetical protein [Ricinus comm...   241   4e-61
ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|2...   241   4e-61
ref|XP_002513460.1| conserved hypothetical protein [Ricinus comm...   237   6e-60
ref|XP_002515541.1| conserved hypothetical protein [Ricinus comm...   226   1e-56

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  279 bits (713), Expect = 2e-72
 Identities = 160/374 (42%), Positives = 228/374 (60%), Gaps = 3/374 (0%)
 Frame = -1

Query: 1338 ESMAVNSIKSMLQTV-HISSEASIYKVPVLLRSVDEAAYTPRMVSFGPLHYGKEELRDME 1162
            +S+   SI   L ++  + S+  IY+VP  LR V+E A+ PR++S GP+H+GK+ LRDME
Sbjct: 21   DSLLAASINEKLSSLTSLPSQCCIYRVPDTLRRVNEEAFVPRILSIGPVHHGKKRLRDME 80

Query: 1161 AHKRQYLKDFLARSPRIKLEDCIGVLKDLEDKALDCYAQTISLNSNDFIKLMLLDACFII 982
             HK QYLK  L R P   +E  +  +++LE +   CYA+ I  +S++F+ +MLLD CFII
Sbjct: 81   GHKWQYLKALLQRKPGTMVERYVKAMRELEARTRGCYAEIIKFDSDEFVTMMLLDGCFII 140

Query: 981  ELFLKWRKRNSSGNSIDELIYNKFRMKYWMRFDLLLLENQLPFFVIEKLYDLYLSTSSDR 802
            ELFLK   +N      D+ I+N+  +   +  DL+LLENQLPFFV+E L++L  +T  + 
Sbjct: 141  ELFLK--NKNKQLRDEDDPIFNRTMVLTDLHRDLILLENQLPFFVLETLFNLIENTDQEG 198

Query: 801  DNVSLLVLTLEYFSYFGLDKKTVEGVVFKGSDSYKVNHILHLC-LQCHLPTKARVTSDGD 625
             + S+L LT  +F + GL +     V+ + S    V H+L L  L    P+  + TS   
Sbjct: 199  PSTSVLELTYVFFKFLGLQE-----VLIRDSQP-DVKHLLDLLRLWFVPPSSTKSTSKSK 252

Query: 624  AELIRSATELQNAGIKFKKGRSACLWEVKFTNGMLEIPTVTISDSTNSRFRNLIALEQ-S 448
             ELIRS TEL  AG+KF+ G  +CL E+KF NG+LEIP +TI D+T+S   NLIA EQ  
Sbjct: 253  FELIRSVTELHEAGVKFRMGTVSCLMEIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQCC 312

Query: 447  GKDEATYFTNYVLLLDCLINTSSDVALLRECGIITSFMGSDEEVSEMINKLCKGVITNQY 268
             +    Y T+YV+L++ LIN+  DVALL   GII + +G +E VS +  KL K V+ N  
Sbjct: 313  NRFTPHYITDYVILMEYLINSPKDVALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNSD 372

Query: 267  GGYYRQLCESVNAY 226
               +  LC  VN Y
Sbjct: 373  KFQFSNLCRDVNKY 386


>ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis]
            gi|223545488|gb|EEF46993.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 439

 Score =  241 bits (615), Expect = 4e-61
 Identities = 140/376 (37%), Positives = 227/376 (60%), Gaps = 6/376 (1%)
 Frame = -1

Query: 1335 SMAVNSIKSMLQTVH-ISSEASIYKVPVLLRSVDEAAYTPRMVSFGPLHYGKEELRDMEA 1159
            S+ + S+KS L+ +  +SSE  IY+VP  +R V+  AYTPR+VS GP H+GK  L+ ME 
Sbjct: 21   SLLLTSMKSRLENLSPVSSERCIYRVPKRIRDVNHNAYTPRLVSIGPFHHGKPGLKAMEE 80

Query: 1158 HKRQYLKDFLARSPRIKLEDCIGVLKDLEDKALDCYAQTISLNSNDFIKLMLLDACFIIE 979
            HK ++L++FL R  R+KL+D +  +KD E++A +CYA+TI+L S++F++++++DA F I+
Sbjct: 81   HKWRHLQNFL-RQTRVKLDDLVKFIKDREERARNCYAETIALTSDEFVQILIVDATFTID 139

Query: 978  LFLKWRKRNSSGNSIDELIYNKFRMKYWMRFDLLLLENQLPFFVIEKLYDL--YLSTSSD 805
            + L   K         E +Y++  + + +  D+LL+ENQLP+F++  + D    ++ S  
Sbjct: 140  ILL--GKVIPQLTCAIECVYDRSSLMFDIYRDMLLIENQLPYFILGDILDFAKSIAASGS 197

Query: 804  RDNVSLLVLTLEYF-SYFGLDKKTVEGVVFKGSDSYKVNHILHLCLQCHLPTKARVT--S 634
                S+L LT  YF SY  L      G         +VNH +     CH P K R T   
Sbjct: 198  SQWPSILELTRVYFNSYMQL------GRASHPMRRSEVNHFVDFLRLCHQPIKPRQTPRE 251

Query: 633  DGDAELIRSATELQNAGIKFKKGRSACLWEVKFTNGMLEIPTVTISDSTNSRFRNLIALE 454
            +   E+ RS+TEL+ AG+KFK   +  L +++F +G+LEIP + +S+ T + FRNLIA E
Sbjct: 252  NRKFEMTRSSTELREAGVKFKVASTTHLLDIQFNDGVLEIPYIRVSEITEAFFRNLIAFE 311

Query: 453  QSGKDEATYFTNYVLLLDCLINTSSDVALLRECGIITSFMGSDEEVSEMINKLCKGVITN 274
            Q      +Y ++Y++++D LINT  DV +L + GI+   + ++ E S + N L K ++ +
Sbjct: 312  QC-HCHTSYISDYIVIMDSLINTPHDVEVLVKYGIMKVMLANNVEASTLFNNLAKEILYD 370

Query: 273  QYGGYYRQLCESVNAY 226
             +  YY  LCE +N +
Sbjct: 371  SHVFYYSLLCEDLNTF 386


>ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1|
            predicted protein [Populus trichocarpa]
          Length = 410

 Score =  241 bits (615), Expect = 4e-61
 Identities = 144/356 (40%), Positives = 214/356 (60%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1290 ISSEASIYKVPVLLRSVDEAAYTPRMVSFGPLHYGKEELRDMEAHKRQYLKDFLARSPRI 1111
            +SS+  IY VP  L  ++E AYTP++VS GPLH+GK ELR ME HK++YL+DFL R+ ++
Sbjct: 11   LSSKCCIYTVPKRLHHLNEKAYTPQLVSIGPLHHGKPELRPMEEHKKRYLQDFLQRT-KL 69

Query: 1110 KLEDCIGVLKDLEDKALDCYAQTISLNSNDFIKLMLLDACFIIELFLKWRKRNSSGNSID 931
             L D + V++  E K  DCYA+TI  +S++FIK++L+DA FIIE+ L++  +       +
Sbjct: 70   SLVDYLKVIEKNEKKLRDCYAETIEFSSDEFIKMILVDAAFIIEVLLRYHFKPMRKEKEN 129

Query: 930  ELIYNKFRMKYWMRFDLLLLENQLPFFVIEKLYDLYLSTSSDRDNVSLLVLTLEY-FSYF 754
            + +YNK      +R D+ LLENQLPFF++E L+D    T     N  L +  L Y FS  
Sbjct: 130  DRVYNKPWAIQDIRKDMWLLENQLPFFILEDLFDPARITLPSGSNQMLSITKLAYEFSKD 189

Query: 753  GLDKKTVEGVVFKGSDSYKVNHILHLCLQCHLPTKARVTSDGDAELIRSATELQNAGIKF 574
              D + +E    K + S KV H++     CH P +++         I SATEL  AG+KF
Sbjct: 190  LWDLEEMEEKSQK-NKSPKVQHLVDFLWICHQPPQSKSKKKLKTLGIPSATELHQAGVKF 248

Query: 573  KKGRSACLWEVKFTNGMLEIPTVTISDSTNSRFRNLIALEQSGKDEATYFTNYVLLLDCL 394
            K G S  L+++KF NG+LEIP + I  +T   FRNL+A EQ    +  Y  +YV++++ L
Sbjct: 249  KLGSSKNLFDIKFKNGILEIPRLEIVGATELLFRNLLAFEQCHCSK-NYINDYVIIINHL 307

Query: 393  INTSSDVALLRECGIITSFMGSDEEVSEMINKLCKGVITNQYGGYYRQLCESVNAY 226
            +NT+ DV LL + GI+ +++  DE +S + + L K         Y+  L E +NAY
Sbjct: 308  VNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSGLVEELNAY 363


>ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis]
            gi|223547368|gb|EEF48863.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  237 bits (605), Expect = 6e-60
 Identities = 141/367 (38%), Positives = 221/367 (60%), Gaps = 2/367 (0%)
 Frame = -1

Query: 1320 SIKSMLQTVH-ISSEASIYKVPVLLRSVDEAAYTPRMVSFGPLHYGKEELRDMEAHKRQY 1144
            S+++ L+ +H +S +  I++VP  LR ++E AYTPR VS G LH+GK+EL+ ME HKR+Y
Sbjct: 2    SVRNELEVLHSLSDDCCIHRVPKRLRQLNEKAYTPRAVSIGALHHGKQELKAMEEHKRRY 61

Query: 1143 LKDFLARSPRIKLEDCIGVLKDLEDKALDCYAQTISLNSNDFIKLMLLDACFIIELFLKW 964
            L+DFL  S +  +EDCI ++KD E +  +CY++TI LNS +F+K++LLDA FII + LK 
Sbjct: 62   LRDFLEWS-KASVEDCIKLIKDNEIRLRNCYSETIGLNSENFVKMILLDAAFIIMVLLKQ 120

Query: 963  RKRNSSGNSIDELIYNKFRMKYWMRFDLLLLENQLPFFVIEKLYDLYLSTSSD-RDNVSL 787
              +     S  + I++K  M   +RFD+LLLENQ+PFF+++ L+ L  ST+S+  + +S+
Sbjct: 121  CLKEF--RSKKDRIFSKPGMIGDVRFDILLLENQIPFFILDDLFKL--STNSEGHEELSM 176

Query: 786  LVLTLEYFSYFGLDKKTVEGVVFKGSDSYKVNHILHLCLQCHLPTKARVTSDGDAELIRS 607
            +VLT ++F+        V   +    D  K+ H++     C  P K +        +I S
Sbjct: 177  IVLTHKFFT--DTFDSWVAKHILDEHDFSKIEHMVDFLRVCQQPPKLQNRKKLKKLIIPS 234

Query: 606  ATELQNAGIKFKKGRSACLWEVKFTNGMLEIPTVTISDSTNSRFRNLIALEQSGKDEATY 427
             TEL  AG+KF+ G S  L  +KF  G+L++P++ I D+T    RNL A EQ   D   Y
Sbjct: 235  VTELHQAGVKFELGSSRKLLNIKFNRGILKVPSLQIDDNTEILLRNLQAFEQCLCDRGNY 294

Query: 426  FTNYVLLLDCLINTSSDVALLRECGIITSFMGSDEEVSEMINKLCKGVITNQYGGYYRQL 247
             ++Y+ L+  L+    DV LL + GII +++ + E VS +  KL +  +      Y+  L
Sbjct: 295  VSDYISLVSLLVKAPKDVDLLAQNGIIENWLVNSEGVSTLFQKLEQENLLIPDDFYFSSL 354

Query: 246  CESVNAY 226
             E +N+Y
Sbjct: 355  VEELNSY 361


>ref|XP_002515541.1| conserved hypothetical protein [Ricinus communis]
            gi|223545485|gb|EEF46990.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 433

 Score =  226 bits (576), Expect = 1e-56
 Identities = 146/374 (39%), Positives = 214/374 (57%), Gaps = 7/374 (1%)
 Frame = -1

Query: 1326 VNSIKSMLQTVH--ISSEASIYKVPVLLRSVDEAAYTPRMVSFGPLHYGKEELRDMEAHK 1153
            V +I  ML+ +   +SS   IY+VP  LR V+E AYTP+++S GP H+G   L+ ME HK
Sbjct: 27   VKNISKMLEHLEPPLSSNCCIYRVPPRLRKVNEEAYTPQVISIGPFHHGDPRLQTMEKHK 86

Query: 1152 RQYLKDFLARSPRIKLEDCIGVLKDLEDKALDCYAQTISLNSNDFIKLMLLDACFIIELF 973
             +YL+ FL R+ +  L   +  +K  ED    CYA+TI L SN+F+K++L D+ FIIE F
Sbjct: 87   LRYLRKFLERT-KTSLRSFVQDIKQKEDSIRSCYAETIELGSNEFVKMILTDSTFIIEHF 145

Query: 972  LKWRKRNSSGNSIDELIYNKFRMKYW----MRFDLLLLENQLPFFVIEKLYDLYLSTSSD 805
            L    R    +  DE  +++   K W    ++ DL+LLENQLP FVI+ LY+L  S+  +
Sbjct: 146  L----RKYFPDLQDE--HDRTVCKPWRQGDIKNDLILLENQLPLFVIKDLYELAFSSFQN 199

Query: 804  RDNVSLLVLTLEYFSYFGLDKKTVEGVVFKGSDSYKVNHILHLCLQCHLPTKARVTSDGD 625
            +   S L L   +F  F    K+ +      +D  + + +L  C       K+   +D D
Sbjct: 200  KCP-SFLELAFHFFKSFNNQGKSPQEGAKHFTDMLR-SFLLPWC-------KSSEPTDDD 250

Query: 624  AEL-IRSATELQNAGIKFKKGRSACLWEVKFTNGMLEIPTVTISDSTNSRFRNLIALEQS 448
              L I SATELQ AG+KFK   + CL  ++FT+ +LEIP   I   T S  RNL+ALEQ 
Sbjct: 251  KMLYIHSATELQGAGVKFKVSSTKCLLRLQFTDQVLEIPRFRIHSRTESILRNLMALEQC 310

Query: 447  GKDEATYFTNYVLLLDCLINTSSDVALLRECGIITSFMGSDEEVSEMINKLCKGVITNQY 268
                 TY  +Y+ L+DCLINT +DV LL +  II + +G+  EV+ ++N LCK +   + 
Sbjct: 311  LYPCNTYICDYIFLMDCLINTENDVDLLIDKKIIVNGLGNSSEVATLLNNLCKHITLCEG 370

Query: 267  GGYYRQLCESVNAY 226
              +Y ++ E +N Y
Sbjct: 371  CFFYSKISEELNNY 384


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