BLASTX nr result

ID: Coptis25_contig00016107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016107
         (1754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|2...   275   3e-71
ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativu...   268   4e-69
ref|XP_002521080.1| conserved hypothetical protein [Ricinus comm...   267   8e-69
ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]        261   3e-67
ref|NP_001242722.1| uncharacterized protein LOC100791247 [Glycin...   253   1e-64

>ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|222844774|gb|EEE82321.1|
            predicted protein [Populus trichocarpa]
          Length = 280

 Score =  275 bits (703), Expect = 3e-71
 Identities = 158/289 (54%), Positives = 191/289 (66%), Gaps = 9/289 (3%)
 Frame = +3

Query: 330  DISHSLWD--SNQNEHLPYMFVDTTPIKACGDLAYSVSNS------RKNSNKEVEEYKEY 485
            D+S  LW+  +   E L YM  +TTP+KAC DLAY V++         N NKE EE +E 
Sbjct: 1    DVSQRLWNEVTLNGEDLSYMLDETTPVKACADLAYHVNHDGMVLWMSDNMNKEPEERRET 60

Query: 486  SSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKSKDKEDYMEEVSPENTQWDSGCYGDRSA 665
              Q KRRR LQF     DS  CDE+    F KS + E+ +EEV P+ +QWDSG Y D SA
Sbjct: 61   CFQFKRRR-LQFDTHLADSPFCDEDLTSVFLKSNETEESLEEVFPQASQWDSG-YQDMSA 118

Query: 666  FSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEFCNIS-EMESDSVKIC 842
                GLD SS+ W+++CF+D GM  S +DMN  G SD QIDIS+FCN   E E+ +V+ C
Sbjct: 119  SCYNGLDPSSDPWIADCFNDSGMHFSPNDMNFPGASDIQIDISDFCNDPPEFEASTVQKC 178

Query: 843  XXXXXXXXXXXKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDMTLKEINQRILSP 1022
                        +V+KG KS I TPT LA+SVAYPFA IKPCGVHGD+TL EINQRI +P
Sbjct: 179  VPRTPR-----NVVFKGTKSFIQTPTKLATSVAYPFAFIKPCGVHGDVTLNEINQRIRTP 233

Query: 1023 AQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTRG 1169
              S SK  +D++P V YP SAFSGKPVV KTKIRTEGGKGSITIMRT+G
Sbjct: 234  PPSKSK-QKDEDP-VVYPMSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 280


>ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativus]
            gi|449529551|ref|XP_004171763.1| PREDICTED: protein
            XRI1-like [Cucumis sativus]
          Length = 304

 Score =  268 bits (684), Expect = 4e-69
 Identities = 152/304 (50%), Positives = 196/304 (64%), Gaps = 5/304 (1%)
 Frame = +3

Query: 273  SELWEWRGEDYYLQKDCNLDISHSLWDS-NQNEHLPYMFVDTTPIKACGDLAYSVSNSRK 449
            ++ W W G+ Y +QKD +++IS  LWD  ++N  L Y+F +TTP+KACGDLAY V+ S  
Sbjct: 8    NDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCS-D 66

Query: 450  NSNKEVEEYKEYSSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKSKDKEDYMEEVSPENT 629
            + NK+ EE +E  SQ KRRRMLQF+    ++ +C E+    F KS +K         E +
Sbjct: 67   DRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPAALAEVS 126

Query: 630  QWDSGCYG--DRSAFS-NGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEF 800
                 C G  D    S +  LD S E W++ C +D  M  S +D++ +G SD QID+SEF
Sbjct: 127  YGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEF 186

Query: 801  CN-ISEMESDSVKICXXXXXXXXXXXKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVH 977
            C+   E +S+ V+              I++KGRKS+I TPT LASSVAYPFA IKPCG H
Sbjct: 187  CDGAPEFKSNVVQ-----HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFH 241

Query: 978  GDMTLKEINQRILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIM 1157
            GD+TLK+INQRI +P  S  K+  +D PS SYPTSAFSGKPVV KTKI TEGGKGSITIM
Sbjct: 242  GDVTLKDINQRIRTPPPSKLKHQPED-PSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300

Query: 1158 RTRG 1169
            RTRG
Sbjct: 301  RTRG 304


>ref|XP_002521080.1| conserved hypothetical protein [Ricinus communis]
            gi|223539649|gb|EEF41231.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 293

 Score =  267 bits (682), Expect = 8e-69
 Identities = 151/293 (51%), Positives = 191/293 (65%), Gaps = 13/293 (4%)
 Frame = +3

Query: 330  DISHSLWD--SNQNEHLPYMFVDTTPIKACGDLAYSVSNSRKNSNKEVEEYKEYSSQVKR 503
            D+S  LW+  +   E L YM  +TTP+KACGDLAY V++S  N +KE EE++E SSQ+KR
Sbjct: 8    DVSECLWNEVTLNEEDLSYMLDETTPVKACGDLAYHVNHS-DNMHKEPEEHRETSSQLKR 66

Query: 504  RRMLQFSPLSTDSLLCDENTQFAFEKS-----------KDKEDYMEEVSPENTQWDSGCY 650
            RRMLQF   + DS LC E     F +S           +++ED +EEV P+ + W  G  
Sbjct: 67   RRMLQFDTQAADSPLCHEEISSVFLQSNATVNVFVTYVQEREDSLEEVLPQASDWVPGFS 126

Query: 651  GDRSAFSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEFCNISEMESDS 830
             D SA S   LD SSE WL++CF+D  M LS +DMN  G  D QIDISEFCN   + +++
Sbjct: 127  ADVSASSYEALDHSSEGWLADCFNDTEMGLSPNDMNFPGACDVQIDISEFCN-GPLGNEA 185

Query: 831  VKICXXXXXXXXXXXKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDMTLKEINQR 1010
              +             +++KG+KS I TPT LASSV YPFA IKPCG HGD+TLK+INQ+
Sbjct: 186  HAV---QKRITRTPRNVIFKGKKSFIRTPTKLASSVVYPFAFIKPCGFHGDVTLKDINQK 242

Query: 1011 ILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTRG 1169
            I +P  S  K + +D    +YPTSAFSGKPVV KTKIRTEGGKGSITIMRT+G
Sbjct: 243  IRTPPPSKLKQNEED--PAAYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 293


>ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]
          Length = 302

 Score =  261 bits (668), Expect = 3e-67
 Identities = 147/301 (48%), Positives = 190/301 (63%), Gaps = 3/301 (0%)
 Frame = +3

Query: 276  ELWEWRGEDYYLQKDCNLDISHSLWDS-NQNEHLPYMFVD-TTPIKACGDLAYSVSNSRK 449
            E W+W  EDY LQ+  N +IS  +W+  +QNE L ++F D TTP+KACGD AY+V+NS  
Sbjct: 9    EPWDWHREDYCLQRSFNYEISPGIWNGVSQNEDLSFVFNDETTPVKACGDFAYNVNNSES 68

Query: 450  NS-NKEVEEYKEYSSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKSKDKEDYMEEVSPEN 626
            N+  KE ++  + S Q+KRRRMLQF+      LL +E    A+ K K  E+  E+V PE 
Sbjct: 69   NNVQKESDKCLKSSYQIKRRRMLQFNSQDGGHLLSNEQMSSAYLKGK--EEPKEDVFPEF 126

Query: 627  TQWDSGCYGDRSAFSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEFCN 806
            +QW SG  G  SA +   L+ S+E WL++CF D  MQL  DD+N SG  + Q+D+++  N
Sbjct: 127  SQWVSGTPGSASASNYEDLE-SAEGWLADCFKDAEMQLCPDDLNFSGADEVQVDVADLGN 185

Query: 807  ISEMESDSVKICXXXXXXXXXXXKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDM 986
                   +V               I++KG KS I TPT LA+SVAYPFA IKPCG HGD+
Sbjct: 186  FPPACEQNV----VQHGFTQTPKNIIFKGGKSFIETPTKLAASVAYPFAFIKPCGAHGDV 241

Query: 987  TLKEINQRILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTR 1166
            TLKEINQRILSP   +    +      +YP SAFSGKPVV KT+I  EGGKGSITIMRT+
Sbjct: 242  TLKEINQRILSPPPPLKSQQQSMEDPSAYPKSAFSGKPVVGKTRIHIEGGKGSITIMRTK 301

Query: 1167 G 1169
            G
Sbjct: 302  G 302


>ref|NP_001242722.1| uncharacterized protein LOC100791247 [Glycine max]
            gi|255647285|gb|ACU24109.1| unknown [Glycine max]
          Length = 298

 Score =  253 bits (645), Expect = 1e-64
 Identities = 146/300 (48%), Positives = 186/300 (62%), Gaps = 2/300 (0%)
 Frame = +3

Query: 276  ELWEWRGEDYYLQKDCNLDISHSLWDS-NQNEHLPYMFVD-TTPIKACGDLAYSVSNSRK 449
            E W+W  EDY LQ+  + + S  LW+   QNE L  +F D TTP+KACGD AY+V+NS  
Sbjct: 9    EPWDWHREDYCLQRSFDYENSQGLWNGVPQNEDLSNVFNDETTPVKACGDFAYNVNNSEL 68

Query: 450  NSNKEVEEYKEYSSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKSKDKEDYMEEVSPENT 629
               KE ++  + S Q+KRRRMLQF+       L +E+   A+ K K++ +  E+V PE +
Sbjct: 69   Q--KESDKCLKSSDQIKRRRMLQFNTQDGGHFLSNEHMSSAYLKGKEESN--EDVFPELS 124

Query: 630  QWDSGCYGDRSAFSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEFCNI 809
             W SG  G  SA +   L+ S+E WL++CF D  MQL  DD+N SG    QID+++ CN 
Sbjct: 125  HWVSGASGSASASNYEDLE-SAEGWLADCFKDAEMQLCPDDLNFSGADAVQIDVADLCNF 183

Query: 810  SEMESDSVKICXXXXXXXXXXXKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDMT 989
                  +V               IV+KG KS I TPT LA+SVAYPF  IKPCG HGD+T
Sbjct: 184  PPACEQNV----LQHHVTQTPKNIVFKGGKSFIETPTKLAASVAYPFTFIKPCGAHGDVT 239

Query: 990  LKEINQRILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTRG 1169
            LKEINQRILSP   +      ++PS +YP SAFSGKPVV KTKI  EGGKGSITIM T+G
Sbjct: 240  LKEINQRILSPPPPLKSQQSMEDPS-AYPKSAFSGKPVVGKTKIHIEGGKGSITIMGTKG 298


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