BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016104
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]              79   3e-13
ref|XP_002866661.1| polyadenylate-binding protein family protein...    79   5e-13
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi...    79   5e-13
ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [S...    78   7e-13
ref|XP_002525843.1| poly-A binding protein, putative [Ricinus co...    78   9e-13

>gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
          Length = 207

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
 Frame = -3

Query: 184 NAEKLQELGEMRKRLKEMEDEAAALREMQAKVEKEMTAAFQVEIVDA---SKEEVDSRSV 14
           +A KLQEL EM+KRLKEME+EAAALREMQAKVEKEM A        A   SK+EVDSRSV
Sbjct: 32  DAVKLQELDEMKKRLKEMEEEAAALREMQAKVEKEMGAGQDPASAAANQESKQEVDSRSV 91

Query: 13  FVGN 2
           FVGN
Sbjct: 92  FVGN 95


>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312496|gb|EFH42920.1|
           polyadenylate-binding protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
 Frame = -3

Query: 190 ALNAEKLQELGEMRKRLKEMEDEAAALREMQAKVEKEMTAAFQVEIV--DASKEEVDSRS 17
           A + + ++EL EM+KRLKEMEDEAAALREMQAKVEKEM A     I    A KEEVD+RS
Sbjct: 34  AADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARS 93

Query: 16  VFVGN 2
           VFVGN
Sbjct: 94  VFVGN 98


>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
           protein II-like [Arabidopsis thaliana]
           gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|23197620|gb|AAN15337.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|332010647|gb|AED98030.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 220

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
 Frame = -3

Query: 190 ALNAEKLQELGEMRKRLKEMEDEAAALREMQAKVEKEMTAAFQVEIV--DASKEEVDSRS 17
           A + + ++EL EM+KRLKEMEDEAAALREMQAKVEKEM A     I    A KEEVD+RS
Sbjct: 34  AADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARS 93

Query: 16  VFVGN 2
           VFVGN
Sbjct: 94  VFVGN 98


>ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
           gi|241914948|gb|EER88092.1| hypothetical protein
           SORBIDRAFT_10g007620 [Sorghum bicolor]
          Length = 203

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
 Frame = -3

Query: 208 GQETHLAL--NAEKLQELGEMRKRLKEMEDEAAALREMQAKVEKEMTAAFQVEIVDASKE 35
           G++  +A   +A KLQEL EM++RLKEME+EAAALREMQAKV KEM           +KE
Sbjct: 17  GEDVDMAAGDDATKLQELDEMKRRLKEMEEEAAALREMQAKVAKEMQGVDPNATTSENKE 76

Query: 34  EVDSRSVFVGN 2
           E+DSRSVFVGN
Sbjct: 77  EMDSRSVFVGN 87


>ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
           gi|223534848|gb|EEF36537.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 198

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
 Frame = -3

Query: 187 LNAEKLQELGEMRKRLKEMEDEAAALREMQAKVEKEMTAAFQ--VEIVDASKEEVDSRSV 14
           +N E++ EL +M+KRLKEMEDEAAALREMQAKVEKEM ++         A++EEVDSRSV
Sbjct: 13  INEEEVPELDDMKKRLKEMEDEAAALREMQAKVEKEMGSSQDPTAAASQANREEVDSRSV 72

Query: 13  FVGN 2
           FVGN
Sbjct: 73  FVGN 76