BLASTX nr result

ID: Coptis25_contig00016100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016100
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...   114   7e-23
gb|EAZ15506.1| hypothetical protein OsJ_30915 [Oryza sativa Japo...   114   7e-23
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...   113   1e-22
gb|EEE50671.1| hypothetical protein OsJ_30917 [Oryza sativa Japo...   113   1e-22
gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indi...   113   1e-22

>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
           gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
           Japonica Group]
          Length = 1575

 Score =  114 bits (284), Expect = 7e-23
 Identities = 79/219 (36%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
 Frame = -2

Query: 632 NDVSTTVVPL-KDDIN-------GYDNSFPGDANISYR----GDIEGQEDVXXXXXXXXX 489
           +DV+ T+    +DDIN       G D  F  D +  Y     GD E +ED+         
Sbjct: 154 DDVAVTMETTHEDDINDECHMFAGEDMDFDDDDDDEYYMFAGGDGEDEEDIDLNEIEQD- 212

Query: 488 XXRKVPSTCRSSHNCARDYVYAPNFQQFEITH-MHTCEFCHAELFPSESRVFCCLRGKVN 312
                     S  +   D+VY+   +   +      C+ C A+ F  E+  FCC  GK+ 
Sbjct: 213 ----------SVEHDPYDHVYSNIPRNTHVLKPTANCKHCGAKKFQYETNGFCCRGGKIK 262

Query: 311 LPLLPTPPDLMYLYASHTDEAVHFRQNIRSYNHVFSFTSMGVHLDENLASGRRGIYTYRA 132
           L  L TPP+LM L++S   +A HFR NIR +N  FSFT++GV LDE   + R G+YT+RA
Sbjct: 263 LSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFSFTTLGVSLDERYTNMRSGVYTFRA 322

Query: 131 QGSIYHKIGGLLPQVGQR---PRYLQMYVYDTDHELVNR 24
            G IYH I       GQR   P +L++Y YD D  L +R
Sbjct: 323 HGQIYHNIHSF----GQRDNAPEHLELYFYDDDPSLNHR 357


>gb|EAZ15506.1| hypothetical protein OsJ_30915 [Oryza sativa Japonica Group]
          Length = 1200

 Score =  114 bits (284), Expect = 7e-23
 Identities = 79/219 (36%), Positives = 109/219 (49%), Gaps = 16/219 (7%)
 Frame = -2

Query: 632 NDVSTTVVPL-KDDIN-------GYDNSFPGDANISYR----GDIEGQEDVXXXXXXXXX 489
           +DV+ T+    +DDIN       G D  F  D +  Y     GD E +ED+         
Sbjct: 182 DDVAVTMETTHEDDINDECHMFAGEDMDFDDDDDDEYYMFAGGDGEDEEDIDLNEIEQD- 240

Query: 488 XXRKVPSTCRSSHNCARDYVYAPNFQQFEITH-MHTCEFCHAELFPSESRVFCCLRGKVN 312
                     S  +   D+VY+   +   +      C+ C A+ F  E+  FCC  GK+ 
Sbjct: 241 ----------SVEHDPYDHVYSNIPRNTHVLKPTANCKHCGAKKFQYETNGFCCRGGKIK 290

Query: 311 LPLLPTPPDLMYLYASHTDEAVHFRQNIRSYNHVFSFTSMGVHLDENLASGRRGIYTYRA 132
           L  L TPP+LM L++S   +A HFR NIR +N  FSFT++GV LDE   + R G+YT+RA
Sbjct: 291 LSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFSFTTLGVSLDERYTNMRSGVYTFRA 350

Query: 131 QGSIYHKIGGLLPQVGQR---PRYLQMYVYDTDHELVNR 24
            G IYH I       GQR   P +L++Y YD D  L +R
Sbjct: 351 HGQIYHNIHSF----GQRDNAPEHLELYFYDDDPSLNHR 385


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score =  113 bits (282), Expect = 1e-22
 Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
 Frame = -2

Query: 383 CEFCHAELFPSESRVFCCLRGKVNLPLLPTPPDLMYLYASHTDEAVHFRQNIRSYNHVFS 204
           C+ C A+ F  E+  FCC  GK+ L  L TPP+LM L++S   +A HFR NIR +N  FS
Sbjct: 80  CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 139

Query: 203 FTSMGVHLDENLASGRRGIYTYRAQGSIYHKIGGLLPQVGQR---PRYLQMYVYDTDHEL 33
           FT++GV LDE   + R G+YT+RA G IYH I       GQR   P +L++Y YD D  L
Sbjct: 140 FTTLGVSLDERYTNMRSGVYTFRAHGQIYHNIHSF----GQRDNAPEHLELYFYDDDPSL 195

Query: 32  VNR 24
            +R
Sbjct: 196 NHR 198


>gb|EEE50671.1| hypothetical protein OsJ_30917 [Oryza sativa Japonica Group]
          Length = 767

 Score =  113 bits (282), Expect = 1e-22
 Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
 Frame = -2

Query: 383 CEFCHAELFPSESRVFCCLRGKVNLPLLPTPPDLMYLYASHTDEAVHFRQNIRSYNHVFS 204
           C+ C A+ F  E+  FCC  GK+ L  L TPP+LM L++S   +A HFR NIR +N  FS
Sbjct: 179 CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 238

Query: 203 FTSMGVHLDENLASGRRGIYTYRAQGSIYHKIGGLLPQVGQR---PRYLQMYVYDTDHEL 33
           FT++GV LDE   + R G+YT+RA G IYH I       GQR   P +L++Y YD D  L
Sbjct: 239 FTTLGVSLDERYTNMRSGVYTFRAHGQIYHNIHSF----GQRDNAPEHLELYFYDDDPSL 294

Query: 32  VNR 24
            +R
Sbjct: 295 NHR 297


>gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indica Group]
          Length = 909

 Score =  113 bits (282), Expect = 1e-22
 Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 383 CEFCHAELFPSESRVFCCLRGKVNLPLLPTPPDLMYLYASHTDE-AVHFRQNIRSYNHVF 207
           C +C A+ F  ES  +CC +GK+       P +L  L+ S TDE A +FR+NIR +N  F
Sbjct: 272 CSYCGAKRFQYESPAWCCRKGKIVFATHGVPDELHRLFTSQTDEDAKYFRENIRYFNSHF 331

Query: 206 SFTSMGVHLDENLASGRRGIYTYRAQGSIYHKIGGLLPQVGQRPRYLQMYVYDTDHELVN 27
           +FTS+GV LD+   +G  G+YT+RAQG IYH+I  L P     PR+LQ+Y YDTD +L +
Sbjct: 332 AFTSLGVTLDQRYCNGSSGVYTFRAQGQIYHRIDQLQPG-DNGPRHLQLYFYDTDADLSH 390

Query: 26  R 24
           R
Sbjct: 391 R 391


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