BLASTX nr result

ID: Coptis25_contig00016099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016099
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24673.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis ...   110   2e-22
ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_003608067.1| 15 kDa selenoprotein [Medicago truncatula] g...   103   2e-20
gb|AFK48592.1| unknown [Lotus japonicus]                              102   2e-20

>emb|CBI24673.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/61 (81%), Positives = 58/61 (95%)
 Frame = -1

Query: 447 IEEEKDQFPSVRIQYVFNSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSSA 268
           IEEEKD+FPSV++QY+FNSPPKL+MLD+DGQ+KETIRIDNWKREH+LQFL EKVK  SSA
Sbjct: 91  IEEEKDKFPSVKVQYLFNSPPKLIMLDDDGQHKETIRIDNWKREHILQFLREKVKPASSA 150

Query: 267 I 265
           I
Sbjct: 151 I 151


>ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis vinifera]
          Length = 165

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/61 (81%), Positives = 58/61 (95%)
 Frame = -1

Query: 447 IEEEKDQFPSVRIQYVFNSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSSA 268
           IEEEKD+FPSV++QY+FNSPPKL+MLD+DGQ+KETIRIDNWKREH+LQFL EKVK  SSA
Sbjct: 105 IEEEKDKFPSVKVQYLFNSPPKLIMLDDDGQHKETIRIDNWKREHILQFLREKVKPASSA 164

Query: 267 I 265
           I
Sbjct: 165 I 165


>ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|222862926|gb|EEF00433.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/59 (77%), Positives = 56/59 (94%)
 Frame = -1

Query: 447 IEEEKDQFPSVRIQYVFNSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSS 271
           IEEEKDQFP+V++QY+FNSPPKL+MLD++GQ+KETIRIDNWKREH+LQFL EKVK  S+
Sbjct: 91  IEEEKDQFPTVKVQYLFNSPPKLIMLDDEGQHKETIRIDNWKREHMLQFLQEKVKPASA 149


>ref|XP_003608067.1| 15 kDa selenoprotein [Medicago truncatula]
           gi|355509122|gb|AES90264.1| 15 kDa selenoprotein
           [Medicago truncatula] gi|388514921|gb|AFK45522.1|
           unknown [Medicago truncatula]
           gi|388516299|gb|AFK46211.1| unknown [Medicago
           truncatula]
          Length = 160

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/56 (80%), Positives = 54/56 (96%)
 Frame = -1

Query: 447 IEEEKDQFPSVRIQYVFNSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKR 280
           IE+EKDQFPSV++QYVFNSPPKL+MLDN GQ+KETIRIDNWKREH+LQ+L EKV++
Sbjct: 98  IEDEKDQFPSVKVQYVFNSPPKLIMLDNAGQHKETIRIDNWKREHILQYLREKVEK 153


>gb|AFK48592.1| unknown [Lotus japonicus]
          Length = 162

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/59 (77%), Positives = 55/59 (93%)
 Frame = -1

Query: 447 IEEEKDQFPSVRIQYVFNSPPKLVMLDNDGQYKETIRIDNWKREHLLQFLTEKVKRTSS 271
           IEEEKDQFPSV++QYVFNSPPKL+MLD+ GQ KETIR+DNWKREH+LQFL EKVK +++
Sbjct: 103 IEEEKDQFPSVKVQYVFNSPPKLIMLDDVGQQKETIRVDNWKREHILQFLREKVKPSAA 161


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