BLASTX nr result
ID: Coptis25_contig00016089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016089
(729 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAM11099.1| ABC protein [Coptis japonica] 247 5e-87
ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, AB... 239 2e-85
ref|XP_002320939.1| multidrug/pheromone exporter, MDR family, AB... 240 2e-85
ref|XP_002275143.2| PREDICTED: ABC transporter B family member 1... 245 1e-84
ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, AB... 241 1e-84
>dbj|BAM11099.1| ABC protein [Coptis japonica]
Length = 1288
Score = 247 bits (630), Expect(2) = 5e-87
Identities = 130/174 (74%), Positives = 148/174 (85%), Gaps = 11/174 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKENA 419
VISLIERFYDPQ G V IDG+NLK+ +RW+R KIGLVSQEPVLFASSI+DN++YGK+N
Sbjct: 441 VISLIERFYDPQAGAVHIDGINLKDFQIRWIRGKIGLVSQEPVLFASSIKDNIAYGKDNP 500
Query: 420 TMEEIRAA-----------KLPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLLD 566
TMEEIRAA KLPQGLETMV D+GTQLSGG KQRVAIARAILR+P+ILLLD
Sbjct: 501 TMEEIRAAAELANAATFIDKLPQGLETMVGDYGTQLSGGQKQRVAIARAILRDPKILLLD 560
Query: 567 EATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
EATSALDA+SE VQEAL+R M+ RTTI+VAHQL TVRNSD+IAVIH GK+VE+
Sbjct: 561 EATSALDAQSERIVQEALNRIMSKRTTIVVAHQLSTVRNSDVIAVIHQGKIVEQ 614
Score = 100 bits (250), Expect(2) = 5e-87
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 PCMXXXXXXXXXXYSMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQI 175
PCM ++MFET+ KPDIDS DTGG LDDICGDI ++++F YPTRP+E++
Sbjct: 355 PCMKAFAAGQAAAFNMFETIGRKPDIDSFDTGGITLDDICGDIELKEIHFSYPTRPNEKV 414
Query: 176 LAGLSLAIPSGMTVALVGESGSDQS 250
+G SL+IPSG VALVGESGS +S
Sbjct: 415 FSGFSLSIPSGTIVALVGESGSGKS 439
Score = 181 bits (459), Expect(2) = 1e-53
Identities = 98/175 (56%), Positives = 129/175 (73%), Gaps = 12/175 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKENA 419
VISL++RFYD G++ +DG+ +K LRW+R++IGLVSQEP+LF +IR N+ YGKE
Sbjct: 1090 VISLLQRFYDLDSGQIMLDGIAIKNFQLRWLRKQIGLVSQEPLLFNDTIRANIEYGKEGE 1149
Query: 420 TMEE--IRAAK----------LPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLL 563
+ E I AAK + QG +T+V + G QLSGG KQRVAIARAIL++P+ILLL
Sbjct: 1150 SSEAEIIAAAKAANAHKFISGMKQGYDTVVGERGIQLSGGQKQRVAIARAILKSPKILLL 1209
Query: 564 DEATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
DEATSALDAESE VQ+ALD+ M RTTI+VAH+ T++ +D IAVI +G ++EK
Sbjct: 1210 DEATSALDAESERVVQDALDQVMINRTTIVVAHKFYTIKGADSIAVIKNGVIIEK 1264
Score = 55.5 bits (132), Expect(2) = 1e-53
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 SMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQILAGLSLAIPSGMTV 217
S+F ++ K +ID SD+ G L+ + G+I + F YP RP QIL L + G TV
Sbjct: 1018 SVFAILDRKSEIDPSDSSGMTLEKVKGEIIFQHASFTYPIRPDVQILRDLCFTVEPGKTV 1077
Query: 218 ALVGESGSDQS 250
AL+GESG +S
Sbjct: 1078 ALIGESGCGKS 1088
>ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222861715|gb|EEE99257.1|
multidrug/pheromone exporter, MDR family, ABC
transporter family [Populus trichocarpa]
Length = 1294
Score = 239 bits (610), Expect(2) = 2e-85
Identities = 127/174 (72%), Positives = 145/174 (83%), Gaps = 11/174 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKENA 419
VISLIERFYDPQ G+V IDG NLKE L+W+REKIGLVSQEPVLFASSI+DN++YGK+ A
Sbjct: 434 VISLIERFYDPQAGEVLIDGTNLKEFQLKWIREKIGLVSQEPVLFASSIKDNIAYGKDGA 493
Query: 420 TMEEIRAA-----------KLPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLLD 566
T EEIRAA KLPQG++TMV + GTQLSGG KQR+AIARAIL++PRILLLD
Sbjct: 494 TTEEIRAATELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLD 553
Query: 567 EATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
EATSALDAESE VQEALDR M RTT+IVAH+L TV N+DMIAVI+ GK+VEK
Sbjct: 554 EATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVINADMIAVIYRGKMVEK 607
Score = 103 bits (257), Expect(2) = 2e-85
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 PCMXXXXXXXXXXYSMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQI 175
PCM Y MFET+N KP+IDSSDT G+ LDDI GD+ RDVYF YP RP EQI
Sbjct: 348 PCMSAFAAGQAAAYKMFETINRKPEIDSSDTSGKILDDISGDVELRDVYFTYPARPDEQI 407
Query: 176 LAGLSLAIPSGMTVALVGESGSDQS 250
AG SL IPSG T ALVG+SGS +S
Sbjct: 408 FAGFSLFIPSGTTTALVGQSGSGKS 432
Score = 195 bits (496), Expect(2) = 3e-61
Identities = 102/175 (58%), Positives = 137/175 (78%), Gaps = 12/175 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKE-N 416
VISL++RFYDP G + +DG++++ L L+W+R+++GLVSQEPVLF +IR N++YGKE N
Sbjct: 1093 VISLLQRFYDPDSGHITLDGIDIQSLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKEGN 1152
Query: 417 ATMEEIRAAK-----------LPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLL 563
AT EI AA L QG +T+V + GTQLSGG KQRVAIARA++++P+ILLL
Sbjct: 1153 ATEAEILAASELANAHKFISGLQQGYDTVVGERGTQLSGGQKQRVAIARAMVKSPKILLL 1212
Query: 564 DEATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
DEATSALDAESE VQ+ALDR M RTT++VAH+L T++N+D+IAV+ +G +VEK
Sbjct: 1213 DEATSALDAESERVVQDALDRVMVSRTTVVVAHRLSTIKNADVIAVVKNGVIVEK 1267
Score = 66.2 bits (160), Expect(2) = 3e-61
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 SMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQILAGLSLAIPSGMTV 217
S+F ++ K ID SD G LD++ G+I R + F+YP+RP +I LSLAI SG TV
Sbjct: 1021 SIFAIIDRKSKIDPSDESGTTLDNVKGEIELRHISFKYPSRPDIEIFRDLSLAIHSGKTV 1080
Query: 218 ALVGESGSDQS 250
ALVGESGS +S
Sbjct: 1081 ALVGESGSGKS 1091
>ref|XP_002320939.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222861712|gb|EEE99254.1|
multidrug/pheromone exporter, MDR family, ABC
transporter family [Populus trichocarpa]
Length = 1294
Score = 240 bits (612), Expect(2) = 2e-85
Identities = 126/174 (72%), Positives = 143/174 (82%), Gaps = 11/174 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKENA 419
VISLIERFYDPQ G+V IDG NLKE L+W+REKIGLVSQEPVLF SSIRDN++YGK+ A
Sbjct: 434 VISLIERFYDPQAGEVLIDGTNLKEFQLKWIREKIGLVSQEPVLFTSSIRDNIAYGKDGA 493
Query: 420 TMEEIRAA-----------KLPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLLD 566
T EEIRA KLPQGL+TMV + GTQ+SGG KQR+AIARAIL++PRILLLD
Sbjct: 494 TTEEIRAVAELANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRIAIARAILKDPRILLLD 553
Query: 567 EATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
EATSALDAESE VQEALDR M RTT+IVAH+L TVRN D+I+VIH GK+VEK
Sbjct: 554 EATSALDAESERIVQEALDRIMVNRTTLIVAHRLSTVRNVDLISVIHHGKIVEK 607
Score = 102 bits (254), Expect(2) = 2e-85
Identities = 52/85 (61%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 PCMXXXXXXXXXXYSMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQI 175
PCM Y MFET+N KP+IDSSDT G+ LDDI GD+ RDVYF YP RP EQI
Sbjct: 348 PCMSAFAAGQAAAYKMFETINRKPEIDSSDTSGKILDDISGDVELRDVYFTYPARPDEQI 407
Query: 176 LAGLSLAIPSGMTVALVGESGSDQS 250
+G SL IPSG T ALVG+SGS +S
Sbjct: 408 FSGFSLFIPSGTTTALVGQSGSGKS 432
Score = 192 bits (487), Expect(2) = 2e-60
Identities = 100/175 (57%), Positives = 136/175 (77%), Gaps = 12/175 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKEN- 416
VISL++RFYDP G + +DGV+++ L L+W+R+++GLVSQEPVLF +IR N++YGK+
Sbjct: 1093 VISLLQRFYDPHSGHITLDGVDIQSLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKQGK 1152
Query: 417 ATMEEIRAAK-----------LPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLL 563
AT EI AA L QG +T+V + G QLSGG KQRVAIARAI+++PR+LLL
Sbjct: 1153 ATETEILAASELANAHNFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIVKSPRVLLL 1212
Query: 564 DEATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
DEATSALDAESE +VQ+ALDR + RTT++VAH+L T++N+D+IAV+ +G +VEK
Sbjct: 1213 DEATSALDAESERTVQDALDRVVVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEK 1267
Score = 67.4 bits (163), Expect(2) = 2e-60
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 SMFETMNIKPDIDSSDTGGRKLDDICGDIR--DVYFRYPTRPHEQILAGLSLAIPSGMTV 217
S+F ++ K +D+SD G KLD + G+I + F+YPTRP QI LSL I SG TV
Sbjct: 1021 SIFSIIDRKSKMDASDESGTKLDSVRGEIELHHISFKYPTRPDIQIFRDLSLVIHSGKTV 1080
Query: 218 ALVGESGSDQS 250
ALVGESGS +S
Sbjct: 1081 ALVGESGSGKS 1091
>ref|XP_002275143.2| PREDICTED: ABC transporter B family member 11-like [Vitis vinifera]
Length = 1294
Score = 245 bits (625), Expect(2) = 1e-84
Identities = 131/174 (75%), Positives = 146/174 (83%), Gaps = 11/174 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKENA 419
VISLIERFYDPQ G+V IDG+NLKE LRW+R KIGLVSQEPVLF SSIRDN++YGK+ A
Sbjct: 438 VISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFTSSIRDNIAYGKDGA 497
Query: 420 TMEEIRAA-----------KLPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLLD 566
T+EEIRAA KLPQGL+T+V + GTQLSGG KQRVAIARAIL++PRILLLD
Sbjct: 498 TIEEIRAAAELANASKFIDKLPQGLDTLVGEHGTQLSGGQKQRVAIARAILKDPRILLLD 557
Query: 567 EATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
EATSALDAESE VQEALDR M RTTIIVAH+L TVRN+DMIAVIH GK+VEK
Sbjct: 558 EATSALDAESERVVQEALDRVMINRTTIIVAHRLSTVRNADMIAVIHRGKIVEK 611
Score = 94.7 bits (234), Expect(2) = 1e-84
Identities = 47/85 (55%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 PCMXXXXXXXXXXYSMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQI 175
PC+ + MFET+ KP+ID+ + G+KLDDI GD+ RDVYF YPTRP EQ+
Sbjct: 352 PCLSAFGSGQAAAFKMFETIERKPEIDAYSSDGQKLDDIQGDVELRDVYFSYPTRPDEQV 411
Query: 176 LAGLSLAIPSGMTVALVGESGSDQS 250
G SL+IPSG T ALVGESGS +S
Sbjct: 412 FKGFSLSIPSGTTAALVGESGSGKS 436
Score = 188 bits (477), Expect(2) = 7e-59
Identities = 100/174 (57%), Positives = 131/174 (75%), Gaps = 12/174 (6%)
Frame = +3
Query: 243 ISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKE-NA 419
ISL++RFYDP G + +DGV +++L L+W R+++GLVSQEPVLF +IR N++YGKE NA
Sbjct: 1095 ISLLQRFYDPDSGHITLDGVEIQKLQLKWFRQQMGLVSQEPVLFNETIRANIAYGKEGNA 1154
Query: 420 TMEEIRAAK-----------LPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLLD 566
T EI AA L QG +T V + G QLSGG KQRVAIARAI+++P+ILLLD
Sbjct: 1155 TEAEISAAAELANAHKFISGLQQGYDTTVGERGIQLSGGQKQRVAIARAIVKDPKILLLD 1214
Query: 567 EATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
EATSALDAESE VQ+ALDR M RTT++VAH+L T++ +D+IAV+ +G + EK
Sbjct: 1215 EATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGADLIAVVKNGAIAEK 1268
Score = 65.9 bits (159), Expect(2) = 7e-59
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 SMFETMNIKPDIDSSDTGGRKLDDICGDIR--DVYFRYPTRPHEQILAGLSLAIPSGMTV 217
S+F ++ + IDSSD G L+++ G+I V FRYPTRP QI L LAI SG TV
Sbjct: 1022 SIFAILDRESKIDSSDESGTTLENVKGEIEFHHVSFRYPTRPDIQIFRDLCLAIHSGKTV 1081
Query: 218 ALVGESGSDQS 250
ALVGESGS +S
Sbjct: 1082 ALVGESGSGKS 1092
>ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222843273|gb|EEE80820.1|
multidrug/pheromone exporter, MDR family, ABC
transporter family [Populus trichocarpa]
Length = 1224
Score = 241 bits (615), Expect(2) = 1e-84
Identities = 127/174 (72%), Positives = 146/174 (83%), Gaps = 11/174 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKENA 419
VISLIERFYDPQ G+V IDG+NLKE L+W+REKIGLVSQEPVLF SSI+DN++YGK+ A
Sbjct: 368 VISLIERFYDPQAGEVLIDGINLKEFQLKWIREKIGLVSQEPVLFTSSIKDNIAYGKDMA 427
Query: 420 TMEEIRAA-----------KLPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLLD 566
T EEIRAA KLPQG++TMV + GTQLSGG KQR+AIARAIL++PRILLLD
Sbjct: 428 TTEEIRAAAELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLD 487
Query: 567 EATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
EATSALDAESE VQEALDR M RTT+IVAH+L TVRN+DMIAVI+ GK+VEK
Sbjct: 488 EATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIYRGKMVEK 541
Score = 98.6 bits (244), Expect(2) = 1e-84
Identities = 51/85 (60%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 PCMXXXXXXXXXXYSMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQI 175
PCM Y MFE +N KP+ID+SDT G+ LDDI GDI RDVYF YP RP EQI
Sbjct: 282 PCMSAFASGQAAAYKMFEAINRKPEIDASDTRGKILDDIRGDIELRDVYFNYPARPDEQI 341
Query: 176 LAGLSLAIPSGMTVALVGESGSDQS 250
+G SL IPSG T ALVG+SGS +S
Sbjct: 342 FSGFSLFIPSGSTAALVGQSGSGKS 366
Score = 194 bits (492), Expect(2) = 3e-61
Identities = 102/175 (58%), Positives = 136/175 (77%), Gaps = 12/175 (6%)
Frame = +3
Query: 240 VISLIERFYDPQFGKVFIDGVNLKELLLRWVREKIGLVSQEPVLFASSIRDNVSYGKE-N 416
VISL++RFYDP G + +DG+++K L L+W+R+++GLVSQEPVLF +IR N++YGKE +
Sbjct: 1023 VISLLQRFYDPHSGHITLDGIDIKSLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKEGD 1082
Query: 417 ATMEEIRAAK-----------LPQGLETMVVDFGTQLSGG*KQRVAIARAILRNPRILLL 563
AT EI AA L QG +T+V + G QLSGG KQRVAIARAI+++P+ILLL
Sbjct: 1083 ATEAEILAASELANAHKFISSLQQGYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLL 1142
Query: 564 DEATSALDAESEWSVQEALDRFMTGRTTIIVAHQLGTVRNSDMIAVIHDGKVVEK 728
DEATSALDAESE VQ+ALDR M RTT++VAH+L T++N+D+IAV+ +G +VEK
Sbjct: 1143 DEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEK 1197
Score = 68.2 bits (165), Expect(2) = 3e-61
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 SMFETMNIKPDIDSSDTGGRKLDDICGDI--RDVYFRYPTRPHEQILAGLSLAIPSGMTV 217
S+F ++ K IDSSD G LD++ G+I R + F+YP RP +I LSLAI SG TV
Sbjct: 951 SIFSIIDRKSQIDSSDESGTTLDNVKGEIELRHIGFKYPARPDIEIFRDLSLAIHSGKTV 1010
Query: 218 ALVGESGSDQS 250
ALVGESGS +S
Sbjct: 1011 ALVGESGSGKS 1021