BLASTX nr result

ID: Coptis25_contig00016084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016084
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66554.1| hypothetical protein VITISV_018915 [Vitis vinifera]    79   1e-12
ref|XP_003634169.1| PREDICTED: uncharacterized protein LOC100252...    79   2e-12
gb|AFK33769.1| unknown [Lotus japonicus]                               73   1e-10
ref|XP_003603577.1| hypothetical protein MTR_3g109290 [Medicago ...    72   2e-10
ref|XP_002513557.1| conserved hypothetical protein [Ricinus comm...    72   3e-10

>emb|CAN66554.1| hypothetical protein VITISV_018915 [Vitis vinifera]
          Length = 123

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = -3

Query: 430 MKNNLQRLFSSLIEIPKSKXXXXXXXXXXXXXSNSRGIFTSFILQNQHQTPENFDNKKEE 251
           M +NL R+FSSLI++   +             S +    +  +  +  Q P++ + ++EE
Sbjct: 1   MSSNLSRVFSSLIDLSAPRLGLACARSRCGSESLTHSNTSRRLFCSSAQQPQHREKQEEE 60

Query: 250 ETDSETLXXXXXXXXXXXXXEGDIDEYG----VNRKTGEVGGPKGPEPTRYGDWERGGRC 83
           E  S                  + DE G    VN +TGE+GGPKGPEPTRYGDWER GRC
Sbjct: 61  EEVSSFSGNKQSPDGENGEEVEEEDEGGGGVHVNEQTGEIGGPKGPEPTRYGDWERNGRC 120

Query: 82  SDF 74
           SDF
Sbjct: 121 SDF 123


>ref|XP_003634169.1| PREDICTED: uncharacterized protein LOC100252005 [Vitis vinifera]
          Length = 123

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = -3

Query: 430 MKNNLQRLFSSLIEIPKSKXXXXXXXXXXXXXSNSRGIFTSFILQNQHQTPENFDNKKEE 251
           M +NL R+FSSLI++   +             S +    +  +  +  Q P++ + ++EE
Sbjct: 1   MSSNLSRVFSSLIDLSAPRLGLACARSRCGSESLTHSNTSRRLFCSSAQQPQHREKQEEE 60

Query: 250 ETDSETLXXXXXXXXXXXXXEGDIDEYG----VNRKTGEVGGPKGPEPTRYGDWERGGRC 83
           E  S                  + DE G    VN +TGE+GGPKGPEPTRYGDWER GRC
Sbjct: 61  EEVSPFSGNKQSPDGENGEEVEEEDEGGGGVHVNEQTGEIGGPKGPEPTRYGDWERNGRC 120

Query: 82  SDF 74
           SDF
Sbjct: 121 SDF 123


>gb|AFK33769.1| unknown [Lotus japonicus]
          Length = 115

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -3

Query: 184 DIDEYGVNRKTGEVGGPKGPEPTRYGDWERGGRCSDF 74
           D D+  VN++TGEVGGPKGPEPTRYGDWER GRCSDF
Sbjct: 79  DDDDVDVNKETGEVGGPKGPEPTRYGDWERNGRCSDF 115


>ref|XP_003603577.1| hypothetical protein MTR_3g109290 [Medicago truncatula]
           gi|355492625|gb|AES73828.1| hypothetical protein
           MTR_3g109290 [Medicago truncatula]
          Length = 116

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 37/85 (43%), Positives = 46/85 (54%)
 Frame = -3

Query: 328 SRGIFTSFILQNQHQTPENFDNKKEEETDSETLXXXXXXXXXXXXXEGDIDEYGVNRKTG 149
           +R +F+S    + H   E     K E    +               + DID   +N++TG
Sbjct: 35  TRLLFSSSSSTHHHNEKEQTQTPKPESLHDDDKQSQKEEEEEEEDNDDDID---MNKETG 91

Query: 148 EVGGPKGPEPTRYGDWERGGRCSDF 74
           EVGGPKGPEPTRYGDWER GRCSDF
Sbjct: 92  EVGGPKGPEPTRYGDWERNGRCSDF 116


>ref|XP_002513557.1| conserved hypothetical protein [Ricinus communis]
           gi|223547465|gb|EEF48960.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 106

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 46/118 (38%), Positives = 60/118 (50%)
 Frame = -3

Query: 427 KNNLQRLFSSLIEIPKSKXXXXXXXXXXXXXSNSRGIFTSFILQNQHQTPENFDNKKEEE 248
           +NNL RL SS   +                  +SR I +S   Q Q Q  +N  NK+ EE
Sbjct: 3   RNNLGRLLSSSASLSNLSTRSESVIRS-----SSRMISSSSTSQPQSQDTQN--NKEGEE 55

Query: 247 TDSETLXXXXXXXXXXXXXEGDIDEYGVNRKTGEVGGPKGPEPTRYGDWERGGRCSDF 74
            + +               + + D+  VN++TGE+GGPKGPEPTRYGDWE  GRCSDF
Sbjct: 56  ENKKK-------PEIGSKEDQEYDDEFVNKETGEIGGPKGPEPTRYGDWELNGRCSDF 106


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