BLASTX nr result
ID: Coptis25_contig00016083
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016083 (1401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [... 89 4e-15 ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2... 85 4e-14 dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 5e-14 ref|XP_002274832.1| PREDICTED: pre-rRNA-processing protein TSR2 ... 83 2e-13 ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817... 82 3e-13 >ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis] gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis] Length = 213 Score = 88.6 bits (218), Expect = 4e-15 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 4/210 (1%) Frame = +2 Query: 113 SSNGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSF 292 + NGSL ++L PE +PL E I+ I++ +WS +A++ WGG Q + +I S+ Sbjct: 10 NQNGSLTKQLPPESVPLFQEGIFLILS-RWSALQLAVENEWGGRGSRQLADQIGFDIFSW 68 Query: 293 FTHSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR 472 FT SK P Y+D+L + LD+ L ++D S E+VA+ L+ MHEE L + +IE+LR Sbjct: 69 FTQSKEPLYIDDLENILDE-GMISLNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLR 127 Query: 473 NXXXXXXXXXXXK----XXXXXXXXXXXXXXXXXXXXXXFMEVDEPKPRLGSKVKTMSVD 640 + M +D PK + M V+ Sbjct: 128 QARPTAGVHQHIRQAANGDDDEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVN 187 Query: 641 EMKSQGTSEGADDGWSLVSYRSRRNKGKRH 730 E Q +D W+++S S++N+GKR+ Sbjct: 188 EPSCQEAQ--VEDEWTVIS--SKKNRGKRN 213 >ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1| predicted protein [Populus trichocarpa] Length = 212 Score = 85.1 bits (209), Expect = 4e-14 Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 2/208 (0%) Frame = +2 Query: 113 SSNGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSF 292 S GS+ Q L + + E I R+I +WS +A++ WGG AS+I S+ Sbjct: 13 SQIGSVKQ-LTADSISQFREGI-RLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSW 70 Query: 293 FTHSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR 472 FT SK P Y+D+L +D+ A L ++D S E+VA+ L+ MHEE L + SI+KLR Sbjct: 71 FTQSKEPLYIDDLESIMDE-AMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLR 129 Query: 473 NXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXF-MEVDEPKPRLGSKVKTMSVDEMK 649 + K M VD P+ +L + + V+E Sbjct: 130 DEGPRMGAHQHVKQAVEDDDDSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNE-- 187 Query: 650 SQGTSEG-ADDGWSLVSYRSRRNKGKRH 730 G E ++DGW++VS SRRNKGKR+ Sbjct: 188 -PGAKEAQSEDGWTVVS--SRRNKGKRN 212 >dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 191 Score = 84.7 bits (208), Expect = 5e-14 Identities = 43/112 (38%), Positives = 67/112 (59%) Frame = +2 Query: 140 LKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTHSKGPFY 319 L P+ L E I + +W+ MA++ GWGG K + A+++LSFFT SKGP+Y Sbjct: 11 LSPQAAAALQEGIGLVFG-RWTALQMAVENGWGGRESRAKADRLAADVLSFFTGSKGPYY 69 Query: 320 VDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 475 D+L + + D + D +D S +VA+ ++ MHEE L+++ SI+KLRN Sbjct: 70 YDDLEEMMFDSISEFFNADFEDGSVGEVAEQVLIMHEECLQNNYSSIDKLRN 121 >ref|XP_002274832.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Vitis vinifera] gi|298204922|emb|CBI34229.3| unnamed protein product [Vitis vinifera] Length = 208 Score = 83.2 bits (204), Expect = 2e-13 Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 6/210 (2%) Frame = +2 Query: 119 NGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFT 298 +G + +L E L + I +++ QWS MA+ WGG Q + A +I S+FT Sbjct: 3 SGGVAPQLSEEATHHLQQGIVMLLS-QWSALQMAVHNEWGGRQSSQLADQLALDIFSWFT 61 Query: 299 HSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR-- 472 HS+ P Y+D+L + LD+ A L +D S E+VA+ L+ MHEE L + +SIEKLR Sbjct: 62 HSREPLYIDDLENILDE-AMLSLNTMTEDGSIEEVAEKLMTMHEECLEGNYQSIEKLREA 120 Query: 473 --NXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXFMEVDEPK-PRLGSKVKTMSVDE 643 + M VD P+ P M V+E Sbjct: 121 GSRPAVHHIRQAVNEDNDDDDDDDDDNDENMGNDNSSNMIVDAPEAPPPNLNPAEMPVEE 180 Query: 644 MKSQGTSEG-ADDGWSLVSYRSRRNKGKRH 730 ++ ADDGW +V+ S+RN+GKR+ Sbjct: 181 PRASNPKVAEADDGWVVVA--SKRNRGKRN 208 >ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max] Length = 203 Score = 82.0 bits (201), Expect = 3e-13 Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 8/207 (3%) Frame = +2 Query: 134 QKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTHSKGP 313 ++L+ + + SE I ++ +WS + A++ WGG K + AS+ILS+FT SK P Sbjct: 5 RRLRGHSIGVFSEGIGLVLF-RWSTLLTAVENEWGGHESRVKADQLASDILSWFTQSKEP 63 Query: 314 FYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRNXXXXXX 493 Y+D+L D LD L ++++D S E+VA+ L+ MHEE L D+ S E LR Sbjct: 64 LYIDDLEDILDQ-GMLSLNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENLRK----AN 118 Query: 494 XXXXXKXXXXXXXXXXXXXXXXXXXXXXFMEVDEPKPRLGSKVKTMSVDEMKSQGTSEG- 670 + M VD+ + + T + + G Sbjct: 119 LEHAARPPVPQIVNDDEDDTDEDVGNDENMIVDDNSSNMNPETSTSVANTNSVNRSVNGP 178 Query: 671 -------ADDGWSLVSYRSRRNKGKRH 730 ADDGW +VS +RRNKG+++ Sbjct: 179 LPKVSGEADDGWVVVS--NRRNKGRKN 203