BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016081
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...    59   5e-07
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_004173761.1| PREDICTED: flap endonuclease GEN-like 2-like...    57   1e-06
ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like...    57   1e-06
ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...    57   1e-06

>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
 Frame = -1

Query: 177 VIDILSPSPCK---TWKLQKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIKTDV 7
           VID+LSPSP K   + K   + D  +DVI +S+SE + SPE+ +KA+ELR+F+ASI+ ++
Sbjct: 511 VIDLLSPSPLKPSNSSKFHPSSDQNIDVINLSDSENEVSPEHKQKAKELRMFLASIRNEI 570


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
 Frame = -1

Query: 180 EVIDILSPSPCKTWKL----QKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIKT 13
           EVID+ SPSP    +     Q+  D   +VI +SESE + SPE+ARKAR LR+FIASI+ 
Sbjct: 479 EVIDLCSPSPVARTRTVSRCQRVNDQHSEVIDLSESENEMSPEHARKARALRMFIASIRD 538

Query: 12  DVS 4
           D+S
Sbjct: 539 DMS 541


>ref|XP_004173761.1| PREDICTED: flap endonuclease GEN-like 2-like, partial [Cucumis
           sativus]
          Length = 294

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
 Frame = -1

Query: 180 EVIDILSPSPC----KTWKLQKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIK 16
           EVID+LSPSP        K Q+     +DVI +S++E D SPE+ RKARELR F+AS+K
Sbjct: 234 EVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 292


>ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
          Length = 563

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
 Frame = -1

Query: 180 EVIDILSPSPC----KTWKLQKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIK 16
           EVID+LSPSP        K Q+     +DVI +S++E D SPE+ RKARELR F+AS+K
Sbjct: 503 EVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 561


>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
 Frame = -1

Query: 222 RGAHTELPIGKALP-----EVIDILSPSPCKTWKL----QKTIDPLVDVIYVSESETDTS 70
           RG    +P   A P     ++ID+LSPSP   +++    Q+  D  +DVI +S+SET+ S
Sbjct: 507 RGHDATVPSFHASPSLPKIDIIDLLSPSPPPQFRMVPRCQEASDKCIDVIDLSDSETEMS 566

Query: 69  PEYARKARELRLFIASIK 16
            E+ARKARELR F+A I+
Sbjct: 567 AEHARKARELRSFLAGIR 584