BLASTX nr result

ID: Coptis25_contig00016070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016070
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315048.1| predicted protein [Populus trichocarpa] gi|2...    73   7e-11
ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductas...    72   1e-10
ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10
ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatul...    69   8e-10
ref|NP_172871.1| glucose-methanol-choline oxidoreductase-like pr...    67   4e-09

>ref|XP_002315048.1| predicted protein [Populus trichocarpa] gi|222864088|gb|EEF01219.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 49/122 (40%), Positives = 59/122 (48%)
 Frame = -3

Query: 675 VEMVHEMKKIARSMDSVLGTKYCDRMDEIISGQKQEHNVETKKGVSTEEELREFCKKNKM 496
           V+MV  +KK+ARS           R      G K   NV      S   ELR FC+KN  
Sbjct: 421 VQMVQLVKKVARS-----------RSIARFLGAKPLINV-----TSNPNELRNFCRKNVR 464

Query: 495 SYLXXXXXXXXXXXVDRDYKVFGVEALRXXXXXXXXXXXSTSPMGTLLMLGRYQGIKMLR 316
           +Y            +D DYKV GV+ LR            T+PM TLLMLGRYQGIK+L+
Sbjct: 465 TYYHFHGGCSIGSVIDNDYKVIGVKGLRVIDGSTLSESPGTNPMATLLMLGRYQGIKILK 524

Query: 315 ER 310
           ER
Sbjct: 525 ER 526


>ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
           communis] gi|223538333|gb|EEF39940.1|
           glucose-methanol-choline (gmc) oxidoreductase, putative
           [Ricinus communis]
          Length = 537

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = -3

Query: 543 VSTEEELREFCKKNKMSYLXXXXXXXXXXXVDRDYKVFGVEALRXXXXXXXXXXXSTSPM 364
           +S+  ELR+FCKKN  +Y            VD DYKV+GV+ LR            T+PM
Sbjct: 448 LSSPHELRDFCKKNVRTYYHYHGGCTVGSVVDNDYKVYGVKGLRVIDGSTFLESPGTNPM 507

Query: 363 GTLLMLGRYQGIKMLRER 310
            TLLMLGRYQGI++LR+R
Sbjct: 508 ATLLMLGRYQGIRILRDR 525


>ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|222864087|gb|EEF01218.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 41/118 (34%), Positives = 65/118 (55%)
 Frame = -3

Query: 666 VHEMKKIARSMDSVLGTKYCDRMDEIISGQKQEHNVETKKGVSTEEELREFCKKNKMSYL 487
           + E  K+ + ++ + G+    R   +  G++ ++N+     +S+++ELR FCKKN  +Y 
Sbjct: 381 LEECTKMVQLLNKIAGS----RSVVLFLGKEPQNNL-----MSSQDELRNFCKKNVRTYY 431

Query: 486 XXXXXXXXXXXVDRDYKVFGVEALRXXXXXXXXXXXSTSPMGTLLMLGRYQGIKMLRE 313
                      VD DYKV G++ LR            T+PM T+LMLGRYQGIK++RE
Sbjct: 432 HYHGGSTVGSVVDDDYKVHGIKGLRVIDGSTFLESPGTNPMATVLMLGRYQGIKIVRE 489


>ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatula]
           gi|355515154|gb|AES96777.1| (R)-mandelonitrile lyase
           [Medicago truncatula]
          Length = 543

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = -3

Query: 558 ETKKGVSTEEELREFCKKNKMSYLXXXXXXXXXXXVDRDYKVFGVEALRXXXXXXXXXXX 379
           +  K VSTE +LR+FCKKN  +             +D+DYKV G++ L+           
Sbjct: 449 QQSKLVSTEFDLRKFCKKNVRTIYHYHGGCNVGTVLDKDYKVHGIKGLKVLDGSTFSESP 508

Query: 378 STSPMGTLLMLGRYQGIKMLRER 310
            T+PM TLLMLGRYQGIK+L++R
Sbjct: 509 GTNPMATLLMLGRYQGIKILQQR 531


>ref|NP_172871.1| glucose-methanol-choline oxidoreductase-like protein [Arabidopsis
           thaliana] gi|5080795|gb|AAD39305.1|AC007576_28 Similar
           to mandelonitrile lyase [Arabidopsis thaliana]
           gi|332190999|gb|AEE29120.1| glucose-methanol-choline
           oxidoreductase-like protein [Arabidopsis thaliana]
          Length = 501

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
 Frame = -3

Query: 675 VEMVHEMKKIARS--MDSVLGTKYCDRMDEIISGQKQEHNVETKKGVSTEEELREFCKKN 502
           +EMV  ++ +ARS  +   LGT+  D++                  V+ +EEL+ FC KN
Sbjct: 378 LEMVLHLQHVARSETVTFFLGTQAHDKL------------------VAGDEELKSFCIKN 419

Query: 501 KMSYLXXXXXXXXXXXVDRDYKVFGVEALRXXXXXXXXXXXSTSPMGTLLMLGRYQGIKM 322
             +Y            VD +YKV GV+ LR            T+PM T+LMLGRYQGIK+
Sbjct: 420 VRTYYHYHGGCVVGSVVDEEYKVNGVKRLRVVDGSTFEESPGTNPMATVLMLGRYQGIKI 479

Query: 321 LRER 310
           L+ER
Sbjct: 480 LKER 483


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