BLASTX nr result

ID: Coptis25_contig00016068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016068
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280044.1| PREDICTED: uncharacterized protein LOC100250...   111   2e-22
emb|CBI37655.3| unnamed protein product [Vitis vinifera]              104   2e-20
emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]    99   8e-19
ref|XP_003526762.1| PREDICTED: uncharacterized protein LOC100803...    99   1e-18
ref|XP_003523998.1| PREDICTED: uncharacterized protein LOC100802...    95   2e-17

>ref|XP_002280044.1| PREDICTED: uncharacterized protein LOC100250489 [Vitis vinifera]
          Length = 290

 Score =  111 bits (278), Expect = 2e-22
 Identities = 68/162 (41%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
 Frame = -3

Query: 756 SRQFSHGIQETPRQQIPVQGPKGFSA--FAHIPGASLNPYPSGGPSLPVSLGKPVDALPV 583
           S QF   +Q+ P+QQ  ++    + A  FA IP ASL  +  G PS+P+S+GKP + L  
Sbjct: 120 STQFCQNMQQIPQQQTQMKDRNAYCAPAFAPIPLASLVTFAFGEPSVPLSMGKPSNELLD 179

Query: 582 RELNH-PAGSPAVIPLDSQKEDDQHFMERFHRLQAFLKSYDNSSHEEYTQMLRALTSAGR 406
            E N+    S     + S++ DDQ   ERF RLQ  LK  D     +Y QMLR+ + +  
Sbjct: 180 VESNYLKVTSEVPHSVHSKETDDQQRKERFLRLQKVLKQCDEFDQNDYIQMLRSFSPSEL 239

Query: 405 SKHAVELEKRAIHXXXXXXXXXERMKVLNVLGKATPKDNASP 280
           S+HA+ELEKRAI          +RMK LN+LGK+ PK+N SP
Sbjct: 240 SRHAIELEKRAIQLTVEEGKEIQRMKELNILGKSVPKNNPSP 281


>emb|CBI37655.3| unnamed protein product [Vitis vinifera]
          Length = 146

 Score =  104 bits (260), Expect = 2e-20
 Identities = 66/141 (46%), Positives = 81/141 (57%)
 Frame = -3

Query: 690 GFSAFAHIPGASLNPYPSGGPSLPVSLGKPVDALPVRELNHPAGSPAVIPLDSQKEDDQH 511
           GFS F+ IP A      SG PS+P+ LGKPV+        H A S      +SQ   + H
Sbjct: 8   GFSTFSSIPAAPTTT-SSGVPSVPIPLGKPVNG------PHGANSEVSCSENSQDVANMH 60

Query: 510 FMERFHRLQAFLKSYDNSSHEEYTQMLRALTSAGRSKHAVELEKRAIHXXXXXXXXXERM 331
           + ER  +L+A+LK  D+S+ E Y Q LR+ TSA RS+HAVELEKRAIH         ER+
Sbjct: 61  WGERLIQLEAYLKDCDHSNQEAYVQKLRSFTSAERSRHAVELEKRAIHLFLEEGRELERI 120

Query: 330 KVLNVLGKATPKDNASPSATP 268
           K LNVLGK   K N  P  TP
Sbjct: 121 KALNVLGKYDTK-NVPPQLTP 140


>emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]
          Length = 511

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 65/162 (40%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
 Frame = -3

Query: 756 SRQFSHGIQETPRQQIPVQGPKGFSA--FAHIPGASLNPYPSGGPSLPVSLGKPVDALPV 583
           S QF   +Q+ P QQ  ++    + A  FA IP ASL  +  G PS+P+S+GKP + L  
Sbjct: 187 STQFCQNMQQIPZQQTQMKDRNAYCAPAFAPIPLASLVTFAFGEPSVPLSMGKPSNELLD 246

Query: 582 RELNH-PAGSPAVIPLDSQKEDDQHFMERFHRLQAFLKSYDNSSHEEYTQMLRALTSAGR 406
            E N+    S     + S++ DDQ   ERF RLQ  LK  D     +Y Q       +  
Sbjct: 247 VESNYLKVTSEVPHSVHSKETDDQQRKERFLRLQKVLKQCDEFDQNDYIQ---TFPRSEL 303

Query: 405 SKHAVELEKRAIHXXXXXXXXXERMKVLNVLGKATPKDNASP 280
           S+HA+ELEKRAI          +RMK LN+LGK+ PK+N SP
Sbjct: 304 SRHAIELEKRAIQLTVEEGKEIQRMKELNILGKSVPKNNPSP 345


>ref|XP_003526762.1| PREDICTED: uncharacterized protein LOC100803861 [Glycine max]
          Length = 307

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 73/185 (39%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
 Frame = -3

Query: 765 CPQSRQFSHGIQETPRQQIPVQGPKG--------FSAFAHIPGASLNPYPSGGPSLPVSL 610
           CP SRQ   G +ET + +   + P          F AFA  P AS +   SG PS+P+SL
Sbjct: 126 CPHSRQLCCG-EETAQPKSQTKEPPQLKEPKVSCFPAFAPFPMAS-SMNSSGKPSVPISL 183

Query: 609 GKPVDALPVRELNHPAGSPAVIPLDSQKE-DDQHFMERFHRLQAFLKSYDNSSHEEYTQM 433
           GK    L   E N+   S     + + K   + H+ ER+ +LQ FL+  D S  EEY QM
Sbjct: 184 GKSAMKLAPVESNYVTASSGPTTIGNPKGLKNLHWEERYQQLQMFLRKLDQSDQEEYIQM 243

Query: 432 LRALTSAGRSKHAVELEKRAIHXXXXXXXXXERMKVLNVLGKATPKDNASPSATPASSGK 253
           LR+L+S   SKHAVELEKR+I          +R+ VLNVLGK+  K+  +P+     S K
Sbjct: 244 LRSLSSVELSKHAVELEKRSIQLSLEEAKELQRVAVLNVLGKSV-KNFKAPADHDECSDK 302

Query: 252 *EQLS 238
            + LS
Sbjct: 303 LKALS 307


>ref|XP_003523998.1| PREDICTED: uncharacterized protein LOC100802245 [Glycine max]
          Length = 306

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
 Frame = -3

Query: 774 NGGCPQSRQFSHGIQET--PRQQIP----VQGPKG--FSAFAHIPGASLNPYPSGGPSLP 619
           N  C  SRQ     +ET  P+ QI     ++ PK   F AFA  P AS +   SG PS+P
Sbjct: 122 NAYCSHSRQLCCE-EETAQPKSQIKEPPQLKEPKASCFPAFAPFPMAS-SMNSSGKPSVP 179

Query: 618 VSLGKPVDALPVRELNHPAGSPAVIPLDSQKE-DDQHFMERFHRLQAFLKSYDNSSHEEY 442
           +SLGK    L   E N+   S     + + K   + H+ ER+ +LQ FL+  D S  EEY
Sbjct: 180 ISLGKSAKKLAPVESNYVTASSGPTTIGNPKGLKNLHWDERYQQLQMFLRKLDQSDREEY 239

Query: 441 TQMLRALTSAGRSKHAVELEKRAIHXXXXXXXXXERMKVLNVLGKATPKDNASPSATPAS 262
            QML +L+S   SKHAVELEKR+I          +R+ VLNVLGK+  K+  +P+     
Sbjct: 240 IQMLHSLSSVELSKHAVELEKRSIQLSLEEAKELQRVAVLNVLGKSV-KNFKAPADYDEC 298

Query: 261 SGK*EQLS 238
           S K + LS
Sbjct: 299 SDKLKTLS 306


Top