BLASTX nr result
ID: Coptis25_contig00016066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016066
(1792 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus ... 624 0.0
ref|XP_004143277.1| PREDICTED: histidine--tRNA ligase-like [Cucu... 616 0.0
ref|XP_004156273.1| PREDICTED: histidine--tRNA ligase-like [Cucu... 614 0.0
ref|XP_002277086.1| PREDICTED: histidyl-tRNA synthetase-like [Vi... 619 0.0
ref|XP_002326196.1| predicted protein [Populus trichocarpa] gi|2... 592 0.0
>ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus communis]
gi|223541355|gb|EEF42906.1| histidyl-tRNA synthetase,
putative [Ricinus communis]
Length = 503
Score = 624 bits (1609), Expect(2) = 0.0
Identities = 308/386 (79%), Positives = 345/386 (89%)
Frame = -1
Query: 1309 GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSV 1130
GFEEVDFPVLE+EALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKSV
Sbjct: 118 GFEEVDFPVLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSV 177
Query: 1129 PLPLKWFAIGQCWXXXXXXXXXXREHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITS 950
PLPLKWFA+GQCW REHYQWNMDIIGVP VTAEAELISSIVTFFKR+GIT+
Sbjct: 178 PLPLKWFAVGQCWRYERMTRGRRREHYQWNMDIIGVPGVTAEAELISSIVTFFKRIGITA 237
Query: 949 SDVGFRVSSRKVLQEVLRCYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGISEEAIE 770
SDVGF+VSSRKVLQEVLRCYS+ +NLF KVCIIIDK+EKIP +IK++LK+ G+SEEA+E
Sbjct: 238 SDVGFKVSSRKVLQEVLRCYSISDNLFGKVCIIIDKIEKIPVAEIKKELKSVGMSEEAVE 297
Query: 769 ELLQVLSIKSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGI 590
ELLQVLSIKSL+KLEEILG +G+A+ +LK LFSLA+KFGYS+WIQFDASVVRGLAYYTGI
Sbjct: 298 ELLQVLSIKSLTKLEEILGGAGEAIGDLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGI 357
Query: 589 VFEGFDREGKLRAICGGGRYDRLLSMFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXL 410
VFEGFDREGKLRAICGGGRYDRLLS FGGDD+PACGFGFGDAVIV
Sbjct: 358 VFEGFDREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVELLKEKGLLPELGLQ 417
Query: 409 VENIVCSLDQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRAARINADRLILVGKS 230
VENIVC+LD DLQG A+ VAT+LR+KGQ+VDLVLE+KPLKWVFKRAARINA +L+LVGK+
Sbjct: 418 VENIVCALDSDLQGAAARVATILREKGQNVDLVLEDKPLKWVFKRAARINAQKLVLVGKT 477
Query: 229 EWENGMVGVKNLATGEQYDVKLDQLE 152
EW+ GMVGVK L+TGEQY+VKLD+L+
Sbjct: 478 EWQKGMVGVKILSTGEQYEVKLDELQ 503
Score = 94.7 bits (234), Expect(2) = 0.0
Identities = 59/129 (45%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Frame = -3
Query: 1748 LHQKFNLYIKP-----TSFFHFSKTPFLQNFSKPLYPLHFSFYKYTILQKPRYHCXXXXX 1584
LH +F+L+IKP T F H S +P + +YP S + C
Sbjct: 8 LHIRFSLHIKPIFLSFTRFSHSSLSP--RKLPLSIYPRTLSSIASSYSPIDNVTCGAG-- 63
Query: 1583 XXXXXXXXVEGGRSGSLSQSP--VFESREKIDVNPPKGTRDFAPEDMRLRSWLFQNFREV 1410
GGRSG L+ P + E EKIDVNPPKGTRDF PE+MRLR+WLF NFREV
Sbjct: 64 ----------GGRSGGLTSPPPVLEEPIEKIDVNPPKGTRDFPPEEMRLRNWLFNNFREV 113
Query: 1409 SQLFGFEEV 1383
S+L+GFEEV
Sbjct: 114 SKLYGFEEV 122
>ref|XP_004143277.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
Length = 507
Score = 616 bits (1588), Expect(2) = 0.0
Identities = 302/386 (78%), Positives = 341/386 (88%)
Frame = -1
Query: 1309 GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSV 1130
GFEEVD+PVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKS+
Sbjct: 122 GFEEVDYPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSL 181
Query: 1129 PLPLKWFAIGQCWXXXXXXXXXXREHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITS 950
LP+KWFAIGQCW REHYQWNMDI+GVP VTAEAEL+SSIVTFFK++GIT+
Sbjct: 182 SLPIKWFAIGQCWRYERMTRGRRREHYQWNMDILGVPGVTAEAELLSSIVTFFKKVGITA 241
Query: 949 SDVGFRVSSRKVLQEVLRCYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGISEEAIE 770
SDVGF+VSSRKVLQ+VL+CY +P+N+F KVCIIIDK+EKIP D++K++LK G+SE+AIE
Sbjct: 242 SDVGFKVSSRKVLQDVLKCYGIPQNMFGKVCIIIDKIEKIPLDEMKKELKVVGVSEDAIE 301
Query: 769 ELLQVLSIKSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGI 590
ELLQVLS+KSL+KLEE+LG G+A+S+LK LFSLA+KFGYSDWIQFDAS+VRGLAYYTGI
Sbjct: 302 ELLQVLSVKSLTKLEEVLGGGGEALSDLKQLFSLAEKFGYSDWIQFDASIVRGLAYYTGI 361
Query: 589 VFEGFDREGKLRAICGGGRYDRLLSMFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXL 410
VFEGFDR GKLRAICGGGRYDRLLS FGGDDIPACGFGFGDAVIV
Sbjct: 362 VFEGFDRGGKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVELLKEKKLLPELNAE 421
Query: 409 VENIVCSLDQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRAARINADRLILVGKS 230
VENIVC+LD DLQG AS VAT+LR+KGQ+VDLVLENKPLKWVFKRA RINA RLILVG S
Sbjct: 422 VENIVCALDPDLQGAASKVATILREKGQTVDLVLENKPLKWVFKRATRINARRLILVGSS 481
Query: 229 EWENGMVGVKNLATGEQYDVKLDQLE 152
EWE GMVGVK+L++GEQ DVKLD+L+
Sbjct: 482 EWERGMVGVKDLSSGEQRDVKLDELD 507
Score = 96.7 bits (239), Expect(2) = 0.0
Identities = 59/134 (44%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = -3
Query: 1775 MAANATHLILHQ-KFNLYIKPTSFFHFSKTPFLQNFSKPLYPLHFSFYKYTILQKPRYHC 1599
MAA + L++ Q NL +KP F FS + + L F F K + +H
Sbjct: 1 MAAKPSSLLIFQPSLNLRLKP---FIFSSSSLAFSII-----LRFPFPKPSFFLNRNFHS 52
Query: 1598 XXXXXXXXXXXXXV--EGGRSGSLSQSPVFESREKIDVNPPKGTRDFAPEDMRLRSWLFQ 1425
GGRSG+LS +P E ++IDVNPPKGTRDF PEDMRLR+WLF
Sbjct: 53 SLTAVSSAQSVSDGGTTGGRSGALSPAPTTEELQRIDVNPPKGTRDFPPEDMRLRNWLFN 112
Query: 1424 NFREVSQLFGFEEV 1383
NFREVS+++GFEEV
Sbjct: 113 NFREVSRVYGFEEV 126
>ref|XP_004156273.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
Length = 507
Score = 614 bits (1583), Expect(2) = 0.0
Identities = 301/386 (77%), Positives = 340/386 (88%)
Frame = -1
Query: 1309 GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSV 1130
GFEEVD+PVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKS+
Sbjct: 122 GFEEVDYPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSL 181
Query: 1129 PLPLKWFAIGQCWXXXXXXXXXXREHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITS 950
LP+KWFAIGQCW REHYQWNMDI+GVP VTAEAEL+SSIVTFFK++GIT+
Sbjct: 182 SLPIKWFAIGQCWRYERMTRGRRREHYQWNMDILGVPGVTAEAELLSSIVTFFKKVGITA 241
Query: 949 SDVGFRVSSRKVLQEVLRCYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGISEEAIE 770
SDVGF+VSSRKVLQ+VL+CY +P+N+F KVCIIID +EKIP D++K++LK G+SE+AIE
Sbjct: 242 SDVGFKVSSRKVLQDVLKCYGIPQNMFGKVCIIIDNIEKIPLDEMKKELKVVGVSEDAIE 301
Query: 769 ELLQVLSIKSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGI 590
ELLQVLS+KSL+KLEE+LG G+A+S+LK LFSLA+KFGYSDWIQFDAS+VRGLAYYTGI
Sbjct: 302 ELLQVLSVKSLTKLEEVLGGGGEALSDLKQLFSLAEKFGYSDWIQFDASIVRGLAYYTGI 361
Query: 589 VFEGFDREGKLRAICGGGRYDRLLSMFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXL 410
VFEGFDR GKLRAICGGGRYDRLLS FGGDDIPACGFGFGDAVIV
Sbjct: 362 VFEGFDRGGKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVELLKEKKLLPELNAE 421
Query: 409 VENIVCSLDQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRAARINADRLILVGKS 230
VENIVC+LD DLQG AS VAT+LR+KGQ+VDLVLENKPLKWVFKRA RINA RLILVG S
Sbjct: 422 VENIVCALDPDLQGAASKVATILREKGQTVDLVLENKPLKWVFKRATRINARRLILVGSS 481
Query: 229 EWENGMVGVKNLATGEQYDVKLDQLE 152
EWE GMVGVK+L++GEQ DVKLD+L+
Sbjct: 482 EWERGMVGVKDLSSGEQRDVKLDELD 507
Score = 97.4 bits (241), Expect(2) = 0.0
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Frame = -3
Query: 1775 MAANATHLILHQ-KFNLYIKPTSFFHFSKTPFLQNFSKPLYPLHFSFYKYTILQKPRYHC 1599
MAA + L++ Q + NL +KP F FS + + L F F K + +H
Sbjct: 1 MAAKPSSLLIFQPRLNLRLKP---FIFSSSSLAFSII-----LRFPFPKPSFFLNRNFHS 52
Query: 1598 XXXXXXXXXXXXXV--EGGRSGSLSQSPVFESREKIDVNPPKGTRDFAPEDMRLRSWLFQ 1425
GGRSG+LS +P E ++IDVNPPKGTRDF PEDMRLR+WLF
Sbjct: 53 SLTAVSSAQSVSDGGTTGGRSGALSPAPTTEELQRIDVNPPKGTRDFPPEDMRLRNWLFN 112
Query: 1424 NFREVSQLFGFEEV 1383
NFREVS+++GFEEV
Sbjct: 113 NFREVSRVYGFEEV 126
>ref|XP_002277086.1| PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]
Length = 554
Score = 619 bits (1596), Expect(2) = 0.0
Identities = 309/386 (80%), Positives = 342/386 (88%)
Frame = -1
Query: 1309 GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSV 1130
GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKSV
Sbjct: 169 GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSV 228
Query: 1129 PLPLKWFAIGQCWXXXXXXXXXXREHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITS 950
LPLKWFA+GQCW REHYQWNMDIIGVPEV AEAELISSIVTFFKR+GIT+
Sbjct: 229 SLPLKWFAVGQCWRYERMTRGRRREHYQWNMDIIGVPEVMAEAELISSIVTFFKRVGITA 288
Query: 949 SDVGFRVSSRKVLQEVLRCYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGISEEAIE 770
SDVGF+VSSRKVLQEVLRCYS+PENLF KVC+IIDKMEKIP D+I ++LK+ G+SEEAI+
Sbjct: 289 SDVGFKVSSRKVLQEVLRCYSIPENLFGKVCVIIDKMEKIPIDEITKELKSLGMSEEAIK 348
Query: 769 ELLQVLSIKSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGI 590
+LLQVLSIKSL+KLEEILGA+G+AV++LK LFSLA+KFGYS+WIQFDASVVRGLAYYTGI
Sbjct: 349 DLLQVLSIKSLTKLEEILGAAGEAVADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGI 408
Query: 589 VFEGFDREGKLRAICGGGRYDRLLSMFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXL 410
VFEGFDREGKLRAICGGGRYDRLLS FGGDD+PACGFGFGDAVI+
Sbjct: 409 VFEGFDREGKLRAICGGGRYDRLLSTFGGDDVPACGFGFGDAVIIELLKEKGLLPELSLQ 468
Query: 409 VENIVCSLDQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRAARINADRLILVGKS 230
VENIVC+LD LQG A+ VAT LR+KGQSVDLVLE+KPLKWVFKRAAR NA RLILVG S
Sbjct: 469 VENIVCALDHYLQGAAAAVATRLREKGQSVDLVLESKPLKWVFKRAARTNAQRLILVGNS 528
Query: 229 EWENGMVGVKNLATGEQYDVKLDQLE 152
EW+ GMV VK L++GEQY++KLD+LE
Sbjct: 529 EWQRGMVSVKILSSGEQYEIKLDELE 554
Score = 92.0 bits (227), Expect(2) = 0.0
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = -3
Query: 1553 GGRSGSLSQSPVFESREKIDVNPPKGTRDFAPEDMRLRSWLFQNFREVSQLFGFEEV 1383
GGRSG++S P+ +S +KIDVNPP+GTRDF PEDMRLR+WLF +FREVS+ FGFEEV
Sbjct: 117 GGRSGAISPPPIEDSVQKIDVNPPRGTRDFPPEDMRLRNWLFNHFREVSRSFGFEEV 173
>ref|XP_002326196.1| predicted protein [Populus trichocarpa] gi|222833389|gb|EEE71866.1|
predicted protein [Populus trichocarpa]
Length = 441
Score = 592 bits (1525), Expect(2) = 0.0
Identities = 293/387 (75%), Positives = 339/387 (87%), Gaps = 1/387 (0%)
Frame = -1
Query: 1309 GFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSV 1130
GFEEVD+PVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKS+
Sbjct: 55 GFEEVDYPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSL 114
Query: 1129 PLPLKWFAIGQCWXXXXXXXXXXREHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITS 950
LPLKWFAIGQCW REHYQWNMDIIGVPEVTAEAELISSIVTFFK++GI++
Sbjct: 115 SLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVPEVTAEAELISSIVTFFKQIGISA 174
Query: 949 SDVGFRVSSRKV-LQEVLRCYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGISEEAI 773
SDVGF+V+SRKV LQE+LR YS+ ENLF+KVC+IIDK+EKIP D+IK++L + G+ +E +
Sbjct: 175 SDVGFKVNSRKVVLQEILRSYSLSENLFAKVCVIIDKIEKIPIDEIKKELNSVGMPQEGV 234
Query: 772 EELLQVLSIKSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTG 593
+LL+VLSIKSLS+LEEILG +G+A+++LK LFSLA+KFGYS+WIQFDASVVRGLAYYTG
Sbjct: 235 NKLLEVLSIKSLSELEEILGGAGEAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTG 294
Query: 592 IVFEGFDREGKLRAICGGGRYDRLLSMFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXX 413
IVFEGFDR GKLRAICGGGRYDRLLS FGGDD+PACGFGFGDAVI+
Sbjct: 295 IVFEGFDRAGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIIELLKEKGILPELIP 354
Query: 412 LVENIVCSLDQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRAARINADRLILVGK 233
VENIVC+LD DLQG A+ VAT+LR+KGQSVDLVLE+KPLKWVFKRAARINA RLILVG
Sbjct: 355 QVENIVCALDHDLQGAAATVATMLREKGQSVDLVLESKPLKWVFKRAARINAQRLILVGN 414
Query: 232 SEWENGMVGVKNLATGEQYDVKLDQLE 152
+EW+ GMV VK L++GEQ ++K+D+LE
Sbjct: 415 TEWKKGMVSVKILSSGEQSEIKIDELE 441
Score = 89.0 bits (219), Expect(2) = 0.0
Identities = 44/58 (75%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Frame = -3
Query: 1553 GGRSGSLSQSPVFE-SREKIDVNPPKGTRDFAPEDMRLRSWLFQNFREVSQLFGFEEV 1383
G RS +L+ PV E S +KIDVNPPKGTRDF PE+MRLRSWLF NFREVS+LFGFEEV
Sbjct: 2 GERSAALAGPPVLENSVQKIDVNPPKGTRDFPPEEMRLRSWLFHNFREVSRLFGFEEV 59