BLASTX nr result
ID: Coptis25_contig00016060
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016060 (221 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus] 66 3e-09 ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29... 66 3e-09 ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|1... 59 3e-07 ref|XP_002525701.1| membrin, putative [Ricinus communis] gi|2235... 59 4e-07 ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago... 56 4e-06 >ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus] Length = 228 Score = 66.2 bits (160), Expect = 3e-09 Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 7/63 (11%) Frame = +3 Query: 54 TLSEIYKNSQRLKIRVRSGIEKLEELEF-------TPELSYSINKDIDQIRSLSADMERL 212 TLSEIY++++RL +R R G+EKLE LE+ +PELS+SI KDI QI+SL +M+RL Sbjct: 11 TLSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELSFSIKKDITQIQSLCVEMDRL 70 Query: 213 SRS 221 RS Sbjct: 71 WRS 73 >ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 66.2 bits (160), Expect = 3e-09 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 7/64 (10%) Frame = +3 Query: 51 TTLSEIYKNSQRLKIRVRSGIEKLEELEF-------TPELSYSINKDIDQIRSLSADMER 209 TT SEIY+NS++L +R R G+E+LE LEF +PEL++++ KDI QI+SL +M+R Sbjct: 6 TTFSEIYQNSKKLLLRTRDGLERLERLEFSSSNPVDSPELAFAVKKDISQIQSLCVEMDR 65 Query: 210 LSRS 221 L RS Sbjct: 66 LWRS 69 >ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|118486425|gb|ABK95052.1| unknown [Populus trichocarpa] gi|222857559|gb|EEE95106.1| predicted protein [Populus trichocarpa] Length = 225 Score = 59.3 bits (142), Expect = 3e-07 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 8/64 (12%) Frame = +3 Query: 54 TLSEIYKNSQRLKIRVRSGIEKLEELEFT--------PELSYSINKDIDQIRSLSADMER 209 TLSEIY+++++L +R + GIE+LE LE + PELS+ + KDI Q+ SL ADM+R Sbjct: 7 TLSEIYQSAKKLLMRAQDGIERLERLENSTSSGGLDSPELSFVVKKDISQVLSLCADMDR 66 Query: 210 LSRS 221 L RS Sbjct: 67 LWRS 70 >ref|XP_002525701.1| membrin, putative [Ricinus communis] gi|223535001|gb|EEF36684.1| membrin, putative [Ricinus communis] Length = 229 Score = 58.9 bits (141), Expect = 4e-07 Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 8/64 (12%) Frame = +3 Query: 54 TLSEIYKNSQRLKIRVRSGIEKLEELEFT--------PELSYSINKDIDQIRSLSADMER 209 TLSEI+++S++ +R R GIE+LE LE + PELS+++ KDI QI+SL A+++R Sbjct: 11 TLSEIFQSSKKALLRARDGIERLERLENSTSNGGLDSPELSFAVKKDISQIQSLCAELDR 70 Query: 210 LSRS 221 L RS Sbjct: 71 LWRS 74 >ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago truncatula] gi|355518672|gb|AET00296.1| Golgi SNAP receptor complex member [Medicago truncatula] Length = 222 Score = 55.8 bits (133), Expect = 4e-06 Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 5/61 (8%) Frame = +3 Query: 54 TLSEIYKNSQRLKIRVRSGIEKLEELEF-----TPELSYSINKDIDQIRSLSADMERLSR 218 T SEI++ +++L +R R G+E+LE LE+ + +LS++++KDI QI+SL +M +LSR Sbjct: 7 TFSEIHQTARKLLLRTRDGLERLERLEYSNSSSSSDLSFAVSKDITQIQSLCVEMSQLSR 66 Query: 219 S 221 S Sbjct: 67 S 67