BLASTX nr result
ID: Coptis25_contig00016059
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016059 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus] 70 1e-10 ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29... 70 1e-10 ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|1... 65 7e-09 ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago... 64 1e-08 gb|ACJ84121.1| unknown [Medicago truncatula] gi|388515601|gb|AFK... 64 1e-08 >ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus] Length = 228 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/59 (57%), Positives = 49/59 (83%), Gaps = 2/59 (3%) Frame = +2 Query: 47 LSEIYQNSQRLKIRVRSGIERLEQLEFTSAP--STPELSYSINKDIDQIRSLCADMERL 217 LSEIYQ+++RL +R R G+E+LE+LE+++A +PELS+SI KDI QI+SLC +M+RL Sbjct: 12 LSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELSFSIKKDITQIQSLCVEMDRL 70 >ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 70.5 bits (171), Expect = 1e-10 Identities = 33/58 (56%), Positives = 48/58 (82%), Gaps = 2/58 (3%) Frame = +2 Query: 50 SEIYQNSQRLKIRVRSGIERLEQLEFTSA--PSTPELSYSINKDIDQIRSLCADMERL 217 SEIYQNS++L +R R G+ERLE+LEF+S+ +PEL++++ KDI QI+SLC +M+RL Sbjct: 9 SEIYQNSKKLLLRTRDGLERLERLEFSSSNPVDSPELAFAVKKDISQIQSLCVEMDRL 66 >ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|118486425|gb|ABK95052.1| unknown [Populus trichocarpa] gi|222857559|gb|EEE95106.1| predicted protein [Populus trichocarpa] Length = 225 Score = 64.7 bits (156), Expect = 7e-09 Identities = 32/60 (53%), Positives = 47/60 (78%), Gaps = 3/60 (5%) Frame = +2 Query: 47 LSEIYQNSQRLKIRVRSGIERLEQLEFTSAPS---TPELSYSINKDIDQIRSLCADMERL 217 LSEIYQ++++L +R + GIERLE+LE +++ +PELS+ + KDI Q+ SLCADM+RL Sbjct: 8 LSEIYQSAKKLLMRAQDGIERLERLENSTSSGGLDSPELSFVVKKDISQVLSLCADMDRL 67 >ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago truncatula] gi|355518672|gb|AET00296.1| Golgi SNAP receptor complex member [Medicago truncatula] Length = 222 Score = 64.3 bits (155), Expect = 1e-08 Identities = 27/56 (48%), Positives = 47/56 (83%) Frame = +2 Query: 50 SEIYQNSQRLKIRVRSGIERLEQLEFTSAPSTPELSYSINKDIDQIRSLCADMERL 217 SEI+Q +++L +R R G+ERLE+LE++++ S+ +LS++++KDI QI+SLC +M +L Sbjct: 9 SEIHQTARKLLLRTRDGLERLERLEYSNSSSSSDLSFAVSKDITQIQSLCVEMSQL 64 >gb|ACJ84121.1| unknown [Medicago truncatula] gi|388515601|gb|AFK45862.1| unknown [Medicago truncatula] Length = 222 Score = 64.3 bits (155), Expect = 1e-08 Identities = 27/56 (48%), Positives = 47/56 (83%) Frame = +2 Query: 50 SEIYQNSQRLKIRVRSGIERLEQLEFTSAPSTPELSYSINKDIDQIRSLCADMERL 217 SEI+Q +++L +R R G+ERLE+LE++++ S+ +LS++++KDI QI+SLC +M +L Sbjct: 9 SEIHQTARKLLLRTRDGLERLERLEYSNSSSSSDLSFAVSKDITQIQSLCVEMSQL 64