BLASTX nr result

ID: Coptis25_contig00016059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016059
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]       70   1e-10
ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29...    70   1e-10
ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|1...    65   7e-09
ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago...    64   1e-08
gb|ACJ84121.1| unknown [Medicago truncatula] gi|388515601|gb|AFK...    64   1e-08

>ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]
          Length = 228

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/59 (57%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = +2

Query: 47  LSEIYQNSQRLKIRVRSGIERLEQLEFTSAP--STPELSYSINKDIDQIRSLCADMERL 217
           LSEIYQ+++RL +R R G+E+LE+LE+++A    +PELS+SI KDI QI+SLC +M+RL
Sbjct: 12  LSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELSFSIKKDITQIQSLCVEMDRL 70


>ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3|
           unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/58 (56%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +2

Query: 50  SEIYQNSQRLKIRVRSGIERLEQLEFTSA--PSTPELSYSINKDIDQIRSLCADMERL 217
           SEIYQNS++L +R R G+ERLE+LEF+S+    +PEL++++ KDI QI+SLC +M+RL
Sbjct: 9   SEIYQNSKKLLLRTRDGLERLERLEFSSSNPVDSPELAFAVKKDISQIQSLCVEMDRL 66


>ref|XP_002319183.1| predicted protein [Populus trichocarpa] gi|118486425|gb|ABK95052.1|
           unknown [Populus trichocarpa]
           gi|222857559|gb|EEE95106.1| predicted protein [Populus
           trichocarpa]
          Length = 225

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/60 (53%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
 Frame = +2

Query: 47  LSEIYQNSQRLKIRVRSGIERLEQLEFTSAPS---TPELSYSINKDIDQIRSLCADMERL 217
           LSEIYQ++++L +R + GIERLE+LE +++     +PELS+ + KDI Q+ SLCADM+RL
Sbjct: 8   LSEIYQSAKKLLMRAQDGIERLERLENSTSSGGLDSPELSFVVKKDISQVLSLCADMDRL 67


>ref|XP_003617337.1| Golgi SNAP receptor complex member [Medicago truncatula]
           gi|355518672|gb|AET00296.1| Golgi SNAP receptor complex
           member [Medicago truncatula]
          Length = 222

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/56 (48%), Positives = 47/56 (83%)
 Frame = +2

Query: 50  SEIYQNSQRLKIRVRSGIERLEQLEFTSAPSTPELSYSINKDIDQIRSLCADMERL 217
           SEI+Q +++L +R R G+ERLE+LE++++ S+ +LS++++KDI QI+SLC +M +L
Sbjct: 9   SEIHQTARKLLLRTRDGLERLERLEYSNSSSSSDLSFAVSKDITQIQSLCVEMSQL 64


>gb|ACJ84121.1| unknown [Medicago truncatula] gi|388515601|gb|AFK45862.1| unknown
           [Medicago truncatula]
          Length = 222

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/56 (48%), Positives = 47/56 (83%)
 Frame = +2

Query: 50  SEIYQNSQRLKIRVRSGIERLEQLEFTSAPSTPELSYSINKDIDQIRSLCADMERL 217
           SEI+Q +++L +R R G+ERLE+LE++++ S+ +LS++++KDI QI+SLC +M +L
Sbjct: 9   SEIHQTARKLLLRTRDGLERLERLEYSNSSSSSDLSFAVSKDITQIQSLCVEMSQL 64


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