BLASTX nr result

ID: Coptis25_contig00016057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016057
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578719.1| PREDICTED: cystinosin homolog [Brachypodium ...    97   7e-36
gb|ABA97107.2| Lysosomal Cystine Transporter family protein, exp...   100   1e-35
ref|NP_001066568.1| Os12g0278700 [Oryza sativa Japonica Group] g...   100   1e-35
gb|ABK23234.1| unknown [Picea sitchensis]                              93   9e-35
dbj|BAJ94286.1| predicted protein [Hordeum vulgare subsp. vulgar...    97   2e-34

>ref|XP_003578719.1| PREDICTED: cystinosin homolog [Brachypodium distachyon]
          Length = 268

 Score = 97.1 bits (240), Expect(2) = 7e-36
 Identities = 42/53 (79%), Positives = 49/53 (92%)
 Frame = +3

Query: 165 SSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLT 323
           SSWNS+ LE+ YQVLGWIAFF+WS SFYPQ +LN++RKSVVGLNFDF+VLNLT
Sbjct: 3   SSWNSVGLEVFYQVLGWIAFFAWSISFYPQVILNYKRKSVVGLNFDFVVLNLT 55



 Score = 79.0 bits (193), Expect(2) = 7e-36
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +1

Query: 400 KHSSYLIYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFS 525
           KHSSYLIYNA LFFSP +Q+QYH+KYG NEMIPVA NDVAFS
Sbjct: 56  KHSSYLIYNAALFFSPVIQRQYHDKYGVNEMIPVAANDVAFS 97


>gb|ABA97107.2| Lysosomal Cystine Transporter family protein, expressed [Oryza
           sativa Japonica Group] gi|215695525|dbj|BAG90716.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 274

 Score =  100 bits (250), Expect(2) = 1e-35
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = +3

Query: 162 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLT 323
           MSSWNS+ +E+ YQVLGW+AFF+WSFSFYPQ  LNF+RKSVVGLNFDFLVLNLT
Sbjct: 1   MSSWNSVGMEVLYQVLGWVAFFAWSFSFYPQVFLNFKRKSVVGLNFDFLVLNLT 54



 Score = 73.9 bits (180), Expect(2) = 1e-35
 Identities = 34/42 (80%), Positives = 36/42 (85%)
 Frame = +1

Query: 400 KHSSYLIYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFS 525
           KHSSYLIYNA LFFSP +Q+QYHE YG  EMIPVA NDVAFS
Sbjct: 55  KHSSYLIYNAALFFSPFIQRQYHETYGDKEMIPVAANDVAFS 96


>ref|NP_001066568.1| Os12g0278700 [Oryza sativa Japonica Group]
           gi|108862476|gb|ABA97108.2| Lysosomal Cystine
           Transporter family protein, expressed [Oryza sativa
           Japonica Group] gi|113649075|dbj|BAF29587.1|
           Os12g0278700 [Oryza sativa Japonica Group]
           gi|218186660|gb|EEC69087.1| hypothetical protein
           OsI_37977 [Oryza sativa Indica Group]
           gi|222616905|gb|EEE53037.1| hypothetical protein
           OsJ_35759 [Oryza sativa Japonica Group]
          Length = 268

 Score =  100 bits (250), Expect(2) = 1e-35
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = +3

Query: 162 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLT 323
           MSSWNS+ +E+ YQVLGW+AFF+WSFSFYPQ  LNF+RKSVVGLNFDFLVLNLT
Sbjct: 1   MSSWNSVGMEVLYQVLGWVAFFAWSFSFYPQVFLNFKRKSVVGLNFDFLVLNLT 54



 Score = 73.9 bits (180), Expect(2) = 1e-35
 Identities = 34/42 (80%), Positives = 36/42 (85%)
 Frame = +1

Query: 400 KHSSYLIYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFS 525
           KHSSYLIYNA LFFSP +Q+QYHE YG  EMIPVA NDVAFS
Sbjct: 55  KHSSYLIYNAALFFSPFIQRQYHETYGDKEMIPVAANDVAFS 96


>gb|ABK23234.1| unknown [Picea sitchensis]
          Length = 272

 Score = 93.2 bits (230), Expect(2) = 9e-35
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +3

Query: 162 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLT 323
           M SWNS+PLE+ YQ+ GW AF  WS SFYPQ +LN+RRKSVVGLNFDFLV NLT
Sbjct: 1   MGSWNSVPLEVIYQIFGWFAFGVWSISFYPQLILNYRRKSVVGLNFDFLVFNLT 54



 Score = 79.0 bits (193), Expect(2) = 9e-35
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +1

Query: 400 KHSSYLIYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFS 525
           KHS+YLIYNA +FFSP VQ+QYHEKYG+NEMIPVA NDVAFS
Sbjct: 55  KHSAYLIYNASVFFSPVVQRQYHEKYGYNEMIPVAANDVAFS 96


>dbj|BAJ94286.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326508494|dbj|BAJ95769.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 275

 Score = 96.7 bits (239), Expect(2) = 2e-34
 Identities = 42/53 (79%), Positives = 48/53 (90%)
 Frame = +3

Query: 165 SSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLT 323
           SSWNS+ L + YQV+GW+AFF+WSFSFYPQ VLN+RRKSVVGLNFDFLVLN T
Sbjct: 3   SSWNSVGLGVLYQVIGWVAFFAWSFSFYPQVVLNYRRKSVVGLNFDFLVLNFT 55



 Score = 74.7 bits (182), Expect(2) = 2e-34
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +1

Query: 400 KHSSYLIYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFS 525
           KHSSYLIYNA LFFSP +QKQYH+K+G  EMIPVA NDVAFS
Sbjct: 56  KHSSYLIYNAALFFSPFIQKQYHDKFGDKEMIPVAANDVAFS 97


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