BLASTX nr result
ID: Coptis25_contig00016052
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016052 (1460 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263213.1| PREDICTED: probable replication factor C sub... 577 e-162 gb|AFK37872.1| unknown [Lotus japonicus] 570 e-160 ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2... 568 e-159 ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin... 562 e-158 ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-li... 560 e-157 >ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera] gi|296089274|emb|CBI39046.3| unnamed protein product [Vitis vinifera] Length = 354 Score = 577 bits (1488), Expect = e-162 Identities = 283/354 (79%), Positives = 308/354 (87%) Frame = -1 Query: 1340 MLWVDKYRPKSLDKMIVHEDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIVAVLRQMFG 1161 MLWVDKYRPK+LD +IVH+DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLI+A+LRQMFG Sbjct: 1 MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFG 60 Query: 1160 ASAEKVKIENKTWKVDAGXXXXXXXXXXXXXTHHVEMNPSDAGFQDRYVVQEIIKEMARN 981 SA+KVK+ENKTWK+DAG THH+E+NP DAGFQDRY+VQEIIKEMA+N Sbjct: 61 PSADKVKVENKTWKIDAGTRTIDLELTTLSSTHHMELNPGDAGFQDRYIVQEIIKEMAKN 120 Query: 980 RPIDAKGKKGYKVLVLNEVDKLSREAQNSLRRTMEKYSASCRLILCCNSSSKVMEAVRSR 801 RPID KGKKG++VLVLNEVD+LSREAQ+SLRRTMEKYSASCRLILCCNSSSKV EAVRSR Sbjct: 121 RPIDTKGKKGFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 180 Query: 800 CMNIRINAPTEEQIVTVLEFIGKKESLQLPPGFASRIAAQSNRSLRRAVLLFETCRVQQY 621 C+NIRINAPTEEQI VLEFI KKE LQLP GFA+RIA +SNRSLRRA+L FETCRVQQY Sbjct: 181 CLNIRINAPTEEQITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQY 240 Query: 620 PFTNNQAIPPMDWEQYVSEIATDIMQEQSPKRLFMVRGKLYELLINCIPPXXXXXXXXXX 441 PFTNNQA+PPMDWE+YVSEIA+DIM+EQSPKRLF VRGKLYELLINCIPP Sbjct: 241 PFTNNQAMPPMDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLE 300 Query: 440 XXXXXXXXXKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 279 KHE+CHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354 >gb|AFK37872.1| unknown [Lotus japonicus] Length = 354 Score = 570 bits (1469), Expect = e-160 Identities = 275/354 (77%), Positives = 309/354 (87%) Frame = -1 Query: 1340 MLWVDKYRPKSLDKMIVHEDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIVAVLRQMFG 1161 MLWVDKYRPK+LD+++VH+DVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLI+A+LRQMFG Sbjct: 1 MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60 Query: 1160 ASAEKVKIENKTWKVDAGXXXXXXXXXXXXXTHHVEMNPSDAGFQDRYVVQEIIKEMARN 981 +AEKVK+EN+TWKVDAG HH+EM+PSDAGFQDRYVVQEIIKEMA+N Sbjct: 61 TAAEKVKVENRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKN 120 Query: 980 RPIDAKGKKGYKVLVLNEVDKLSREAQNSLRRTMEKYSASCRLILCCNSSSKVMEAVRSR 801 RPID KGKKG+KVLVLN+VDKLSREAQ+SLRRTMEKYSA CRLILCCNSSS+V EA+RSR Sbjct: 121 RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180 Query: 800 CMNIRINAPTEEQIVTVLEFIGKKESLQLPPGFASRIAAQSNRSLRRAVLLFETCRVQQY 621 C+NIRINAP+EEQIV V+EFIGKKE LQ+P GFA+RIA +SNR+LRRA+L FETCRVQQY Sbjct: 181 CLNIRINAPSEEQIVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQY 240 Query: 620 PFTNNQAIPPMDWEQYVSEIATDIMQEQSPKRLFMVRGKLYELLINCIPPXXXXXXXXXX 441 PFTN Q IPPMDWE+Y+SEIA+DIM+EQ+PKRLF VRGKLYELLINCIPP Sbjct: 241 PFTNRQTIPPMDWEEYISEIASDIMKEQNPKRLFQVRGKLYELLINCIPPEMILKRLLFE 300 Query: 440 XXXXXXXXXKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 279 KHE+CHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK+FLIATFG Sbjct: 301 LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 354 >ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1| predicted protein [Populus trichocarpa] Length = 353 Score = 568 bits (1465), Expect = e-159 Identities = 278/354 (78%), Positives = 311/354 (87%) Frame = -1 Query: 1340 MLWVDKYRPKSLDKMIVHEDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIVAVLRQMFG 1161 MLWVDKYRPK+LD++IVH+++A+NLKKLVTEQDCPHLLFYGPSGSGKKTLI+A+LRQ+FG Sbjct: 1 MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG 60 Query: 1160 ASAEKVKIENKTWKVDAGXXXXXXXXXXXXXTHHVEMNPSDAGFQDRYVVQEIIKEMARN 981 SAEKVK+EN+TWK+DAG T+HVE++PSD GFQDRY+VQEIIKEMA+N Sbjct: 61 TSAEKVKVENRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKN 120 Query: 980 RPIDAKGKKGYKVLVLNEVDKLSREAQNSLRRTMEKYSASCRLILCCNSSSKVMEAVRSR 801 RPID KGKKGYKVLVLNEVDKLSREAQ+SLRRTMEKYSASCRLILCCNSSSKV EA+RSR Sbjct: 121 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR 180 Query: 800 CMNIRINAPTEEQIVTVLEFIGKKESLQLPPGFASRIAAQSNRSLRRAVLLFETCRVQQY 621 C+N+RINAP EEQIV VLEFIGKKE LQLPPGFA+RIA +SNRSLRRA+L FETCRVQQY Sbjct: 181 CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQY 240 Query: 620 PFTNNQAIPPMDWEQYVSEIATDIMQEQSPKRLFMVRGKLYELLINCIPPXXXXXXXXXX 441 PF++NQAIPPMDWE+YVSEI +DIM+EQSPKRLF VRGKLYELLINCIPP Sbjct: 241 PFSSNQAIPPMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINCIPP-EIILKLLSE 299 Query: 440 XXXXXXXXXKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 279 KHE+CHWAAYYEHRMR+GQKAIFH+EAFVAKFMSIYKAFLIATFG Sbjct: 300 LLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFHLEAFVAKFMSIYKAFLIATFG 353 >ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max] gi|255645652|gb|ACU23320.1| unknown [Glycine max] Length = 354 Score = 562 bits (1449), Expect = e-158 Identities = 270/354 (76%), Positives = 307/354 (86%) Frame = -1 Query: 1340 MLWVDKYRPKSLDKMIVHEDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIVAVLRQMFG 1161 MLWVDKYRPK+LD+++VH D+A+NLKKLVTEQDCPHLLFYGPSGSGKKTLI+A+LRQMFG Sbjct: 1 MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60 Query: 1160 ASAEKVKIENKTWKVDAGXXXXXXXXXXXXXTHHVEMNPSDAGFQDRYVVQEIIKEMARN 981 AEKVK++N+TWKVDAG +H+EM+PSDAGFQDRY+VQE+IKEMA+N Sbjct: 61 PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120 Query: 980 RPIDAKGKKGYKVLVLNEVDKLSREAQNSLRRTMEKYSASCRLILCCNSSSKVMEAVRSR 801 RPID KGKKG+KVLVLN+VDKLSREAQ+SLRRTMEKYSA CRLILCCNSSS+V EA+RSR Sbjct: 121 RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180 Query: 800 CMNIRINAPTEEQIVTVLEFIGKKESLQLPPGFASRIAAQSNRSLRRAVLLFETCRVQQY 621 C+N+RINAP+EEQIV VLEFIGKKE LQLPPGFA+RI +SNR+LRRA+L FETCRVQQY Sbjct: 181 CLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQY 240 Query: 620 PFTNNQAIPPMDWEQYVSEIATDIMQEQSPKRLFMVRGKLYELLINCIPPXXXXXXXXXX 441 PFTN Q IPPMDWE+Y+SEIA+DIM+EQSPKRLF VRGKLYELLINCIPP Sbjct: 241 PFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300 Query: 440 XXXXXXXXXKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 279 KHE+CHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYK+FLI+TFG Sbjct: 301 LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG 354 >ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like [Glycine max] Length = 354 Score = 560 bits (1444), Expect = e-157 Identities = 271/354 (76%), Positives = 306/354 (86%) Frame = -1 Query: 1340 MLWVDKYRPKSLDKMIVHEDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIVAVLRQMFG 1161 MLWVDKYRPK+LD+++VH D+A NLKKLVTEQD PHLLFYGPSGSGKKTLI+A+LRQMFG Sbjct: 1 MLWVDKYRPKTLDQVMVHTDIAHNLKKLVTEQDSPHLLFYGPSGSGKKTLIMALLRQMFG 60 Query: 1160 ASAEKVKIENKTWKVDAGXXXXXXXXXXXXXTHHVEMNPSDAGFQDRYVVQEIIKEMARN 981 AEKVK+EN+TWK+DAG +H+EM+PSDAGFQDRY+VQE+IKEMA+N Sbjct: 61 PGAEKVKVENRTWKIDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120 Query: 980 RPIDAKGKKGYKVLVLNEVDKLSREAQNSLRRTMEKYSASCRLILCCNSSSKVMEAVRSR 801 RPID KGKKG+KVLVLN+VDKLSREAQ+SLRRTMEKYSA CRLILCCNSSS+V EA+RSR Sbjct: 121 RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180 Query: 800 CMNIRINAPTEEQIVTVLEFIGKKESLQLPPGFASRIAAQSNRSLRRAVLLFETCRVQQY 621 C+N+RINAP+EEQIV VLEFIGKKE LQLPPGFA+RIA +SNR+LRRA+L FETCRV QY Sbjct: 181 CLNVRINAPSEEQIVQVLEFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFETCRVLQY 240 Query: 620 PFTNNQAIPPMDWEQYVSEIATDIMQEQSPKRLFMVRGKLYELLINCIPPXXXXXXXXXX 441 PFTN QAIPPMDWE+Y+SEIA+DIM+EQSPKRLF VRGKLYELLINCIPP Sbjct: 241 PFTNKQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300 Query: 440 XXXXXXXXXKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 279 KHE+CHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYK+FLIATFG Sbjct: 301 LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 354